RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 CD209Q9NNX6 404 aa23.25■■□□□ 1.31
CSNK1D-203ENST00000392334 DOCK2Q92608 1830 aa23.24■■□□□ 1.31
CSNK1D-203ENST00000392334 ZNF830Q96NB3 372 aaPredicted RBP23.24■■□□□ 1.31
CSNK1D-203ENST00000392334 CD2APQ9Y5K6 639 aa23.24■■□□□ 1.31
CSNK1D-203ENST00000392334 SLC4A4Q9Y6R1 1079 aa23.24■■□□□ 1.31
CSNK1D-203ENST00000392334 ZNF213O14771 459 aa23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 DYNLL1P63167 89 aaKnown RBP23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 CDC37L1Q7L3B6 337 aa23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 NLGN2Q8NFZ4 835 aa23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 NSUN4Q96CB9 384 aaKnown RBP23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 SCAND2PQ9GZW5 306 aaPredicted RBP23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 PIM2Q9P1W9 311 aa23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 AP5Z1O43299 807 aa23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 BRCA1P38398 1863 aaKnown RBP23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 TOB2Q14106 344 aaPredicted RBP23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 GRIK5Q16478 980 aa23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 FAM200AQ8TCP9 573 aa23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 EPB41L4AQ9HCS5 686 aaPredicted RBP23.23■■□□□ 1.31
CSNK1D-203ENST00000392334 MYH13Q9UKX3 1938 aa23.22■■□□□ 1.31
CSNK1D-203ENST00000392334 MAGEB6P1A0A0J9YX57 407 aa23.22■■□□□ 1.31
CSNK1D-203ENST00000392334 PATL2C9JE40 543 aaKnown RBP23.22■■□□□ 1.31
CSNK1D-203ENST00000392334 MAP3K11Q16584 847 aa23.22■■□□□ 1.31
CSNK1D-203ENST00000392334 DNTTIP2Q5QJE6 756 aaKnown RBP23.22■■□□□ 1.31
CSNK1D-203ENST00000392334 IFNL3Q8IZI9 196 aa23.22■■□□□ 1.31
CSNK1D-203ENST00000392334 SDR42E1Q8WUS8 393 aa23.22■■□□□ 1.31
CSNK1D-203ENST00000392334 NUP62CLQ9H1M0 184 aa23.22■■□□□ 1.31
CSNK1D-203ENST00000392334 GSG1L2A8MUP6 293 aa23.21■■□□□ 1.31
CSNK1D-203ENST00000392334 Q6ZUG5 572 aa23.21■■□□□ 1.31
CSNK1D-203ENST00000392334 C15orf52Q6ZUT6 534 aaKnown RBP23.21■■□□□ 1.31
CSNK1D-203ENST00000392334 GOLGA6L6A8MZA4 724 aa23.21■■□□□ 1.31
CSNK1D-203ENST00000392334 RBM43Q6ZSC3 357 aaKnown RBP23.21■■□□□ 1.31
CSNK1D-203ENST00000392334 STK11IPQ8N1F8 1099 aa23.21■■□□□ 1.31
CSNK1D-203ENST00000392334 KIAA1524Q8TCG1 905 aa23.2■■□□□ 1.3
CSNK1D-203ENST00000392334 NBPF3Q9H094 633 aa23.2■■□□□ 1.3
CSNK1D-203ENST00000392334 NAPBQ9H115 298 aa23.2■■□□□ 1.3
CSNK1D-203ENST00000392334 INCENPQ9NQS7 918 aa23.2■■□□□ 1.3
CSNK1D-203ENST00000392334 AATFQ9NY61 560 aaKnown RBP eCLIP23.2■■□□□ 1.3
CSNK1D-203ENST00000392334 SNED1Q8TER0 1413 aa23.2■■□□□ 1.3
CSNK1D-203ENST00000392334 FGD1P98174 961 aa23.2■■□□□ 1.3
CSNK1D-203ENST00000392334 STK3Q13188 491 aa23.2■■□□□ 1.3
CSNK1D-203ENST00000392334 DZIP1Q86YF9 867 aaKnown RBP23.2■■□□□ 1.3
CSNK1D-203ENST00000392334 DDX19AQ9NUU7 478 aaKnown RBP23.2■■□□□ 1.3
CSNK1D-203ENST00000392334 PDS5AQ29RF7 1337 aaKnown RBP23.19■■□□□ 1.3
CSNK1D-203ENST00000392334 DOK7Q18PE1 504 aa23.19■■□□□ 1.3
CSNK1D-203ENST00000392334 TPRNQ4KMQ1 711 aa23.19■■□□□ 1.3
CSNK1D-203ENST00000392334 DHX32Q7L7V1 743 aaKnown RBP23.19■■□□□ 1.3
CSNK1D-203ENST00000392334 RIOK1Q9BRS2 568 aaKnown RBP23.19■■□□□ 1.3
CSNK1D-203ENST00000392334 ZC3H12CQ9C0D7 883 aaKnown RBP23.19■■□□□ 1.3
CSNK1D-203ENST00000392334 MRVI1Q9Y6F6 885 aa23.19■■□□□ 1.3
CSNK1D-203ENST00000392334 CHD4Q14839 1912 aa23.19■■□□□ 1.3
CSNK1D-203ENST00000392334 LIG1P18858 919 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 TDO2P48775 406 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 TBC1D10CQ8IV04 446 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 WDR66Q8TBY9 1149 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 FBXW7Q969H0 707 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 ZMYND15Q9H091 742 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 LDHBP07195 334 aaKnown RBP23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 IL1R1P14778 569 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 CTDSPL2Q05D32 466 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 TYRO3Q06418 890 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 DALRD3Q5D0E6 543 aaKnown RBP23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 NKX2-3Q8TAU0 364 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 BRF1Q92994 677 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 FHDC1Q9C0D6 1143 aaPredicted RBP23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 KCNF1Q9H3M0 494 aa23.18■■□□□ 1.3
CSNK1D-203ENST00000392334 DIXDC1Q155Q3 683 aa23.17■■□□□ 1.3
CSNK1D-203ENST00000392334 HMGB1P09429 215 aaKnown RBP23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 GNAT2P19087 354 aa23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 GTF2IP78347 998 aa23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 CCDC93Q567U6 631 aa23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 CC2D2BQ6DHV5 1058 aa23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 FERMT3Q86UX7 667 aa23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 LEO1Q8WVC0 666 aaPredicted RBP23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 SPATA32Q96LK8 384 aa23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 RTFDC1Q9BY42 306 aaPredicted RBP23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 GPHNQ9NQX3 736 aaPredicted RBP23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 BCS1LQ9Y276 419 aa23.16■■□□□ 1.3
CSNK1D-203ENST00000392334 SMIM22K7EJ46 135 aa23.15■■□□□ 1.3
CSNK1D-203ENST00000392334 EXOSC10Q01780 885 aaKnown RBP23.15■■□□□ 1.3
CSNK1D-203ENST00000392334 SPTY2D1Q68D10 685 aaPredicted RBP23.15■■□□□ 1.3
CSNK1D-203ENST00000392334 GTF3C6Q969F1 213 aa23.15■■□□□ 1.3
CSNK1D-203ENST00000392334 NACAP1Q9BZK3 213 aa23.15■■□□□ 1.3
CSNK1D-203ENST00000392334 CLSTN2Q9H4D0 955 aa23.15■■□□□ 1.3
CSNK1D-203ENST00000392334 MFSD14BQ5SR56 506 aa23.15■■□□□ 1.3
CSNK1D-203ENST00000392334 TNMDQ9H2S6 317 aa23.15■■□□□ 1.3
CSNK1D-203ENST00000392334 ALX1Q15699 326 aa23.14■■□□□ 1.29
CSNK1D-203ENST00000392334 AOC3Q16853 763 aa23.14■■□□□ 1.29
CSNK1D-203ENST00000392334 RALYLQ86SE5 291 aaKnown RBP23.14■■□□□ 1.29
CSNK1D-203ENST00000392334 NCOA7Q8NI08 942 aa23.14■■□□□ 1.29
CSNK1D-203ENST00000392334 DBNDD1Q9H9R9 158 aa23.14■■□□□ 1.29
CSNK1D-203ENST00000392334 SALL1Q9NSC2 1324 aa23.14■■□□□ 1.29
CSNK1D-203ENST00000392334 MINDY4BA8MYZ0 360 aa23.13■■□□□ 1.29
CSNK1D-203ENST00000392334 G3V3G9 751 aa23.13■■□□□ 1.29
CSNK1D-203ENST00000392334 PLCB2Q00722 1185 aa23.13■■□□□ 1.29
CSNK1D-203ENST00000392334 APOBRQ0VD83 1088 aa23.13■■□□□ 1.29
CSNK1D-203ENST00000392334 DCAF8Q5TAQ9 597 aa23.13■■□□□ 1.29
CSNK1D-203ENST00000392334 C17orf53Q8N3J3 647 aaPredicted RBP23.13■■□□□ 1.29
CSNK1D-203ENST00000392334 EYA3Q99504 573 aa23.13■■□□□ 1.29
CSNK1D-203ENST00000392334 DACT1Q9NYF0 836 aa23.13■■□□□ 1.29
CSNK1D-203ENST00000392334 NAP1L2Q9ULW6 460 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms