RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 FBXO18Q8NFZ0 1043 aa22.49■■□□□ 1.19
GMDS-201ENST00000380805 ORC3Q9UBD5 711 aaPredicted RBP22.49■■□□□ 1.19
GMDS-201ENST00000380805 POLRMTO00411 1230 aaKnown RBP22.48■■□□□ 1.19
GMDS-201ENST00000380805 ZBTB43O43298 467 aa22.48■■□□□ 1.19
GMDS-201ENST00000380805 TDRD7Q8NHU6 1098 aaKnown RBP22.48■■□□□ 1.19
GMDS-201ENST00000380805 SDR42E1Q8WUS8 393 aa22.48■■□□□ 1.19
GMDS-201ENST00000380805 RPGRQ92834 1020 aaKnown RBP22.48■■□□□ 1.19
GMDS-201ENST00000380805 SENP2Q9HC62 589 aa22.48■■□□□ 1.19
GMDS-201ENST00000380805 INCENPQ9NQS7 918 aa22.48■■□□□ 1.19
GMDS-201ENST00000380805 TFIP11Q9UBB9 837 aaKnown RBP22.48■■□□□ 1.19
GMDS-201ENST00000380805 RCOR1Q9UKL0 485 aa22.48■■□□□ 1.19
GMDS-201ENST00000380805 STK36Q9NRP7 1315 aa22.48■■□□□ 1.19
GMDS-201ENST00000380805 DDR1Q08345 913 aa22.48■■□□□ 1.19
GMDS-201ENST00000380805 NTRK3Q16288 839 aa22.48■■□□□ 1.19
GMDS-201ENST00000380805 SPTY2D1Q68D10 685 aaPredicted RBP22.48■■□□□ 1.19
GMDS-201ENST00000380805 IFIT3O14879 490 aaKnown RBP22.47■■□□□ 1.19
GMDS-201ENST00000380805 DYNLL1P63167 89 aaKnown RBP22.47■■□□□ 1.19
GMDS-201ENST00000380805 SART3Q15020 963 aaKnown RBP22.47■■□□□ 1.19
GMDS-201ENST00000380805 CPLX2Q6PUV4 134 aaKnown RBP22.47■■□□□ 1.19
GMDS-201ENST00000380805 TMTC2Q8N394 836 aa22.47■■□□□ 1.19
GMDS-201ENST00000380805 C8orf76Q96K31 380 aa22.47■■□□□ 1.19
GMDS-201ENST00000380805 FUCA2Q9BTY2 467 aa22.47■■□□□ 1.19
GMDS-201ENST00000380805 FAM217BQ9NTX9 383 aaPredicted RBP22.47■■□□□ 1.19
GMDS-201ENST00000380805 MYH2Q9UKX2 1941 aa22.47■■□□□ 1.19
GMDS-201ENST00000380805 WDR66Q8TBY9 1149 aa22.46■■□□□ 1.19
GMDS-201ENST00000380805 RBM17Q96I25 401 aaKnown RBP22.46■■□□□ 1.19
GMDS-201ENST00000380805 PGBD1Q96JS3 809 aa22.46■■□□□ 1.19
GMDS-201ENST00000380805 ZNF396Q96N95 335 aaPredicted RBP22.46■■□□□ 1.19
GMDS-201ENST00000380805 ANKIB1Q9P2G1 1089 aa22.46■■□□□ 1.19
GMDS-201ENST00000380805 PRDX5P30044 214 aa22.45■■□□□ 1.19
GMDS-201ENST00000380805 CDC27P30260 824 aa22.45■■□□□ 1.19
GMDS-201ENST00000380805 BRAPQ7Z569 592 aa22.45■■□□□ 1.19
GMDS-201ENST00000380805 CRAMP1Q96RY5 1269 aa22.45■■□□□ 1.19
GMDS-201ENST00000380805 PODXL2Q9NZ53 605 aa22.45■■□□□ 1.19
GMDS-201ENST00000380805 SLC12A7Q9Y666 1083 aa22.45■■□□□ 1.19
GMDS-201ENST00000380805 BBOX1O75936 387 aa22.45■■□□□ 1.18
GMDS-201ENST00000380805 MSL1Q68DK7 614 aa22.45■■□□□ 1.18
GMDS-201ENST00000380805 ZNF804AQ7Z570 1209 aa22.45■■□□□ 1.18
GMDS-201ENST00000380805 ANP32BQ92688 251 aaKnown RBP22.45■■□□□ 1.18
GMDS-201ENST00000380805 ATP8A2Q9NTI2 1148 aa22.45■■□□□ 1.18
GMDS-201ENST00000380805 GOLGA8AA7E2F4 631 aa22.44■■□□□ 1.18
GMDS-201ENST00000380805 ATP2B4P23634 1241 aa22.44■■□□□ 1.18
GMDS-201ENST00000380805 TMC4Q7Z404 712 aa22.44■■□□□ 1.18
GMDS-201ENST00000380805 MICU3Q86XE3 530 aa22.44■■□□□ 1.18
GMDS-201ENST00000380805 ESR2Q92731 530 aa22.44■■□□□ 1.18
GMDS-201ENST00000380805 PDLIM2Q96JY6 352 aa22.44■■□□□ 1.18
GMDS-201ENST00000380805 CRNKL1Q9BZJ0 848 aaKnown RBP22.44■■□□□ 1.18
GMDS-201ENST00000380805 DDX19AQ9NUU7 478 aaKnown RBP22.44■■□□□ 1.18
GMDS-201ENST00000380805 CCDC69A6NI79 296 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 LIG1P18858 919 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 GPSM2P81274 684 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 CHAF1AQ13111 956 aaPredicted RBP22.43■■□□□ 1.18
GMDS-201ENST00000380805 WTAPQ15007 396 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 SEC23AQ15436 765 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 SBK1Q52WX2 424 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 NFXL1Q6ZNB6 911 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 RBM43Q6ZSC3 357 aaKnown RBP22.43■■□□□ 1.18
GMDS-201ENST00000380805 RAB11FIP4Q86YS3 637 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 USP28Q96RU2 1077 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 ZBTB7AO95365 584 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 IFNAR1P17181 557 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 NT5C2P49902 561 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 CTR9Q6PD62 1173 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 FAM43AQ8N2R8 423 aa22.43■■□□□ 1.18
GMDS-201ENST00000380805 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.43■■□□□ 1.18
GMDS-201ENST00000380805 ERICH2A1L162 156 aa22.42■■□□□ 1.18
GMDS-201ENST00000380805 GOLGA6L4A6NEF3 574 aa22.42■■□□□ 1.18
GMDS-201ENST00000380805 GUCY1B3Q02153 619 aa22.42■■□□□ 1.18
GMDS-201ENST00000380805 DCP1AQ9NPI6 582 aaPredicted RBP22.42■■□□□ 1.18
GMDS-201ENST00000380805 RTEL1Q9NZ71 1219 aa22.42■■□□□ 1.18
GMDS-201ENST00000380805 CDK5RAP2Q96SN8 1893 aa22.42■■□□□ 1.18
GMDS-201ENST00000380805 NAV1Q8NEY1 1877 aa22.41■■□□□ 1.18
GMDS-201ENST00000380805 MINDY4BA8MYZ0 360 aa22.41■■□□□ 1.18
GMDS-201ENST00000380805 ORC4O43929 436 aa22.41■■□□□ 1.18
GMDS-201ENST00000380805 RANBP6O60518 1105 aaKnown RBP22.41■■□□□ 1.18
GMDS-201ENST00000380805 PPFIA3O75145 1194 aa22.41■■□□□ 1.18
GMDS-201ENST00000380805 IL1R1P14778 569 aa22.41■■□□□ 1.18
GMDS-201ENST00000380805 FOSBP53539 338 aa22.41■■□□□ 1.18
GMDS-201ENST00000380805 KIF23Q02241 960 aaPredicted RBP22.41■■□□□ 1.18
GMDS-201ENST00000380805 PPP2R5BQ15173 497 aa22.41■■□□□ 1.18
GMDS-201ENST00000380805 UVSSAQ2YD98 709 aa22.41■■□□□ 1.18
GMDS-201ENST00000380805 RRP12Q5JTH9 1297 aaKnown RBP22.41■■□□□ 1.18
GMDS-201ENST00000380805 SYNE3Q6ZMZ3 975 aa22.41■■□□□ 1.18
GMDS-201ENST00000380805 SLC51AQ86UW1 340 aa22.41■■□□□ 1.18
GMDS-201ENST00000380805 ARPP21Q9UBL0 812 aaPredicted RBP22.41■■□□□ 1.18
GMDS-201ENST00000380805 DDX60LQ5H9U9 1706 aaKnown RBP22.4■■□□□ 1.18
GMDS-201ENST00000380805 FMNL1O95466 1100 aaPredicted RBP22.4■■□□□ 1.18
GMDS-201ENST00000380805 SLC16A10Q8TF71 515 aa22.4■■□□□ 1.18
GMDS-201ENST00000380805 NUP62CLQ9H1M0 184 aa22.4■■□□□ 1.18
GMDS-201ENST00000380805 AATFQ9NY61 560 aaKnown RBP eCLIP22.4■■□□□ 1.18
GMDS-201ENST00000380805 RXRAP19793 462 aa22.4■■□□□ 1.18
GMDS-201ENST00000380805 IARSP41252 1262 aaKnown RBP22.4■■□□□ 1.18
GMDS-201ENST00000380805 DZIP1Q86YF9 867 aaKnown RBP22.4■■□□□ 1.18
GMDS-201ENST00000380805 NLGN1Q8N2Q7 840 aa22.4■■□□□ 1.18
GMDS-201ENST00000380805 UBAC1Q9BSL1 405 aa22.4■■□□□ 1.18
GMDS-201ENST00000380805 ALG1Q9BT22 464 aa22.4■■□□□ 1.18
GMDS-201ENST00000380805 POLR3EQ9NVU0 708 aa22.4■■□□□ 1.18
GMDS-201ENST00000380805 GGA1Q9UJY5 639 aa22.4■■□□□ 1.18
GMDS-201ENST00000380805 ATF5Q9Y2D1 282 aaPredicted RBP22.4■■□□□ 1.18
GMDS-201ENST00000380805 TNKSO95271 1327 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms