RNA–Protein interactions for RNA: ENST00000392520.2

CIT-202, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 5,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-202ENST00000392520 MIPOL1Q8TD10 442 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 OTUD7AQ8TE49 926 aaPredicted RBP16.66■□□□□ 0.26
CIT-202ENST00000392520 TMEM63CQ9P1W3 806 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 ST5P78524 1137 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 ARHGAP24Q8N264 748 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 RFC4P35249 363 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 ZSCAN26Q16670 478 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 LETM2Q2VYF4 491 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 CFAP221Q4G0U5 840 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 DIS3L2Q8IYB7 885 aaKnown RBP16.66■□□□□ 0.26
CIT-202ENST00000392520 SMC1BQ8NDV3 1235 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 CETN3O15182 167 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 ERCC6LQ2NKX8 1250 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 PNMA8AQ86V59 439 aaPredicted RBP16.66■□□□□ 0.26
CIT-202ENST00000392520 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.66■□□□□ 0.26
CIT-202ENST00000392520 PHACTR3Q96KR7 559 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 FAM184BQ9ULE4 1060 aa16.66■□□□□ 0.26
CIT-202ENST00000392520 TTLL12Q14166 644 aaPredicted RBP16.65■□□□□ 0.26
CIT-202ENST00000392520 SND1Q7KZF4 910 aaKnown RBP eCLIP16.65■□□□□ 0.26
CIT-202ENST00000392520 CCDC51Q96ER9 411 aa16.65■□□□□ 0.26
CIT-202ENST00000392520 PPP1R12CQ9BZL4 782 aa16.65■□□□□ 0.26
CIT-202ENST00000392520 ZNF354CQ86Y25 554 aa16.65■□□□□ 0.26
CIT-202ENST00000392520 IQCDQ96DY2 449 aa16.65■□□□□ 0.26
CIT-202ENST00000392520 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
CIT-202ENST00000392520 MRPL12P52815 198 aaKnown RBP16.65■□□□□ 0.26
CIT-202ENST00000392520 MCUR1Q96AQ8 359 aa16.65■□□□□ 0.26
CIT-202ENST00000392520 MBD4O95243 580 aa16.64■□□□□ 0.26
CIT-202ENST00000392520 PICALMQ13492 652 aa16.64■□□□□ 0.26
CIT-202ENST00000392520 SETDB2Q96T68 719 aa16.64■□□□□ 0.26
CIT-202ENST00000392520 MAK16Q9BXY0 300 aaKnown RBP16.64■□□□□ 0.26
CIT-202ENST00000392520 PARP1P09874 1014 aaKnown RBP16.64■□□□□ 0.25
CIT-202ENST00000392520 MTX1Q13505 466 aa16.64■□□□□ 0.25
CIT-202ENST00000392520 CCDC84Q86UT8 332 aaPredicted RBP16.64■□□□□ 0.25
CIT-202ENST00000392520 EIF2AK4Q9P2K8 1649 aaKnown RBP16.64■□□□□ 0.25
CIT-202ENST00000392520 B4E1Z4 1266 aa16.64■□□□□ 0.25
CIT-202ENST00000392520 ARID4AP29374 1257 aaPredicted RBP16.64■□□□□ 0.25
CIT-202ENST00000392520 GMNNO75496 209 aa16.64■□□□□ 0.25
CIT-202ENST00000392520 POSTNQ15063 836 aa16.64■□□□□ 0.25
CIT-202ENST00000392520 RPUSD2Q8IZ73 545 aaKnown RBP16.64■□□□□ 0.25
CIT-202ENST00000392520 TM6SF1Q9BZW5 370 aa16.64■□□□□ 0.25
CIT-202ENST00000392520 VCXQ9H320 206 aa16.64■□□□□ 0.25
CIT-202ENST00000392520 PLCB1Q9NQ66 1216 aa16.64■□□□□ 0.25
CIT-202ENST00000392520 KDM5BQ9UGL1 1544 aa16.64■□□□□ 0.25
CIT-202ENST00000392520 KIF3CO14782 793 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 CEP104O60308 925 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 RNASE9P60153 205 aaKnown RBP16.63■□□□□ 0.25
CIT-202ENST00000392520 PPP2R5BQ15173 497 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 UAP1Q16222 522 aaPredicted RBP16.63■□□□□ 0.25
CIT-202ENST00000392520 NCOA5Q9HCD5 579 aaKnown RBP16.63■□□□□ 0.25
CIT-202ENST00000392520 DDX21Q9NR30 783 aaKnown RBP eCLIP16.63■□□□□ 0.25
CIT-202ENST00000392520 SARNPP82979 210 aaKnown RBP16.63■□□□□ 0.25
CIT-202ENST00000392520 WHAMMP3Q1A5X7 153 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 CCDC38Q502W7 563 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 ZKSCAN3Q9BRR0 538 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 NIP7Q9Y221 180 aaKnown RBP eCLIP16.63■□□□□ 0.25
CIT-202ENST00000392520 IRS4O14654 1257 aaPredicted RBP16.63■□□□□ 0.25
CIT-202ENST00000392520 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 GKAP1Q5VSY0 366 aaPredicted RBP16.63■□□□□ 0.25
CIT-202ENST00000392520 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 TTC38Q5R3I4 469 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 SYCE1Q8N0S2 351 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
CIT-202ENST00000392520 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 WDR44Q5JSH3 913 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 CCDC62Q6P9F0 684 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 APPBP2Q92624 585 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 SLF1Q9BQI6 1058 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 XPO4Q9C0E2 1151 aaKnown RBP16.63■□□□□ 0.25
CIT-202ENST00000392520 NUCKS1Q9H1E3 243 aaKnown RBP16.63■□□□□ 0.25
CIT-202ENST00000392520 MAPK8IP1Q9UQF2 711 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
CIT-202ENST00000392520 B4DLN1 442 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 HAUS3Q68CZ6 603 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 CDC37L1Q7L3B6 337 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 FCHSD1Q86WN1 690 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 TAB2Q9NYJ8 693 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 PIK3AP1Q6ZUJ8 805 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 EYA2O00167 538 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 CALUO43852 315 aaPredicted RBP16.62■□□□□ 0.25
CIT-202ENST00000392520 HSPA1LP34931 641 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 VPS52Q8N1B4 723 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 ARHGEF2Q92974 986 aaKnown RBP16.62■□□□□ 0.25
CIT-202ENST00000392520 FAM204AQ9H8W3 233 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 STX10O60499 249 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 RPS6KA1Q15418 735 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 SAR1BQ9Y6B6 198 aa16.62■□□□□ 0.25
CIT-202ENST00000392520 GPATCH8Q9UKJ3 1502 aaKnown RBP16.61■□□□□ 0.25
CIT-202ENST00000392520 FLOT1O75955 427 aa16.61■□□□□ 0.25
CIT-202ENST00000392520 CARD14Q9BXL6 1004 aa16.61■□□□□ 0.25
CIT-202ENST00000392520 TRIM31Q9BZY9 425 aa16.61■□□□□ 0.25
CIT-202ENST00000392520 RABEP2Q9H5N1 569 aa16.61■□□□□ 0.25
CIT-202ENST00000392520 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
CIT-202ENST00000392520 E7EVH7 732 aa16.61■□□□□ 0.25
CIT-202ENST00000392520 MAP2K2P36507 400 aa16.61■□□□□ 0.25
CIT-202ENST00000392520 ZNF131P52739 623 aa16.61■□□□□ 0.25
CIT-202ENST00000392520 MRPS9P82933 396 aaKnown RBP16.61■□□□□ 0.25
CIT-202ENST00000392520 PLS1Q14651 629 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms