RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 TPD52L1Q16890 204 aaPredicted RBP16.08■□□□□ 0.16
NEK4-202ENST00000383721 DPCR1Q3MIW9 517 aa16.08■□□□□ 0.16
NEK4-202ENST00000383721 AXDND1Q5T1B0 1012 aaPredicted RBP16.08■□□□□ 0.16
NEK4-202ENST00000383721 SUSD4Q5VX71 490 aa16.08■□□□□ 0.16
NEK4-202ENST00000383721 FILIP1Q7Z7B0 1213 aa16.08■□□□□ 0.16
NEK4-202ENST00000383721 PIH1D3Q9NQM4 214 aaKnown RBP16.08■□□□□ 0.16
NEK4-202ENST00000383721 ANO1Q5XXA6 986 aa16.07■□□□□ 0.16
NEK4-202ENST00000383721 CYB5R4Q7L1T6 521 aa16.07■□□□□ 0.16
NEK4-202ENST00000383721 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
NEK4-202ENST00000383721 CCDC69A6NI79 296 aa16.07■□□□□ 0.16
NEK4-202ENST00000383721 CTSWP56202 376 aa16.07■□□□□ 0.16
NEK4-202ENST00000383721 SYNE3Q6ZMZ3 975 aa16.07■□□□□ 0.16
NEK4-202ENST00000383721 CCDC24Q8N4L8 307 aa16.07■□□□□ 0.16
NEK4-202ENST00000383721 AIFM3Q96NN9 605 aa16.07■□□□□ 0.16
NEK4-202ENST00000383721 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
NEK4-202ENST00000383721 ANGEL1Q9UNK9 670 aaKnown RBP16.07■□□□□ 0.16
NEK4-202ENST00000383721 ANKRD36CQ5JPF3 1778 aa16.07■□□□□ 0.16
NEK4-202ENST00000383721 USP27XA6NNY8 438 aa16.06■□□□□ 0.16
NEK4-202ENST00000383721 SKILP12757 684 aa16.06■□□□□ 0.16
NEK4-202ENST00000383721 CCZ1BP86790 482 aa16.06■□□□□ 0.16
NEK4-202ENST00000383721 CCZ1P86791 482 aaPredicted RBP16.06■□□□□ 0.16
NEK4-202ENST00000383721 DDR1Q08345 913 aa16.06■□□□□ 0.16
NEK4-202ENST00000383721 DDX60Q8IY21 1712 aaKnown RBP16.06■□□□□ 0.16
NEK4-202ENST00000383721 ANKRD18BA2A2Z9 1011 aa16.06■□□□□ 0.16
NEK4-202ENST00000383721 ZNF202O95125 648 aa16.06■□□□□ 0.16
NEK4-202ENST00000383721 TRDNQ13061 729 aa16.06■□□□□ 0.16
NEK4-202ENST00000383721 NBPF11Q86T75 865 aa16.06■□□□□ 0.16
NEK4-202ENST00000383721 SETDB2Q96T68 719 aa16.06■□□□□ 0.16
NEK4-202ENST00000383721 ZMYM6O95789 1325 aa16.06■□□□□ 0.16
NEK4-202ENST00000383721 SH2B2O14492 632 aaPredicted RBP16.05■□□□□ 0.16
NEK4-202ENST00000383721 WDHD1O75717 1129 aaPredicted RBP16.05■□□□□ 0.16
NEK4-202ENST00000383721 IDH1O75874 414 aaKnown RBP16.05■□□□□ 0.16
NEK4-202ENST00000383721 TM4SF1P30408 202 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 UBE3CQ15386 1083 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 PPP4R3BQ5MIZ7 849 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 BPIFA3Q9BQP9 254 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 SENP2Q9HC62 589 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 GOLGB1Q14789 3259 aaKnown RBP16.05■□□□□ 0.16
NEK4-202ENST00000383721 PFKFB1P16118 471 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 RXRAP19793 462 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 CMA1P23946 247 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 TTF1Q15361 905 aaPredicted RBP16.05■□□□□ 0.16
NEK4-202ENST00000383721 PDCL2Q8N4E4 241 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 PAXBP1Q9Y5B6 917 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 ZNF532Q9HCE3 1301 aa16.05■□□□□ 0.16
NEK4-202ENST00000383721 IRS4O14654 1257 aaPredicted RBP16.04■□□□□ 0.16
NEK4-202ENST00000383721 PDE8BO95263 885 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 SLC3A2P08195 630 aaKnown RBP16.04■□□□□ 0.16
NEK4-202ENST00000383721 MMP10P09238 476 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 PHKA1P46020 1223 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 METAP2P50579 478 aaKnown RBP eCLIP16.04■□□□□ 0.16
NEK4-202ENST00000383721 NCBP1Q09161 790 aaKnown RBP16.04■□□□□ 0.16
NEK4-202ENST00000383721 NLGN1Q8N2Q7 840 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 ALG1Q9BT22 464 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
NEK4-202ENST00000383721 MROH7-TTC4A0A0A0MT08 1334 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 CASZ1Q86V15 1759 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 BIN1O00499 593 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 APPP05067 770 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 PDE6AP16499 860 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 CDC27P30260 824 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 SLC39A14Q15043 492 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 CEP135Q66GS9 1140 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 CCDC102BQ68D86 513 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 APOA5Q6Q788 366 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 RGS22Q8NE09 1264 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
NEK4-202ENST00000383721 WWC3Q9ULE0 1092 aa16.04■□□□□ 0.16
NEK4-202ENST00000383721 TCRBV5S4A2TA0A5A2 114 aa16.03■□□□□ 0.16
NEK4-202ENST00000383721 B4E1Z4 1266 aa16.03■□□□□ 0.16
NEK4-202ENST00000383721 NTSR2O95665 410 aa16.03■□□□□ 0.16
NEK4-202ENST00000383721 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
NEK4-202ENST00000383721 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
NEK4-202ENST00000383721 NYAP1Q6ZVC0 841 aa16.03■□□□□ 0.16
NEK4-202ENST00000383721 OSBPL5Q9H0X9 879 aaPredicted RBP16.03■□□□□ 0.16
NEK4-202ENST00000383721 AKAP11Q9UKA4 1901 aa16.03■□□□□ 0.16
NEK4-202ENST00000383721 POLRMTO00411 1230 aaKnown RBP16.03■□□□□ 0.16
NEK4-202ENST00000383721 RGL2O15211 777 aa16.03■□□□□ 0.16
NEK4-202ENST00000383721 NLRP12P59046 1061 aa16.03■□□□□ 0.16
NEK4-202ENST00000383721 KRT40Q6A162 431 aa16.03■□□□□ 0.16
NEK4-202ENST00000383721 VPS37DQ86XT2 251 aa16.03■□□□□ 0.16
NEK4-202ENST00000383721 PHKBQ93100 1093 aa16.03■□□□□ 0.16
NEK4-202ENST00000383721 ARID4AP29374 1257 aaPredicted RBP16.02■□□□□ 0.16
NEK4-202ENST00000383721 NCAPHQ15003 741 aa16.02■□□□□ 0.16
NEK4-202ENST00000383721 NBPF5PQ86XG9 351 aaPredicted RBP16.02■□□□□ 0.16
NEK4-202ENST00000383721 CCDC112Q8NEF3 446 aa16.02■□□□□ 0.16
NEK4-202ENST00000383721 ERFEQ4G0M1 354 aa16.02■□□□□ 0.15
NEK4-202ENST00000383721 PARP10Q53GL7 1025 aa16.02■□□□□ 0.15
NEK4-202ENST00000383721 MICU3Q86XE3 530 aa16.02■□□□□ 0.15
NEK4-202ENST00000383721 IGDCC4Q8TDY8 1250 aa16.02■□□□□ 0.15
NEK4-202ENST00000383721 STRBPQ96SI9 672 aaKnown RBP16.02■□□□□ 0.15
NEK4-202ENST00000383721 UTP14AQ9BVJ6 771 aaKnown RBP16.02■□□□□ 0.15
NEK4-202ENST00000383721 XPO4Q9C0E2 1151 aaKnown RBP16.02■□□□□ 0.15
NEK4-202ENST00000383721 INCENPQ9NQS7 918 aa16.02■□□□□ 0.15
NEK4-202ENST00000383721 CDKL5O76039 1030 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 SERPINB2P05120 415 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 GSDMDP57764 484 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 PTPAQ15257 358 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 SYCP1Q15431 976 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 NTRK3Q16288 839 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms