RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 STAP2Q9UGK3 403 aa23.45■■□□□ 1.34
GTF3A-201ENST00000381140 RPAP1Q9BWH6 1393 aaPredicted RBP23.45■■□□□ 1.34
GTF3A-201ENST00000381140 MAGEB6P1A0A0J9YX57 407 aa23.44■■□□□ 1.34
GTF3A-201ENST00000381140 CHGBP05060 677 aa23.44■■□□□ 1.34
GTF3A-201ENST00000381140 ADD2P35612 726 aa23.44■■□□□ 1.34
GTF3A-201ENST00000381140 ZNF157P51786 506 aaPredicted RBP23.44■■□□□ 1.34
GTF3A-201ENST00000381140 RGMBQ6NW40 437 aa23.44■■□□□ 1.34
GTF3A-201ENST00000381140 MAPKAPK5Q8IW41 473 aa23.44■■□□□ 1.34
GTF3A-201ENST00000381140 TGFBRAP1Q8WUH2 860 aa23.44■■□□□ 1.34
GTF3A-201ENST00000381140 TCRBV5S4A2TA0A5A2 114 aa23.43■■□□□ 1.34
GTF3A-201ENST00000381140 ECE1P42892 770 aa23.43■■□□□ 1.34
GTF3A-201ENST00000381140 ZSCAN25Q6NSZ9 544 aa23.43■■□□□ 1.34
GTF3A-201ENST00000381140 TMED8Q6PL24 325 aaPredicted RBP23.43■■□□□ 1.34
GTF3A-201ENST00000381140 MIGA2Q7L4E1 593 aa23.43■■□□□ 1.34
GTF3A-201ENST00000381140 KBTBD3Q8NAB2 608 aa23.43■■□□□ 1.34
GTF3A-201ENST00000381140 WDR33Q9C0J8 1336 aaKnown RBP23.43■■□□□ 1.34
GTF3A-201ENST00000381140 NAV1Q8NEY1 1877 aa23.43■■□□□ 1.34
GTF3A-201ENST00000381140 USP2O75604 605 aaPredicted RBP23.42■■□□□ 1.34
GTF3A-201ENST00000381140 IREB2P48200 963 aaKnown RBP23.42■■□□□ 1.34
GTF3A-201ENST00000381140 HOOK2Q96ED9 719 aa23.42■■□□□ 1.34
GTF3A-201ENST00000381140 HHIPL1Q96JK4 782 aa23.42■■□□□ 1.34
GTF3A-201ENST00000381140 CSRNP1Q96S65 589 aa23.42■■□□□ 1.34
GTF3A-201ENST00000381140 FSD1Q9BTV5 496 aa23.42■■□□□ 1.34
GTF3A-201ENST00000381140 USP5P45974 858 aa23.41■■□□□ 1.34
GTF3A-201ENST00000381140 DCAF15Q66K64 600 aa23.41■■□□□ 1.34
GTF3A-201ENST00000381140 PLEKHM2Q8IWE5 1019 aa23.41■■□□□ 1.34
GTF3A-201ENST00000381140 DDTLA6NHG4 134 aaPredicted RBP23.4■■□□□ 1.34
GTF3A-201ENST00000381140 SH3BP5LQ7L8J4 393 aa23.4■■□□□ 1.34
GTF3A-201ENST00000381140 RIOK1Q9BRS2 568 aaKnown RBP23.4■■□□□ 1.34
GTF3A-201ENST00000381140 OSBPL5Q9H0X9 879 aaPredicted RBP23.4■■□□□ 1.34
GTF3A-201ENST00000381140 ARMT1Q9H993 441 aa23.4■■□□□ 1.34
GTF3A-201ENST00000381140 SAP30BPQ9UHR5 308 aaKnown RBP23.4■■□□□ 1.34
GTF3A-201ENST00000381140 BAZ2AQ9UIF9 1905 aaKnown RBP23.4■■□□□ 1.34
GTF3A-201ENST00000381140 FLT1P17948 1338 aa23.4■■□□□ 1.34
GTF3A-201ENST00000381140 AOC2O75106 756 aa23.4■■□□□ 1.34
GTF3A-201ENST00000381140 MBD4O95243 580 aa23.4■■□□□ 1.34
GTF3A-201ENST00000381140 UBE3CQ15386 1083 aa23.4■■□□□ 1.34
GTF3A-201ENST00000381140 SLC4A8Q2Y0W8 1093 aa23.4■■□□□ 1.34
GTF3A-201ENST00000381140 CERS3Q8IU89 383 aa23.4■■□□□ 1.34
GTF3A-201ENST00000381140 LCORLQ8N3X6 602 aa23.4■■□□□ 1.34
GTF3A-201ENST00000381140 CLMNQ96JQ2 1002 aa23.4■■□□□ 1.34
GTF3A-201ENST00000381140 TRIM6-TRIM34B2RNG4 842 aa23.39■■□□□ 1.33
GTF3A-201ENST00000381140 PDE4AP27815 886 aa23.39■■□□□ 1.33
GTF3A-201ENST00000381140 MAP3K11Q16584 847 aa23.39■■□□□ 1.33
GTF3A-201ENST00000381140 LDLRAD1Q5T700 205 aa23.39■■□□□ 1.33
GTF3A-201ENST00000381140 ZNF341Q9BYN7 854 aa23.39■■□□□ 1.33
GTF3A-201ENST00000381140 CRNKL1Q9BZJ0 848 aaKnown RBP23.39■■□□□ 1.33
GTF3A-201ENST00000381140 RNF113AO15541 343 aaKnown RBP23.38■■□□□ 1.33
GTF3A-201ENST00000381140 NPM3O75607 178 aaKnown RBP23.38■■□□□ 1.33
GTF3A-201ENST00000381140 MKRN3Q13064 507 aaKnown RBP23.38■■□□□ 1.33
GTF3A-201ENST00000381140 RASAL3Q86YV0 1011 aa23.38■■□□□ 1.33
GTF3A-201ENST00000381140 CCDC102AQ96A19 550 aa23.38■■□□□ 1.33
GTF3A-201ENST00000381140 WRNIP1Q96S55 665 aa23.38■■□□□ 1.33
GTF3A-201ENST00000381140 SIPA1L1O43166 1804 aa23.37■■□□□ 1.33
GTF3A-201ENST00000381140 SLURP2P0DP57 97 aa23.37■■□□□ 1.33
GTF3A-201ENST00000381140 LRRFIP1Q32MZ4 808 aaKnown RBP23.37■■□□□ 1.33
GTF3A-201ENST00000381140 ANKRD13AQ8IZ07 590 aa23.37■■□□□ 1.33
GTF3A-201ENST00000381140 RILPL2Q969X0 211 aa23.37■■□□□ 1.33
GTF3A-201ENST00000381140 AIDAQ96BJ3 306 aa23.37■■□□□ 1.33
GTF3A-201ENST00000381140 EVI5LQ96CN4 794 aa23.37■■□□□ 1.33
GTF3A-201ENST00000381140 SLC10A4Q96EP9 437 aa23.37■■□□□ 1.33
GTF3A-201ENST00000381140 FAM196BA6NMK8 535 aa23.36■■□□□ 1.33
GTF3A-201ENST00000381140 FAM155AB1AL88 458 aaPredicted RBP23.36■■□□□ 1.33
GTF3A-201ENST00000381140 ZFYP08048 801 aaPredicted RBP23.36■■□□□ 1.33
GTF3A-201ENST00000381140 SLC10A3P09131 477 aa23.36■■□□□ 1.33
GTF3A-201ENST00000381140 MAP3K9P80192 1104 aa23.36■■□□□ 1.33
GTF3A-201ENST00000381140 PUS7LQ9H0K6 701 aaKnown RBP23.36■■□□□ 1.33
GTF3A-201ENST00000381140 ELP3Q9H9T3 547 aa23.36■■□□□ 1.33
GTF3A-201ENST00000381140 PALD1Q9ULE6 856 aa23.36■■□□□ 1.33
GTF3A-201ENST00000381140 CSADQ9Y600 493 aa23.36■■□□□ 1.33
GTF3A-201ENST00000381140 ATRNL1Q5VV63 1379 aa23.35■■□□□ 1.33
GTF3A-201ENST00000381140 COL2A1P02458 1487 aaPredicted RBP23.35■■□□□ 1.33
GTF3A-201ENST00000381140 CENPQQ7L2Z9 268 aaPredicted RBP23.35■■□□□ 1.33
GTF3A-201ENST00000381140 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.35■■□□□ 1.33
GTF3A-201ENST00000381140 SDR42E1Q8WUS8 393 aa23.35■■□□□ 1.33
GTF3A-201ENST00000381140 APPBP2Q92624 585 aa23.35■■□□□ 1.33
GTF3A-201ENST00000381140 THSD7BQ9C0I4 1608 aa23.35■■□□□ 1.33
GTF3A-201ENST00000381140 ATAD5Q96QE3 1844 aa23.34■■□□□ 1.33
GTF3A-201ENST00000381140 PRKAB2O43741 272 aa23.34■■□□□ 1.33
GTF3A-201ENST00000381140 NOGQ13253 232 aa23.34■■□□□ 1.33
GTF3A-201ENST00000381140 VGLL4Q14135 290 aa23.34■■□□□ 1.33
GTF3A-201ENST00000381140 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.34■■□□□ 1.33
GTF3A-201ENST00000381140 ZKSCAN4Q969J2 545 aaPredicted RBP23.34■■□□□ 1.33
GTF3A-201ENST00000381140 ZIC5Q96T25 663 aa23.34■■□□□ 1.33
GTF3A-201ENST00000381140 OSBPL3Q9H4L5 887 aa23.34■■□□□ 1.33
GTF3A-201ENST00000381140 DDX60LQ5H9U9 1706 aaKnown RBP23.34■■□□□ 1.33
GTF3A-201ENST00000381140 INPP5BP32019 993 aa23.33■■□□□ 1.33
GTF3A-201ENST00000381140 JMYQ8N9B5 988 aa23.33■■□□□ 1.33
GTF3A-201ENST00000381140 OSBP2Q969R2 916 aa23.33■■□□□ 1.33
GTF3A-201ENST00000381140 DHX36Q9H2U1 1008 aaKnown RBP23.33■■□□□ 1.33
GTF3A-201ENST00000381140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.33■■□□□ 1.33
GTF3A-201ENST00000381140 DOCK1Q14185 1865 aa23.32■■□□□ 1.32
GTF3A-201ENST00000381140 M0R2C6 588 aa23.32■■□□□ 1.32
GTF3A-201ENST00000381140 TRIM34Q9BYJ4 488 aa23.32■■□□□ 1.32
GTF3A-201ENST00000381140 PI4KBQ9UBF8 816 aa23.32■■□□□ 1.32
GTF3A-201ENST00000381140 MYH8P13535 1937 aa23.32■■□□□ 1.32
GTF3A-201ENST00000381140 HLA-DOAP06340 250 aa23.31■■□□□ 1.32
GTF3A-201ENST00000381140 KIF23Q02241 960 aaPredicted RBP23.31■■□□□ 1.32
GTF3A-201ENST00000381140 CRACR2BQ8N4Y2 399 aaPredicted RBP23.31■■□□□ 1.32
GTF3A-201ENST00000381140 WNK4Q96J92 1243 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms