RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 CLIC4Q9Y696 253 aa20.03■□□□□ 0.8
PDX1-201ENST00000381033 RANBP6O60518 1105 aaKnown RBP20.03■□□□□ 0.8
PDX1-201ENST00000381033 LETM1O95202 739 aaPredicted RBP20.03■□□□□ 0.8
PDX1-201ENST00000381033 PRDX5P30044 214 aa20.03■□□□□ 0.8
PDX1-201ENST00000381033 MMP14P50281 582 aa20.03■□□□□ 0.8
PDX1-201ENST00000381033 NFIXQ14938 502 aa20.03■□□□□ 0.8
PDX1-201ENST00000381033 RIOK1Q9BRS2 568 aaKnown RBP20.03■□□□□ 0.8
PDX1-201ENST00000381033 RCOR1Q9UKL0 485 aa20.03■□□□□ 0.8
PDX1-201ENST00000381033 KIF3AQ9Y496 699 aa20.03■□□□□ 0.8
PDX1-201ENST00000381033 ZNF831Q5JPB2 1677 aa20.03■□□□□ 0.8
PDX1-201ENST00000381033 SLC4A8Q2Y0W8 1093 aa20.02■□□□□ 0.8
PDX1-201ENST00000381033 TRAPPC3LQ5T215 181 aa20.02■□□□□ 0.8
PDX1-201ENST00000381033 NYXQ9GZU5 481 aa20.02■□□□□ 0.8
PDX1-201ENST00000381033 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.8
PDX1-201ENST00000381033 MAGEB6P1A0A0J9YX57 407 aa20.02■□□□□ 0.79
PDX1-201ENST00000381033 PRDM1O75626 825 aa20.02■□□□□ 0.79
PDX1-201ENST00000381033 TPM2P07951 284 aa20.02■□□□□ 0.79
PDX1-201ENST00000381033 MAP3K11Q16584 847 aa20.02■□□□□ 0.79
PDX1-201ENST00000381033 GNL3LQ9NVN8 582 aaKnown RBP20.02■□□□□ 0.79
PDX1-201ENST00000381033 ZMYM6O95789 1325 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 C4AP0C0L4 1744 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 C4BP0C0L5 1744 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 ZBTB43O43298 467 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 DHX16O60231 1041 aaKnown RBP20.01■□□□□ 0.79
PDX1-201ENST00000381033 NTRK3Q16288 839 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 FBXO33Q7Z6M2 555 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 BAZ2AQ9UIF9 1905 aaKnown RBP20.01■□□□□ 0.79
PDX1-201ENST00000381033 MYH15Q9Y2K3 1946 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 WDR19Q8NEZ3 1342 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 CHD4Q14839 1912 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 PTMAP06454 111 aaKnown RBP20.01■□□□□ 0.79
PDX1-201ENST00000381033 ME1P48163 572 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 PPARAQ07869 468 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 CCAR1Q8IX12 1150 aaKnown RBP20.01■□□□□ 0.79
PDX1-201ENST00000381033 MRVI1Q9Y6F6 885 aa20.01■□□□□ 0.79
PDX1-201ENST00000381033 CACNA1SQ13698 1873 aa20■□□□□ 0.79
PDX1-201ENST00000381033 NHSQ6T4R5 1651 aa20■□□□□ 0.79
PDX1-201ENST00000381033 GUCY1A2P33402 732 aa20■□□□□ 0.79
PDX1-201ENST00000381033 ZNF592Q92610 1267 aa20■□□□□ 0.79
PDX1-201ENST00000381033 NACAP1Q9BZK3 213 aa20■□□□□ 0.79
PDX1-201ENST00000381033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20■□□□□ 0.79
PDX1-201ENST00000381033 GOLGA8AA7E2F4 631 aa20■□□□□ 0.79
PDX1-201ENST00000381033 TYRO3Q06418 890 aa20■□□□□ 0.79
PDX1-201ENST00000381033 FAM43BQ6ZT52 329 aaPredicted RBP20■□□□□ 0.79
PDX1-201ENST00000381033 TMEM87BQ96K49 555 aa20■□□□□ 0.79
PDX1-201ENST00000381033 ALG1Q9BT22 464 aa20■□□□□ 0.79
PDX1-201ENST00000381033 TAF1LQ8IZX4 1826 aa20■□□□□ 0.79
PDX1-201ENST00000381033 ADCY5O95622 1261 aa19.99■□□□□ 0.79
PDX1-201ENST00000381033 MECOMQ03112 1051 aa19.99■□□□□ 0.79
PDX1-201ENST00000381033 LUZP1Q86V48 1076 aa19.99■□□□□ 0.79
PDX1-201ENST00000381033 CLSTN2Q9H4D0 955 aa19.99■□□□□ 0.79
PDX1-201ENST00000381033 AATFQ9NY61 560 aaKnown RBP eCLIP19.99■□□□□ 0.79
PDX1-201ENST00000381033 PCDHA7Q9UN72 937 aa19.99■□□□□ 0.79
PDX1-201ENST00000381033 SLC12A7Q9Y666 1083 aa19.99■□□□□ 0.79
PDX1-201ENST00000381033 TNRC6CQ9HCJ0 1690 aaKnown RBP19.99■□□□□ 0.79
PDX1-201ENST00000381033 HIBADHP31937 336 aaKnown RBP19.99■□□□□ 0.79
PDX1-201ENST00000381033 ZSCAN30Q86W11 494 aa19.99■□□□□ 0.79
PDX1-201ENST00000381033 STAG1Q8WVM7 1258 aa19.99■□□□□ 0.79
PDX1-201ENST00000381033 SBF2Q86WG5 1849 aa19.98■□□□□ 0.79
PDX1-201ENST00000381033 CCDC192P0DO97 292 aa19.98■□□□□ 0.79
PDX1-201ENST00000381033 SNW1Q13573 536 aaKnown RBP19.98■□□□□ 0.79
PDX1-201ENST00000381033 SGMS1Q86VZ5 419 aa19.98■□□□□ 0.79
PDX1-201ENST00000381033 NSUN4Q96CB9 384 aaKnown RBP19.98■□□□□ 0.79
PDX1-201ENST00000381033 GNAT2P19087 354 aa19.98■□□□□ 0.79
PDX1-201ENST00000381033 KIF23Q02241 960 aaPredicted RBP19.98■□□□□ 0.79
PDX1-201ENST00000381033 MYH13Q9UKX3 1938 aa19.97■□□□□ 0.79
PDX1-201ENST00000381033 A0A1B0GVL5 298 aa19.97■□□□□ 0.79
PDX1-201ENST00000381033 CCDC69A6NI79 296 aa19.97■□□□□ 0.79
PDX1-201ENST00000381033 ANO6Q4KMQ2 910 aa19.97■□□□□ 0.79
PDX1-201ENST00000381033 MYSM1Q5VVJ2 828 aa19.97■□□□□ 0.79
PDX1-201ENST00000381033 SLC26A6Q9BXS9 759 aa19.97■□□□□ 0.79
PDX1-201ENST00000381033 KRT40Q6A162 431 aa19.97■□□□□ 0.79
PDX1-201ENST00000381033 NUP133Q8WUM0 1156 aa19.97■□□□□ 0.79
PDX1-201ENST00000381033 ZNF396Q96N95 335 aaPredicted RBP19.97■□□□□ 0.79
PDX1-201ENST00000381033 DDX19AQ9NUU7 478 aaKnown RBP19.97■□□□□ 0.79
PDX1-201ENST00000381033 ANKIB1Q9P2G1 1089 aa19.97■□□□□ 0.79
PDX1-201ENST00000381033 GRIK5Q16478 980 aa19.96■□□□□ 0.79
PDX1-201ENST00000381033 LINC00301Q8NCQ3 95 aa19.96■□□□□ 0.79
PDX1-201ENST00000381033 KRT23Q9C075 422 aa19.96■□□□□ 0.79
PDX1-201ENST00000381033 MYH2Q9UKX2 1941 aa19.96■□□□□ 0.79
PDX1-201ENST00000381033 IARSP41252 1262 aaKnown RBP19.96■□□□□ 0.79
PDX1-201ENST00000381033 LIFRP42702 1097 aa19.96■□□□□ 0.79
PDX1-201ENST00000381033 COL24A1Q17RW2 1714 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 USP17L12C9JPN9 530 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 USP17L21D6R901 530 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 TRIM37O94972 964 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 WTAPQ15007 396 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 FSIP1Q8NA03 581 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 CNBD1Q8NA66 436 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 FBXW7Q969H0 707 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 DNAJC25Q9H1X3 360 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 CNNM2Q9H8M5 875 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 QTRT2Q9H974 415 aaKnown RBP19.95■□□□□ 0.78
PDX1-201ENST00000381033 LY75O60449 1722 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 ONECUT3O60422 494 aaPredicted RBP19.95■□□□□ 0.78
PDX1-201ENST00000381033 MARCKSP29966 332 aaPredicted RBP19.95■□□□□ 0.78
PDX1-201ENST00000381033 MAPK8IP2Q13387 824 aaPredicted RBP19.95■□□□□ 0.78
PDX1-201ENST00000381033 RTEL1Q9NZ71 1219 aa19.95■□□□□ 0.78
PDX1-201ENST00000381033 hCG_1642624A0A1W2PR95 340 aa19.94■□□□□ 0.78
PDX1-201ENST00000381033 CYP2D6P10635 497 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms