RNA–Protein interactions for RNA: ENST00000390458.3

TRAV29DV5-201, Transcript of T cell receptor alpha variable 29/delta variable 5 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV29DV5, Length 469 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV29DV5-201ENST00000390458 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
TRAV29DV5-201ENST00000390458 PTPN18Q99952 460 aa12.18□□□□□ -0.46
TRAV29DV5-201ENST00000390458 ZFYVE28Q9HCC9 887 aa12.18□□□□□ -0.46
TRAV29DV5-201ENST00000390458 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
TRAV29DV5-201ENST00000390458 ABCF2Q9UG63 623 aa12.18□□□□□ -0.46
TRAV29DV5-201ENST00000390458 ZNF112Q9UJU3 913 aa12.18□□□□□ -0.46
TRAV29DV5-201ENST00000390458 COL2A1P02458 1487 aaPredicted RBP12.18□□□□□ -0.46
TRAV29DV5-201ENST00000390458 LDHCP07864 332 aa12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 TCP10Q12799 353 aa12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 NFIAQ12857 509 aa12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 NOL9Q5SY16 702 aaKnown RBP12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 ITPRIPQ8IWB1 547 aa12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 BRI3BPQ8WY22 251 aa12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 R3HDMLQ9H3Y0 253 aa12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 FAM198AQ9UFP1 575 aa12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 TNNQ9UQP3 1299 aa12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 HTTP42858 3142 aa12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 ATRNL1Q5VV63 1379 aa12.17□□□□□ -0.46
TRAV29DV5-201ENST00000390458 RBBP6Q7Z6E9 1792 aaKnown RBP12.16□□□□□ -0.46
TRAV29DV5-201ENST00000390458 GPR75-ASB3A0A0A6YYF3 556 aa12.16□□□□□ -0.46
TRAV29DV5-201ENST00000390458 ATP8B2P98198 1209 aa12.16□□□□□ -0.46
TRAV29DV5-201ENST00000390458 SP3Q02447 781 aa12.16□□□□□ -0.46
TRAV29DV5-201ENST00000390458 MECOMQ03112 1051 aa12.16□□□□□ -0.46
TRAV29DV5-201ENST00000390458 OS9Q13438 667 aaPredicted RBP12.16□□□□□ -0.46
TRAV29DV5-201ENST00000390458 TAF1CQ15572 869 aaPredicted RBP12.16□□□□□ -0.46
TRAV29DV5-201ENST00000390458 ZKSCAN4Q969J2 545 aaPredicted RBP12.16□□□□□ -0.46
TRAV29DV5-201ENST00000390458 HMG20BQ9P0W2 317 aa12.16□□□□□ -0.46
TRAV29DV5-201ENST00000390458 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
TRAV29DV5-201ENST00000390458 IRF6O14896 467 aa12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 ZBTB7BO15156 539 aaPredicted RBP12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 BTDP43251 543 aa12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 RGS3P49796 1198 aa12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 TNNI3KQ59H18 835 aa12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 CCDC158Q5M9N0 1113 aa12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 MIGA2Q7L4E1 593 aa12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 OTOP1Q7RTM1 612 aa12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 ZNF512BQ96KM6 892 aaPredicted RBP12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 KCNH4Q9UQ05 1017 aa12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 NOP58Q9Y2X3 529 aaKnown RBP12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 TRIM17Q9Y577 477 aa12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 FPGT-TNNI3KV9GXZ4 949 aa12.15□□□□□ -0.46
TRAV29DV5-201ENST00000390458 SURF6O75683 361 aaKnown RBP12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 GNRH1P01148 92 aa12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 INPP5BP32019 993 aa12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 MCAMP43121 646 aa12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 MAP3K10Q02779 954 aa12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 TMED8Q6PL24 325 aaPredicted RBP12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 ZSCAN29Q8IWY8 852 aaPredicted RBP12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 FAM43AQ8N2R8 423 aa12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 NSUN4Q96CB9 384 aaKnown RBP12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 EFCC1Q9HA90 598 aa12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 TNRC18O15417 2968 aaPredicted RBP12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 FOCADQ5VW36 1801 aa12.14□□□□□ -0.47
TRAV29DV5-201ENST00000390458 CXCL11O14625 94 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 TBC1D12O60347 775 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 TLR2O60603 784 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 RLBP1P12271 317 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 PLCG2P16885 1265 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 SOX10P56693 466 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 RHBDL3P58872 404 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 HSP90AB4PQ58FF6 505 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 TTC39AQ5SRH9 613 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 ANKRD23Q86SG2 305 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 NOL10Q9BSC4 688 aaKnown RBP12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 CHMP4BQ9H444 224 aaKnown RBP12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 PICK1Q9NRD5 415 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 RAI14Q9P0K7 980 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 LRP2BPQ9P2M1 347 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 PTPRFP10586 1907 aa12.13□□□□□ -0.47
TRAV29DV5-201ENST00000390458 PHF20L1A8MW92 1017 aa12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 BTBD19C9JJ37 291 aa12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 CTNND1O60716 968 aaKnown RBP12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 BAG3O95817 575 aa12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 KIF22Q14807 665 aa12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 PI16Q6UXB8 463 aa12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 CERS3Q8IU89 383 aa12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 CD99L2Q8TCZ2 262 aa12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 PTPN22Q9Y2R2 807 aa12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 CENPFP49454 3210 aa12.12□□□□□ -0.47
TRAV29DV5-201ENST00000390458 PHIPQ8WWQ0 1821 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 CDK5RAP2Q96SN8 1893 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 PRMT2P55345 433 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 PICALMQ13492 652 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 CEP85Q6P2H3 762 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 FASTKD5Q7L8L6 764 aaKnown RBP12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 ZFPM1Q8IX07 1006 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 ZNF384Q8TF68 577 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 ARMC5Q96C12 935 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 PARK7Q99497 189 aaKnown RBP12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 DBNDD2Q9BQY9 259 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 DHX36Q9H2U1 1008 aaKnown RBP12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 C1orf115Q9H7X2 142 aa12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 DDX4Q9NQI0 724 aaKnown RBP12.11□□□□□ -0.47
TRAV29DV5-201ENST00000390458 SLC45A1Q9Y2W3 748 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms