RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 TRIM8Q9BZR9 551 aa1.42□□□□□ -2.18
RNU6-540P-201ENST00000384622 INO80BQ9C086 356 aaPredicted RBP1.42□□□□□ -2.18
RNU6-540P-201ENST00000384622 SLAMF8Q9P0V8 285 aa1.42□□□□□ -2.18
RNU6-540P-201ENST00000384622 ZFR2Q9UPR6 939 aaKnown RBP1.42□□□□□ -2.18
RNU6-540P-201ENST00000384622 AOC2O75106 756 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 CLCN7P51798 805 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 EPHA4P54764 986 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 HYAL2Q12891 473 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 SLFNL1Q499Z3 407 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 AKAP4Q5JQC9 854 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 TMPRSS7Q7RTY8 843 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 AMER2Q8N7J2 671 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 INTS4Q96HW7 963 aaKnown RBP1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 POP1Q99575 1024 aaKnown RBP1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 DUSP23Q9BVJ7 150 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 PBX4Q9BYU1 374 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 PDGFDQ9GZP0 370 aaPredicted RBP1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 ATP13A1Q9HD20 1204 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 ZNF358Q9NW07 568 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 AP4E1Q9UPM8 1137 aa1.41□□□□□ -2.18
RNU6-540P-201ENST00000384622 IRS4O14654 1257 aaPredicted RBP1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 FFAR3O14843 346 aa1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 CDK4P11802 303 aa1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 NKPD1Q17RQ9 610 aa1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 POTEAQ6S8J7 498 aa1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 PHTF2Q8N3S3 785 aa1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 NGLY1Q96IV0 654 aa1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 CFAP44Q96MT7 982 aa1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 C19orf44Q9H6X5 657 aa1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 UNKLQ9H9P5 680 aaKnown RBP1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 CWC22Q9HCG8 908 aaKnown RBP1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 RAD18Q9NS91 495 aa1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 BCS1LQ9Y276 419 aa1.4□□□□□ -2.19
RNU6-540P-201ENST00000384622 DNAJC25-GNG10A0A024R161 153 aa1.39□□□□□ -2.19
RNU6-540P-201ENST00000384622 RALGPS1Q5JS13 557 aa1.39□□□□□ -2.19
RNU6-540P-201ENST00000384622 COL13A1Q5TAT6 717 aaPredicted RBP1.39□□□□□ -2.19
RNU6-540P-201ENST00000384622 PALM2Q8IXS6 379 aa1.39□□□□□ -2.19
RNU6-540P-201ENST00000384622 HEXIM2Q96MH2 286 aaKnown RBP1.39□□□□□ -2.19
RNU6-540P-201ENST00000384622 KLC2Q9H0B6 622 aa1.39□□□□□ -2.19
RNU6-540P-201ENST00000384622 DNAJC25Q9H1X3 360 aa1.39□□□□□ -2.19
RNU6-540P-201ENST00000384622 GSX1Q9H4S2 264 aaPredicted RBP1.39□□□□□ -2.19
RNU6-540P-201ENST00000384622 SOX1O00570 391 aaPredicted RBP1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 PLATP00750 562 aa1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 LTKP29376 864 aa1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 SCNN1AP37088 669 aa1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 KRTAP27-1Q3LI81 207 aa1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 Q96M66 194 aa1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 SPATA25Q9BR10 227 aa1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 RSPH6AQ9H0K4 717 aa1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 ADARB2Q9NS39 739 aaKnown RBP1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 GTF2IRD1Q9UHL9 959 aa1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 TMEM59LQ9UK28 342 aa1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 USP20Q9Y2K6 914 aa1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 YBX2Q9Y2T7 364 aaKnown RBP1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 RTCBQ9Y3I0 505 aaKnown RBP1.38□□□□□ -2.19
RNU6-540P-201ENST00000384622 GNAT3A8MTJ3 354 aa1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 MAPK7Q13164 816 aa1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 IKBKEQ14164 716 aa1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 TBC1D10BQ4KMP7 808 aaPredicted RBP1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 MPRIPQ6WCQ1 1025 aa1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 PARP9Q8IXQ6 854 aa1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 LILRA2Q8N149 483 aa1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 CMTR1Q8N1G2 835 aaKnown RBP1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 PPP1R13LQ8WUF5 828 aa1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 LNPKQ9C0E8 428 aa1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 TSPAN10Q9H1Z9 355 aaPredicted RBP1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 PCDHGA11Q9Y5H2 935 aa1.37□□□□□ -2.19
RNU6-540P-201ENST00000384622 OR14I1A6ND48 311 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 MASP2O00187 686 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 IGF2BP3O00425 579 aaKnown RBP eCLIP1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 ZNF202O95125 648 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 MCM7P33993 719 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 PSME1Q06323 249 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 MAP7D1Q3KQU3 841 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 TOP6BLQ8N6T0 577 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 OR13H1Q8NG92 308 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 MZB1Q8WU39 189 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 HSPA12BQ96MM6 686 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 CNTD2Q9H8S5 307 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 CHIC2Q9UKJ5 165 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 CNTNAP2Q9UHC6 1331 aa1.36□□□□□ -2.19
RNU6-540P-201ENST00000384622 PPP1R12BO60237 982 aaPredicted RBP1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 NOBOXO60393 691 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 MICAL2O94851 1124 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 KRTAP10-5P60370 271 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 GSTM4Q03013 218 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 RING1Q06587 406 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 HP1BP3Q5SSJ5 553 aaPredicted RBP1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 IGFL4Q6B9Z1 124 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 ZNF585AQ6P3V2 769 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 LARP1Q6PKG0 1096 aaKnown RBP1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 GLB1LQ6UWU2 654 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 NLRP13Q86W25 1043 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 NCAPG2Q86XI2 1143 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 ADGRG2Q8IZP9 1017 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 NLGN1Q8N2Q7 840 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 NEU4Q8WWR8 484 aaPredicted RBP1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 AGAP2Q99490 1192 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 ADAMTS10Q9H324 1103 aa1.35□□□□□ -2.19
RNU6-540P-201ENST00000384622 PIDD1Q9HB75 910 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms