RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PPP2R5BQ15173 497 aa26.93■■□□□ 1.9
VPS16-201ENST00000380443 GRAPLQ8TC17 118 aaPredicted RBP26.93■■□□□ 1.9
VPS16-201ENST00000380443 WASF1Q92558 559 aa26.93■■□□□ 1.9
VPS16-201ENST00000380443 GOLGA8AA7E2F4 631 aa26.92■■□□□ 1.9
VPS16-201ENST00000380443 NFIXQ14938 502 aa26.92■■□□□ 1.9
VPS16-201ENST00000380443 CNBD1Q8NA66 436 aa26.92■■□□□ 1.9
VPS16-201ENST00000380443 USP28Q96RU2 1077 aa26.92■■□□□ 1.9
VPS16-201ENST00000380443 NT5C2P49902 561 aa26.91■■□□□ 1.9
VPS16-201ENST00000380443 CCDC196A0A1B0GTZ2 297 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 YEATS4O95619 227 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 TPRNQ4KMQ1 711 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 ADGRA1Q86SQ6 560 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 ESR2Q92731 530 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 POLR3EQ9NVU0 708 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 CAVIN2O95810 425 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 IARSP41252 1262 aaKnown RBP26.9■■□□□ 1.9
VPS16-201ENST00000380443 GUCY1B3Q02153 619 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 WTAPQ15007 396 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 C15orf52Q6ZUT6 534 aaKnown RBP26.9■■□□□ 1.9
VPS16-201ENST00000380443 ZSCAN30Q86W11 494 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 AMIGO3Q86WK7 504 aa26.9■■□□□ 1.9
VPS16-201ENST00000380443 NSUN4Q96CB9 384 aaKnown RBP26.9■■□□□ 1.9
VPS16-201ENST00000380443 FOSBP53539 338 aa26.89■■□□□ 1.9
VPS16-201ENST00000380443 NTRK3Q16288 839 aa26.89■■□□□ 1.9
VPS16-201ENST00000380443 KCNG4Q8TDN1 519 aa26.89■■□□□ 1.9
VPS16-201ENST00000380443 ALG1Q9BT22 464 aa26.89■■□□□ 1.9
VPS16-201ENST00000380443 CCDC39Q9UFE4 941 aa26.89■■□□□ 1.9
VPS16-201ENST00000380443 MYH13Q9UKX3 1938 aa26.89■■□□□ 1.9
VPS16-201ENST00000380443 IRS2Q9Y4H2 1338 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 FGRP09769 529 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 QSER1Q2KHR3 1735 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 A0A1W2PQ27 194 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 A0A1W2PQ64 194 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 A0A1W2PQD8 194 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 IFNAR1P17181 557 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 CCDC73Q6ZRK6 1079 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 MICU3Q86XE3 530 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 FLAD1Q8NFF5 587 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 NKX2-3Q8TAU0 364 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 TACC3Q9Y6A5 838 aa26.88■■□□□ 1.89
VPS16-201ENST00000380443 MAST2Q6P0Q8 1798 aa26.87■■□□□ 1.89
VPS16-201ENST00000380443 CDC27P30260 824 aa26.87■■□□□ 1.89
VPS16-201ENST00000380443 KIF23Q02241 960 aaPredicted RBP26.87■■□□□ 1.89
VPS16-201ENST00000380443 SSRP1Q08945 709 aaKnown RBP26.87■■□□□ 1.89
VPS16-201ENST00000380443 MYSM1Q5VVJ2 828 aa26.87■■□□□ 1.89
VPS16-201ENST00000380443 WTIPA6NIX2 430 aaPredicted RBP26.86■■□□□ 1.89
VPS16-201ENST00000380443 NR1I2O75469 434 aa26.86■■□□□ 1.89
VPS16-201ENST00000380443 TRIM29Q14134 588 aa26.86■■□□□ 1.89
VPS16-201ENST00000380443 ADALQ6DHV7 355 aa26.86■■□□□ 1.89
VPS16-201ENST00000380443 CCAR1Q8IX12 1150 aaKnown RBP26.86■■□□□ 1.89
VPS16-201ENST00000380443 WDR66Q8TBY9 1149 aa26.86■■□□□ 1.89
VPS16-201ENST00000380443 UBAC1Q9BSL1 405 aa26.86■■□□□ 1.89
VPS16-201ENST00000380443 CRNKL1Q9BZJ0 848 aaKnown RBP26.86■■□□□ 1.89
VPS16-201ENST00000380443 TOMM22Q9NS69 142 aa26.86■■□□□ 1.89
VPS16-201ENST00000380443 ATP8A2Q9NTI2 1148 aa26.86■■□□□ 1.89
VPS16-201ENST00000380443 FAM217BQ9NTX9 383 aaPredicted RBP26.86■■□□□ 1.89
VPS16-201ENST00000380443 XDHP47989 1333 aa26.86■■□□□ 1.89
VPS16-201ENST00000380443 TNRC6CQ9HCJ0 1690 aaKnown RBP26.86■■□□□ 1.89
VPS16-201ENST00000380443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.86■■□□□ 1.89
VPS16-201ENST00000380443 FMNL1O95466 1100 aaPredicted RBP26.86■■□□□ 1.89
VPS16-201ENST00000380443 MECOMQ03112 1051 aa26.86■■□□□ 1.89
VPS16-201ENST00000380443 UBR3Q6ZT12 1888 aa26.85■■□□□ 1.89
VPS16-201ENST00000380443 ST5P78524 1137 aa26.85■■□□□ 1.89
VPS16-201ENST00000380443 TYRO3Q06418 890 aa26.85■■□□□ 1.89
VPS16-201ENST00000380443 RRP12Q5JTH9 1297 aaKnown RBP26.85■■□□□ 1.89
VPS16-201ENST00000380443 RAB11FIP4Q86YS3 637 aa26.85■■□□□ 1.89
VPS16-201ENST00000380443 LINC00301Q8NCQ3 95 aa26.85■■□□□ 1.89
VPS16-201ENST00000380443 FAM200AQ8TCP9 573 aa26.85■■□□□ 1.89
VPS16-201ENST00000380443 SDR42E1Q8WUS8 393 aa26.85■■□□□ 1.89
VPS16-201ENST00000380443 INCENPQ9NQS7 918 aa26.85■■□□□ 1.89
VPS16-201ENST00000380443 MINDY4BA8MYZ0 360 aa26.84■■□□□ 1.89
VPS16-201ENST00000380443 CEBPZQ03701 1054 aaKnown RBP26.84■■□□□ 1.89
VPS16-201ENST00000380443 FAM160A1Q05DH4 1040 aa26.84■■□□□ 1.89
VPS16-201ENST00000380443 RTN1Q16799 776 aa26.84■■□□□ 1.89
VPS16-201ENST00000380443 TRIM22Q8IYM9 498 aa26.84■■□□□ 1.89
VPS16-201ENST00000380443 SENP2Q9HC62 589 aa26.84■■□□□ 1.89
VPS16-201ENST00000380443 SLC3A2P08195 630 aaKnown RBP26.83■■□□□ 1.89
VPS16-201ENST00000380443 KLRK1P26718 216 aa26.83■■□□□ 1.89
VPS16-201ENST00000380443 ME1P48163 572 aa26.83■■□□□ 1.89
VPS16-201ENST00000380443 STK38Q15208 465 aa26.83■■□□□ 1.89
VPS16-201ENST00000380443 CRY2Q49AN0 593 aa26.83■■□□□ 1.89
VPS16-201ENST00000380443 PRR5LQ6MZQ0 368 aa26.83■■□□□ 1.89
VPS16-201ENST00000380443 SASS6Q6UVJ0 657 aa26.83■■□□□ 1.89
VPS16-201ENST00000380443 ZNF384Q8TF68 577 aa26.83■■□□□ 1.89
VPS16-201ENST00000380443 NOL7Q9UMY1 257 aaKnown RBP26.83■■□□□ 1.89
VPS16-201ENST00000380443 KRT40Q6A162 431 aa26.83■■□□□ 1.89
VPS16-201ENST00000380443 RPGRQ92834 1020 aaKnown RBP26.83■■□□□ 1.89
VPS16-201ENST00000380443 ANKIB1Q9P2G1 1089 aa26.83■■□□□ 1.89
VPS16-201ENST00000380443 CCDC88AQ3V6T2 1871 aa26.83■■□□□ 1.89
VPS16-201ENST00000380443 KIAA1551Q9HCM1 1747 aa26.83■■□□□ 1.88
VPS16-201ENST00000380443 PPFIA3O75145 1194 aa26.82■■□□□ 1.88
VPS16-201ENST00000380443 GYS1P13807 737 aa26.82■■□□□ 1.88
VPS16-201ENST00000380443 DYNLL1P63167 89 aaKnown RBP26.82■■□□□ 1.88
VPS16-201ENST00000380443 SF3A1Q15459 793 aaKnown RBP26.82■■□□□ 1.88
VPS16-201ENST00000380443 CAMK4Q16566 473 aa26.82■■□□□ 1.88
VPS16-201ENST00000380443 SBK1Q52WX2 424 aa26.82■■□□□ 1.88
VPS16-201ENST00000380443 OTUD7BQ6GQQ9 843 aa26.82■■□□□ 1.88
VPS16-201ENST00000380443 ZNF804AQ7Z570 1209 aa26.82■■□□□ 1.88
VPS16-201ENST00000380443 ORC4O43929 436 aa26.81■■□□□ 1.88
VPS16-201ENST00000380443 MSNP26038 577 aaKnown RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms