RNA–Protein interactions for RNA: ENST00000392045.7

SP140-203, Transcript of SP140 nuclear body protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SP140, Length 3,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-203ENST00000392045 BICD2Q8TD16 824 aa9.24□□□□□ -0.93
SP140-203ENST00000392045 AK7Q96M32 723 aa9.24□□□□□ -0.93
SP140-203ENST00000392045 NUB1Q9Y5A7 615 aa9.24□□□□□ -0.93
SP140-203ENST00000392045 CTDNEP1O95476 244 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 MAP2K2P36507 400 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 CASP7P55210 303 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 EXOSC10Q01780 885 aaKnown RBP9.23□□□□□ -0.93
SP140-203ENST00000392045 TFCP2Q12800 502 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 C11orf91Q3C1V1 193 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 STOX1Q6ZVD7 989 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 APBB1IPQ7Z5R6 666 aaPredicted RBP9.23□□□□□ -0.93
SP140-203ENST00000392045 SDR16C5Q8N3Y7 309 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 ENGASEQ8NFI3 743 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 CACTINQ8WUQ7 758 aaKnown RBP9.23□□□□□ -0.93
SP140-203ENST00000392045 FOXD4Q12950 439 aaPredicted RBP9.23□□□□□ -0.93
SP140-203ENST00000392045 STX1AQ16623 288 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 TXNRD1Q16881 649 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 KIF6Q6ZMV9 814 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 LRRC8AQ8IWT6 810 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 DHX40Q8IX18 779 aaKnown RBP9.23□□□□□ -0.93
SP140-203ENST00000392045 PROM2Q8N271 834 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 ANKRD20A12PQ8NF67 263 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 BCL9O00512 1426 aa9.23□□□□□ -0.93
SP140-203ENST00000392045 MAP9Q49MG5 647 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 C11orf57Q6ZUT1 292 aaPredicted RBP9.22□□□□□ -0.93
SP140-203ENST00000392045 NYAP1Q6ZVC0 841 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 DSCC1Q9BVC3 393 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 GOLPH3LQ9H4A5 285 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 H3BQV1 296 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 ZSCAN26Q16670 478 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 IFFO2Q5TF58 517 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 CCDC181Q5TID7 509 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 DHX32Q7L7V1 743 aaKnown RBP9.22□□□□□ -0.93
SP140-203ENST00000392045 KBTBD3Q8NAB2 608 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 C16orf45Q96MC5 204 aaPredicted RBP9.22□□□□□ -0.93
SP140-203ENST00000392045 HELLSQ9NRZ9 838 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 CCDC87Q9NVE4 849 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.22□□□□□ -0.93
SP140-203ENST00000392045 RFC4P35249 363 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 INTS5Q6P9B9 1019 aaKnown RBP9.22□□□□□ -0.93
SP140-203ENST00000392045 CCDC129Q6ZRS4 1044 aa9.22□□□□□ -0.93
SP140-203ENST00000392045 CCP110O43303 1012 aa9.21□□□□□ -0.93
SP140-203ENST00000392045 ONECUT3O60422 494 aaPredicted RBP9.21□□□□□ -0.93
SP140-203ENST00000392045 CHGBP05060 677 aa9.21□□□□□ -0.93
SP140-203ENST00000392045 ATP2B1P20020 1258 aa9.21□□□□□ -0.93
SP140-203ENST00000392045 EVCP57679 992 aa9.21□□□□□ -0.93
SP140-203ENST00000392045 DRC7Q8IY82 874 aa9.21□□□□□ -0.93
SP140-203ENST00000392045 KLHL23Q8NBE8 558 aa9.21□□□□□ -0.93
SP140-203ENST00000392045 MKL1Q969V6 931 aa9.21□□□□□ -0.93
SP140-203ENST00000392045 DDX11Q96FC9 970 aa9.21□□□□□ -0.93
SP140-203ENST00000392045 SEC62Q99442 399 aaKnown RBP9.21□□□□□ -0.93
SP140-203ENST00000392045 NIP7Q9Y221 180 aaKnown RBP eCLIP9.21□□□□□ -0.93
SP140-203ENST00000392045 ITGB4P16144 1822 aa9.21□□□□□ -0.93
SP140-203ENST00000392045 CICQ96RK0 1608 aaPredicted RBP9.21□□□□□ -0.94
SP140-203ENST00000392045 CCDC196A0A1B0GTZ2 297 aa9.21□□□□□ -0.94
SP140-203ENST00000392045 PSDA5PKW4 1024 aaPredicted RBP9.21□□□□□ -0.94
SP140-203ENST00000392045 FAM160A1Q05DH4 1040 aa9.21□□□□□ -0.94
SP140-203ENST00000392045 CCAR1Q8IX12 1150 aaKnown RBP9.21□□□□□ -0.94
SP140-203ENST00000392045 NME8Q8N427 588 aa9.21□□□□□ -0.94
SP140-203ENST00000392045 PRPF38AQ8NAV1 312 aaKnown RBP9.21□□□□□ -0.94
SP140-203ENST00000392045 DBNDD2Q9BQY9 259 aa9.21□□□□□ -0.94
SP140-203ENST00000392045 GPR108Q9NPR9 543 aa9.21□□□□□ -0.94
SP140-203ENST00000392045 RTCBQ9Y3I0 505 aaKnown RBP9.21□□□□□ -0.94
SP140-203ENST00000392045 PTPDC1A2A3K4 754 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 ZPR1O75312 459 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 CCZ1BP86790 482 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 CCZ1P86791 482 aaPredicted RBP9.2□□□□□ -0.94
SP140-203ENST00000392045 E2F4Q16254 413 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 JAKMIP3Q5VZ66 844 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 SMARCC1Q92922 1105 aaPredicted RBP9.2□□□□□ -0.94
SP140-203ENST00000392045 ZNF274Q96GC6 653 aaPredicted RBP9.2□□□□□ -0.94
SP140-203ENST00000392045 BPIFA3Q9BQP9 254 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 GOPCQ9HD26 462 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 TRMT112Q9UI30 125 aaKnown RBP9.2□□□□□ -0.94
SP140-203ENST00000392045 CTNNA3Q9UI47 895 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 NEDD4P46934 1319 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 ATRNO75882 1429 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 TTC19Q6DKK2 380 aaPredicted RBP9.2□□□□□ -0.94
SP140-203ENST00000392045 RMI1Q9H9A7 625 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 ZNF219Q9P2Y4 722 aaPredicted RBP9.2□□□□□ -0.94
SP140-203ENST00000392045 CARMIL3Q8ND23 1372 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 A0A1B0GUL7 405 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 GOLGA6L19H0YKK7 550 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 ZMYM1Q5SVZ6 1142 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 ZNF594Q96JF6 807 aaPredicted RBP9.2□□□□□ -0.94
SP140-203ENST00000392045 USP28Q96RU2 1077 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 MTA3Q9BTC8 594 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 MAF1Q9H063 256 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 NDUFB9Q9Y6M9 179 aa9.2□□□□□ -0.94
SP140-203ENST00000392045 SETSIPP0DME0 302 aa9.19□□□□□ -0.94
SP140-203ENST00000392045 GSCP56915 257 aaPredicted RBP9.19□□□□□ -0.94
SP140-203ENST00000392045 CEP135Q66GS9 1140 aa9.19□□□□□ -0.94
SP140-203ENST00000392045 ATG9AQ7Z3C6 839 aa9.19□□□□□ -0.94
SP140-203ENST00000392045 FMR1NBQ8N0W7 255 aaPredicted RBP9.19□□□□□ -0.94
SP140-203ENST00000392045 TBC1D22AQ8WUA7 517 aa9.19□□□□□ -0.94
SP140-203ENST00000392045 ZNF396Q96N95 335 aaPredicted RBP9.19□□□□□ -0.94
SP140-203ENST00000392045 FTOQ9C0B1 505 aaKnown RBP eCLIP9.19□□□□□ -0.94
SP140-203ENST00000392045 ANO10Q9NW15 660 aa9.19□□□□□ -0.94
SP140-203ENST00000392045 A0A1W2PQ27 194 aa9.19□□□□□ -0.94
SP140-203ENST00000392045 A0A1W2PQ64 194 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms