RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 SYCP1Q15431 976 aa18.85■□□□□ 0.61
SNX9-201ENST00000392185 CELF1Q92879 486 aaKnown RBP18.85■□□□□ 0.61
SNX9-201ENST00000392185 RBM28Q9NW13 759 aaKnown RBP18.85■□□□□ 0.61
SNX9-201ENST00000392185 GNA11P29992 359 aa18.85■□□□□ 0.61
SNX9-201ENST00000392185 TBC1D9BQ66K14 1250 aa18.85■□□□□ 0.61
SNX9-201ENST00000392185 KRI1Q8N9T8 703 aaKnown RBP18.85■□□□□ 0.61
SNX9-201ENST00000392185 GJD4Q96KN9 370 aaPredicted RBP18.85■□□□□ 0.61
SNX9-201ENST00000392185 GPHNQ9NQX3 736 aaPredicted RBP18.85■□□□□ 0.61
SNX9-201ENST00000392185 CCP110O43303 1012 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 MATR3P43243 847 aaKnown RBP eCLIP18.84■□□□□ 0.611e-6■■■■□ 21.9
SNX9-201ENST00000392185 ARHGAP29Q52LW3 1261 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 CLEC4GQ6UXB4 293 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 RICTORQ6R327 1708 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 CYP2D7A0A087X1C5 515 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 AMPD3Q01432 767 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 DIXDC1Q155Q3 683 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 LCORLQ8N3X6 602 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 ARHGEF1Q92888 912 aaKnown RBP18.84■□□□□ 0.61
SNX9-201ENST00000392185 TTC12Q9H892 705 aaPredicted RBP18.84■□□□□ 0.61
SNX9-201ENST00000392185 LARGE1O95461 756 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 TCERG1LQ5VWI1 586 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 JAKMIP3Q5VZ66 844 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 ZNF772Q68DY9 489 aaPredicted RBP18.84■□□□□ 0.61
SNX9-201ENST00000392185 FLAD1Q8NFF5 587 aa18.84■□□□□ 0.61
SNX9-201ENST00000392185 C16orf45Q96MC5 204 aaPredicted RBP18.84■□□□□ 0.61
SNX9-201ENST00000392185 XDHP47989 1333 aa18.83■□□□□ 0.61
SNX9-201ENST00000392185 MMP10P09238 476 aa18.83■□□□□ 0.61
SNX9-201ENST00000392185 CCDC186Q7Z3E2 898 aa18.83■□□□□ 0.61
SNX9-201ENST00000392185 RBSNQ9H1K0 784 aa18.83■□□□□ 0.61
SNX9-201ENST00000392185 BCS1LQ9Y276 419 aa18.83■□□□□ 0.61
SNX9-201ENST00000392185 IQSEC2Q5JU85 1478 aa18.83■□□□□ 0.61
SNX9-201ENST00000392185 PDIA3P30101 505 aaKnown RBP18.83■□□□□ 0.6
SNX9-201ENST00000392185 BTDP43251 543 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 SCRN1Q12765 414 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 TRIM47Q96LD4 638 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 TMEM63CQ9P1W3 806 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 NARFQ9UHQ1 456 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 KDM4FA0A1W2PPD8 638 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 SPDYE3A6NKU9 549 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 ASIC1P78348 528 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 ODF2Q5BJF6 829 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 RILPL1Q5EBL4 403 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 FCHSD1Q86WN1 690 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 TEKT1Q969V4 418 aa18.83■□□□□ 0.6
SNX9-201ENST00000392185 ZNF274Q96GC6 653 aaPredicted RBP18.83■□□□□ 0.6
SNX9-201ENST00000392185 N4BP3O15049 544 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 CHGBP05060 677 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 FOXO4P98177 505 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 PRKG1Q13976 671 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 DBNDD1Q9H9R9 158 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 CLEC11AQ9Y240 323 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 CEMIPQ8WUJ3 1361 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 NECTIN1Q15223 517 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 DTHD1Q6ZMT9 781 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 COL15A1P39059 1388 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 HSPA1LP34931 641 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 UBASH3AP57075 661 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 PDIA6Q15084 440 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 UVSSAQ2YD98 709 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 NUP88Q99567 741 aaPredicted RBP18.82■□□□□ 0.6
SNX9-201ENST00000392185 TSG101Q99816 390 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 TMX1Q9H3N1 280 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 PFKFB2O60825 505 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 CAVIN2O95810 425 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 FAM160A1Q05DH4 1040 aa18.82■□□□□ 0.6
SNX9-201ENST00000392185 SLC1A4P43007 532 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 SCARF1Q14162 830 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 PLS1Q14651 629 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 PPP4R3BQ5MIZ7 849 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 FKBP15Q5T1M5 1219 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 CACNA2D4Q7Z3S7 1137 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 USP28Q96RU2 1077 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 EHMT1Q9H9B1 1298 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 PAXIP1Q6ZW49 1069 aaPredicted RBP18.81■□□□□ 0.6
SNX9-201ENST00000392185 FANCBQ8NB91 859 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 GOLGA8HP0CJ92 632 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 PTPN14Q15678 1187 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 EXOC1Q9NV70 894 aa18.81■□□□□ 0.6
SNX9-201ENST00000392185 ARPP21Q9UBL0 812 aaPredicted RBP18.81■□□□□ 0.6
SNX9-201ENST00000392185 DLGAP5Q15398 846 aa18.8■□□□□ 0.6
SNX9-201ENST00000392185 CCDC40Q4G0X9 1142 aa18.8■□□□□ 0.6
SNX9-201ENST00000392185 KIAA1328Q86T90 577 aa18.8■□□□□ 0.6
SNX9-201ENST00000392185 ARGLU1Q9NWB6 273 aaPredicted RBP18.8■□□□□ 0.6
SNX9-201ENST00000392185 LEMD3Q9Y2U8 911 aa18.8■□□□□ 0.6
SNX9-201ENST00000392185 MAP2P11137 1827 aaKnown RBP18.8■□□□□ 0.6
SNX9-201ENST00000392185 CYP2E1P05181 493 aaPredicted RBP18.8■□□□□ 0.6
SNX9-201ENST00000392185 POLR1AO95602 1720 aaPredicted RBP18.8■□□□□ 0.6
SNX9-201ENST00000392185 STAMQ92783 540 aa18.8■□□□□ 0.6
SNX9-201ENST00000392185 RGS12O14924 1447 aa18.8■□□□□ 0.6
SNX9-201ENST00000392185 TRIM28Q13263 835 aaKnown RBP18.79■□□□□ 0.6
SNX9-201ENST00000392185 ARHGEF28Q8N1W1 1705 aaKnown RBP18.79■□□□□ 0.6
SNX9-201ENST00000392185 MYSM1Q5VVJ2 828 aa18.79■□□□□ 0.6
SNX9-201ENST00000392185 PNMA1Q8ND90 353 aa18.79■□□□□ 0.6
SNX9-201ENST00000392185 ZSCAN10Q96SZ4 725 aaPredicted RBP18.79■□□□□ 0.6
SNX9-201ENST00000392185 BTBD18B2RXH4 712 aa18.79■□□□□ 0.6
SNX9-201ENST00000392185 PPEF1O14829 653 aaPredicted RBP18.79■□□□□ 0.6
SNX9-201ENST00000392185 SPATA31A1Q5TZJ5 1347 aa18.79■□□□□ 0.6
SNX9-201ENST00000392185 PPP1R12BO60237 982 aaPredicted RBP18.78■□□□□ 0.6
SNX9-201ENST00000392185 BBOX1O75936 387 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms