RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 CACNA2D3Q8IZS8 1091 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 GPR161Q8N6U8 529 aaKnown RBP17.34■□□□□ 0.37
ALK-201ENST00000389048 NLRP3Q96P20 1036 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 POLKQ9UBT6 870 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 CEP104O60308 925 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 HDAC1Q13547 482 aaPredicted RBP17.34■□□□□ 0.37
ALK-201ENST00000389048 USH1GQ495M9 461 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 DZIP3Q86Y13 1208 aaKnown RBP17.34■□□□□ 0.37
ALK-201ENST00000389048 GSDMBQ8TAX9 411 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 STX10O60499 249 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 MYL5Q02045 173 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 MSANTD4Q8NCY6 345 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 TSC1Q92574 1164 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 NUF2Q9BZD4 464 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 GJA3Q9Y6H8 435 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 GUCY2FP51841 1108 aa17.33■□□□□ 0.37
ALK-201ENST00000389048 CNGA4Q8IV77 575 aa17.33■□□□□ 0.37
ALK-201ENST00000389048 ARHGEF11O15085 1522 aa17.33■□□□□ 0.37
ALK-201ENST00000389048 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.37
ALK-201ENST00000389048 CCDC141Q6ZP82 1450 aa17.33■□□□□ 0.36
ALK-201ENST00000389048 TBC1D8O95759 1140 aa17.33■□□□□ 0.36
ALK-201ENST00000389048 ZNF365Q70YC5 407 aa17.33■□□□□ 0.36
ALK-201ENST00000389048 TRMT44Q8IYL2 757 aaKnown RBP17.33■□□□□ 0.36
ALK-201ENST00000389048 ZNF408Q9H9D4 720 aa17.33■□□□□ 0.36
ALK-201ENST00000389048 KRT19P08727 400 aa17.33■□□□□ 0.36
ALK-201ENST00000389048 VSIG1Q86XK7 387 aa17.33■□□□□ 0.36
ALK-201ENST00000389048 SYNRGQ9UMZ2 1314 aa17.33■□□□□ 0.36
ALK-201ENST00000389048 HHATQ5VTY9 493 aa17.33■□□□□ 0.36
ALK-201ENST00000389048 TTC19Q6DKK2 380 aaPredicted RBP17.33■□□□□ 0.36
ALK-201ENST00000389048 IQUBQ8NA54 791 aa17.33■□□□□ 0.36
ALK-201ENST00000389048 NFATC2IPQ8NCF5 419 aa17.33■□□□□ 0.36
ALK-201ENST00000389048 CALML3P27482 149 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 CTDSPL2Q05D32 466 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 LMNTD2Q8IXW0 634 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 SMAP1Q8IYB5 467 aaPredicted RBP17.32■□□□□ 0.36
ALK-201ENST00000389048 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
ALK-201ENST00000389048 DACT3Q96B18 629 aaPredicted RBP17.32■□□□□ 0.36
ALK-201ENST00000389048 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.32■□□□□ 0.36
ALK-201ENST00000389048 ELP1O95163 1332 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 IRS4O14654 1257 aaPredicted RBP17.32■□□□□ 0.36
ALK-201ENST00000389048 KLHDC4Q8TBB5 520 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 ABCC5O15440 1437 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 CYP26C1Q6V0L0 522 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 ANKRD44Q8N8A2 993 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 RDH13Q8NBN7 331 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 KIFAP3Q92845 792 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 VCX3BQ9H321 246 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 PRDM1O75626 825 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 CCDC24Q8N4L8 307 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 RILPQ96NA2 401 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 TBC1D31Q96DN5 1066 aa17.32■□□□□ 0.36
ALK-201ENST00000389048 OAS2P29728 719 aaKnown RBP17.31■□□□□ 0.36
ALK-201ENST00000389048 IL15P40933 162 aaPredicted RBP17.31■□□□□ 0.36
ALK-201ENST00000389048 ARFGAP2Q8N6H7 521 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 IFT74Q96LB3 600 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 GADD45BO75293 160 aaPredicted RBP17.31■□□□□ 0.36
ALK-201ENST00000389048 LDHBP07195 334 aaKnown RBP17.31■□□□□ 0.36
ALK-201ENST00000389048 RLBP1P12271 317 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 TRPC3Q13507 836 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 NOS1P29475 1434 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 ATP5DP30049 168 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 SESN3P58005 492 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 MTX1Q13505 466 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 CUL4BQ13620 913 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 ANO3Q9BYT9 981 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 HECW1Q76N89 1606 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 FANCCQ00597 558 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 CCDC62Q6P9F0 684 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 CCDC117Q8IWD4 279 aaPredicted RBP17.31■□□□□ 0.36
ALK-201ENST00000389048 CSGALNACT2Q8N6G5 542 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
ALK-201ENST00000389048 ARHGAP44Q17R89 818 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 CEP85Q6P2H3 762 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 ADAT2Q7Z6V5 191 aaKnown RBP17.31■□□□□ 0.36
ALK-201ENST00000389048 SLF1Q9BQI6 1058 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 CTTNBP2NLQ9P2B4 639 aa17.31■□□□□ 0.36
ALK-201ENST00000389048 DHX32Q7L7V1 743 aaKnown RBP17.3■□□□□ 0.36
ALK-201ENST00000389048 SECISBP2LQ93073 1101 aaKnown RBP17.3■□□□□ 0.36
ALK-201ENST00000389048 PHKBQ93100 1093 aa17.3■□□□□ 0.36
ALK-201ENST00000389048 C8orf37Q96NL8 207 aa17.3■□□□□ 0.36
ALK-201ENST00000389048 OTUD7AQ8TE49 926 aaPredicted RBP17.3■□□□□ 0.36
ALK-201ENST00000389048 VPS37BQ9H9H4 285 aa17.3■□□□□ 0.36
ALK-201ENST00000389048 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
ALK-201ENST00000389048 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
ALK-201ENST00000389048 PPP1R12AO14974 1030 aaPredicted RBP17.3■□□□□ 0.36
ALK-201ENST00000389048 UHMK1Q8TAS1 419 aaKnown RBP17.3■□□□□ 0.36
ALK-201ENST00000389048 PPME1Q9Y570 386 aa17.3■□□□□ 0.36
ALK-201ENST00000389048 KRT15P19012 456 aa17.3■□□□□ 0.36
ALK-201ENST00000389048 BAIAP2L1Q9UHR4 511 aa17.3■□□□□ 0.36
ALK-201ENST00000389048 CBX8Q9HC52 389 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 GOLGA6BA6NDN3 693 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 GNA11P29992 359 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 KSR2Q6VAB6 950 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 WHAMMQ8TF30 809 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 B4GALNT4Q76KP1 1039 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 CERS3Q8IU89 383 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 SWAP70Q9UH65 585 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 V9GY48 417 aaPredicted RBP17.29■□□□□ 0.36
ALK-201ENST00000389048 NXNQ6DKJ4 435 aa17.29■□□□□ 0.36
ALK-201ENST00000389048 TYW1BQ6NUM6 668 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms