RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 SLF2Q8IX21 1173 aa23.88■■□□□ 1.41
CPNE9-202ENST00000383831 LLPHQ9BRT6 129 aaKnown RBP23.88■■□□□ 1.41
CPNE9-202ENST00000383831 MXD3Q9BW11 206 aa23.88■■□□□ 1.41
CPNE9-202ENST00000383831 ARPP21Q9UBL0 812 aaPredicted RBP23.88■■□□□ 1.41
CPNE9-202ENST00000383831 MKRN1Q9UHC7 482 aaKnown RBP23.88■■□□□ 1.41
CPNE9-202ENST00000383831 SUGT1Q9Y2Z0 365 aa23.88■■□□□ 1.41
CPNE9-202ENST00000383831 CTDNEP1O95476 244 aa23.88■■□□□ 1.41
CPNE9-202ENST00000383831 ZSCAN22P10073 491 aaPredicted RBP23.88■■□□□ 1.41
CPNE9-202ENST00000383831 USP5P45974 858 aa23.88■■□□□ 1.41
CPNE9-202ENST00000383831 SBK1Q52WX2 424 aa23.88■■□□□ 1.41
CPNE9-202ENST00000383831 NSUN7Q8NE18 718 aaKnown RBP23.88■■□□□ 1.41
CPNE9-202ENST00000383831 SMARCC2Q8TAQ2 1214 aa23.88■■□□□ 1.41
CPNE9-202ENST00000383831 SENP2Q9HC62 589 aa23.88■■□□□ 1.41
CPNE9-202ENST00000383831 HPS5Q9UPZ3 1129 aa23.88■■□□□ 1.41
CPNE9-202ENST00000383831 ATF5Q9Y2D1 282 aaPredicted RBP23.88■■□□□ 1.41
CPNE9-202ENST00000383831 GOLGA8BA8MQT2 603 aa23.87■■□□□ 1.41
CPNE9-202ENST00000383831 CYP2D6P10635 497 aa23.87■■□□□ 1.41
CPNE9-202ENST00000383831 TMEM67Q5HYA8 995 aa23.87■■□□□ 1.41
CPNE9-202ENST00000383831 CHAMP1Q96JM3 812 aa23.87■■□□□ 1.41
CPNE9-202ENST00000383831 LY9Q9HBG7 655 aa23.87■■□□□ 1.41
CPNE9-202ENST00000383831 MTMR6Q9Y217 621 aa23.87■■□□□ 1.41
CPNE9-202ENST00000383831 NAV1Q8NEY1 1877 aa23.87■■□□□ 1.41
CPNE9-202ENST00000383831 CDK5RAP2Q96SN8 1893 aa23.87■■□□□ 1.41
CPNE9-202ENST00000383831 LARP1BQ659C4 914 aaKnown RBP23.86■■□□□ 1.41
CPNE9-202ENST00000383831 CERS3Q8IU89 383 aa23.86■■□□□ 1.41
CPNE9-202ENST00000383831 MTFR1LQ9H019 292 aa23.86■■□□□ 1.41
CPNE9-202ENST00000383831 KCNQ5Q9NR82 932 aa23.86■■□□□ 1.41
CPNE9-202ENST00000383831 MCM9Q9NXL9 1143 aa23.86■■□□□ 1.41
CPNE9-202ENST00000383831 IFIT3O14879 490 aaKnown RBP23.86■■□□□ 1.41
CPNE9-202ENST00000383831 ECE2O60344 883 aa23.86■■□□□ 1.41
CPNE9-202ENST00000383831 FGRP09769 529 aa23.86■■□□□ 1.41
CPNE9-202ENST00000383831 AOC3Q16853 763 aa23.86■■□□□ 1.41
CPNE9-202ENST00000383831 MCTP1Q6DN14 999 aa23.86■■□□□ 1.41
CPNE9-202ENST00000383831 F8W031 263 aaPredicted RBP23.85■■□□□ 1.41
CPNE9-202ENST00000383831 USP17L8P0C7I0 530 aa23.85■■□□□ 1.41
CPNE9-202ENST00000383831 PDCP20941 246 aa23.85■■□□□ 1.41
CPNE9-202ENST00000383831 KIAA2012Q0VF49 1180 aa23.85■■□□□ 1.41
CPNE9-202ENST00000383831 RAB11FIP4Q86YS3 637 aa23.85■■□□□ 1.41
CPNE9-202ENST00000383831 SUPT20HQ8NEM7 779 aa23.85■■□□□ 1.41
CPNE9-202ENST00000383831 TGFBRAP1Q8WUH2 860 aa23.85■■□□□ 1.41
CPNE9-202ENST00000383831 ESR2Q92731 530 aa23.85■■□□□ 1.41
CPNE9-202ENST00000383831 DDX11Q96FC9 970 aa23.85■■□□□ 1.41
CPNE9-202ENST00000383831 DAGLAQ9Y4D2 1042 aa23.85■■□□□ 1.41
CPNE9-202ENST00000383831 ZNF646O15015 1829 aaPredicted RBP23.85■■□□□ 1.41
CPNE9-202ENST00000383831 SCN9AQ15858 1988 aa23.84■■□□□ 1.41
CPNE9-202ENST00000383831 PTPDC1A2A3K4 754 aa23.84■■□□□ 1.41
CPNE9-202ENST00000383831 PCP11498 1178 aaKnown RBP23.84■■□□□ 1.41
CPNE9-202ENST00000383831 LIFRP42702 1097 aa23.84■■□□□ 1.41
CPNE9-202ENST00000383831 RHBDL3P58872 404 aa23.84■■□□□ 1.41
CPNE9-202ENST00000383831 R3HDM1Q15032 1099 aaKnown RBP23.84■■□□□ 1.41
CPNE9-202ENST00000383831 SGMS1Q86VZ5 419 aa23.84■■□□□ 1.41
CPNE9-202ENST00000383831 CHMP4CQ96CF2 233 aa23.84■■□□□ 1.41
CPNE9-202ENST00000383831 ZKSCAN3Q9BRR0 538 aa23.84■■□□□ 1.41
CPNE9-202ENST00000383831 TTF2Q9UNY4 1162 aaKnown RBP23.84■■□□□ 1.41
CPNE9-202ENST00000383831 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.84■■□□□ 1.41
CPNE9-202ENST00000383831 GOLGA6L22H0YM25 854 aa23.83■■□□□ 1.41
CPNE9-202ENST00000383831 F13A1P00488 732 aa23.83■■□□□ 1.41
CPNE9-202ENST00000383831 PLCG2P16885 1265 aa23.83■■□□□ 1.41
CPNE9-202ENST00000383831 POLD1P28340 1107 aa23.83■■□□□ 1.41
CPNE9-202ENST00000383831 CCDC93Q567U6 631 aa23.83■■□□□ 1.41
CPNE9-202ENST00000383831 MTA3Q9BTC8 594 aa23.83■■□□□ 1.41
CPNE9-202ENST00000383831 VPS37CA5D8V6 355 aaPredicted RBP23.83■■□□□ 1.4
CPNE9-202ENST00000383831 PRDM1O75626 825 aa23.83■■□□□ 1.4
CPNE9-202ENST00000383831 APOA5Q6Q788 366 aa23.83■■□□□ 1.4
CPNE9-202ENST00000383831 NFXL1Q6ZNB6 911 aa23.83■■□□□ 1.4
CPNE9-202ENST00000383831 MAPKAPK5Q8IW41 473 aa23.83■■□□□ 1.4
CPNE9-202ENST00000383831 TEX11Q8IYF3 940 aa23.83■■□□□ 1.4
CPNE9-202ENST00000383831 PDIA4P13667 645 aaKnown RBP23.82■■□□□ 1.4
CPNE9-202ENST00000383831 SART3Q15020 963 aaKnown RBP23.82■■□□□ 1.4
CPNE9-202ENST00000383831 SLC4A8Q2Y0W8 1093 aa23.82■■□□□ 1.4
CPNE9-202ENST00000383831 GRIPAP1Q4V328 841 aa23.82■■□□□ 1.4
CPNE9-202ENST00000383831 C12orf60Q5U649 245 aa23.82■■□□□ 1.4
CPNE9-202ENST00000383831 STRIP1Q5VSL9 837 aa23.82■■□□□ 1.4
CPNE9-202ENST00000383831 UPF1Q92900 1129 aaKnown RBP eCLIP23.82■■□□□ 1.4
CPNE9-202ENST00000383831 DDX60LQ5H9U9 1706 aaKnown RBP23.82■■□□□ 1.4
CPNE9-202ENST00000383831 ORC4O43929 436 aa23.81■■□□□ 1.4
CPNE9-202ENST00000383831 SLC3A2P08195 630 aaKnown RBP23.81■■□□□ 1.4
CPNE9-202ENST00000383831 PTMSP20962 102 aa23.81■■□□□ 1.4
CPNE9-202ENST00000383831 HMGN5P82970 282 aaKnown RBP23.81■■□□□ 1.4
CPNE9-202ENST00000383831 RTKN2Q8IZC4 609 aa23.81■■□□□ 1.4
CPNE9-202ENST00000383831 ADAMTSL1Q8N6G6 1762 aa23.81■■□□□ 1.4
CPNE9-202ENST00000383831 PPIP5K2O43314 1243 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 TRAK2O60296 914 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 TGFB2P61812 414 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 WTAPQ15007 396 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 DACT2Q5SW24 774 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 CDC37L1Q7L3B6 337 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 FAM184AQ8NB25 1140 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 UBAC1Q9BSL1 405 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 ROBO3Q96MS0 1386 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 ERICH2A1L162 156 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 DHX16O60231 1041 aaKnown RBP23.8■■□□□ 1.4
CPNE9-202ENST00000383831 RANBP6O60518 1105 aaKnown RBP23.8■■□□□ 1.4
CPNE9-202ENST00000383831 METAP2P50579 478 aaKnown RBP eCLIP23.8■■□□□ 1.4
CPNE9-202ENST00000383831 SCNN1DP51172 638 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 FKBP1AP62942 108 aaKnown RBP23.8■■□□□ 1.4
CPNE9-202ENST00000383831 FOCADQ5VW36 1801 aa23.8■■□□□ 1.4
CPNE9-202ENST00000383831 TNKSO95271 1327 aa23.79■■□□□ 1.4
CPNE9-202ENST00000383831 FLT1P17948 1338 aa23.79■■□□□ 1.4
CPNE9-202ENST00000383831 CCDC69A6NI79 296 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms