RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 PATL2C9JE40 543 aaKnown RBP29.24■■■□□ 2.27
TM6SF1-204ENST00000379390 SAP30BPQ9UHR5 308 aaKnown RBP29.24■■■□□ 2.27
TM6SF1-204ENST00000379390 SIPA1L1O43166 1804 aa29.24■■■□□ 2.27
TM6SF1-204ENST00000379390 SLC4A8Q2Y0W8 1093 aa29.23■■■□□ 2.27
TM6SF1-204ENST00000379390 ZFPM1Q8IX07 1006 aa29.23■■■□□ 2.27
TM6SF1-204ENST00000379390 LSG1Q9H089 658 aaKnown RBP29.23■■■□□ 2.27
TM6SF1-204ENST00000379390 ATP8A2Q9NTI2 1148 aa29.23■■■□□ 2.27
TM6SF1-204ENST00000379390 MKRN1Q9UHC7 482 aaKnown RBP29.23■■■□□ 2.27
TM6SF1-204ENST00000379390 SEC24BO95487 1268 aa29.23■■■□□ 2.27
TM6SF1-204ENST00000379390 FKBP1CQ5VVH2 108 aa29.23■■■□□ 2.27
TM6SF1-204ENST00000379390 APOBEC3FQ8IUX4 373 aaKnown RBP29.23■■■□□ 2.27
TM6SF1-204ENST00000379390 IFNL3Q8IZI9 196 aa29.23■■■□□ 2.27
TM6SF1-204ENST00000379390 CLEC11AQ9Y240 323 aa29.23■■■□□ 2.27
TM6SF1-204ENST00000379390 TDO2P48775 406 aa29.22■■■□□ 2.27
TM6SF1-204ENST00000379390 DCPSQ96C86 337 aaKnown RBP29.22■■■□□ 2.27
TM6SF1-204ENST00000379390 DSCC1Q9BVC3 393 aa29.22■■■□□ 2.27
TM6SF1-204ENST00000379390 OSBPL5Q9H0X9 879 aaPredicted RBP29.22■■■□□ 2.27
TM6SF1-204ENST00000379390 PITPNM2Q9BZ72 1349 aa29.22■■■□□ 2.27
TM6SF1-204ENST00000379390 REC8O95072 547 aa29.21■■■□□ 2.27
TM6SF1-204ENST00000379390 MYH8P13535 1937 aa29.21■■■□□ 2.27
TM6SF1-204ENST00000379390 TNFAIP1Q13829 316 aa29.21■■■□□ 2.27
TM6SF1-204ENST00000379390 ZC3H15Q8WU90 426 aaKnown RBP29.21■■■□□ 2.27
TM6SF1-204ENST00000379390 DDRGK1Q96HY6 314 aa29.21■■■□□ 2.27
TM6SF1-204ENST00000379390 RPAP1Q9BWH6 1393 aaPredicted RBP29.21■■■□□ 2.27
TM6SF1-204ENST00000379390 NACAP1Q9BZK3 213 aa29.21■■■□□ 2.27
TM6SF1-204ENST00000379390 NAPBQ9H115 298 aa29.21■■■□□ 2.27
TM6SF1-204ENST00000379390 MCM9Q9NXL9 1143 aa29.21■■■□□ 2.27
TM6SF1-204ENST00000379390 RASA3Q14644 834 aa29.2■■■□□ 2.27
TM6SF1-204ENST00000379390 TMEM39BQ9GZU3 492 aa29.2■■■□□ 2.27
TM6SF1-204ENST00000379390 PALD1Q9ULE6 856 aa29.2■■■□□ 2.27
TM6SF1-204ENST00000379390 ENTPD3O75355 529 aa29.2■■■□□ 2.26
TM6SF1-204ENST00000379390 NPM3O75607 178 aaKnown RBP29.19■■■□□ 2.26
TM6SF1-204ENST00000379390 FGAP02671 866 aa29.19■■■□□ 2.26
TM6SF1-204ENST00000379390 TNNI2P48788 182 aa29.19■■■□□ 2.26
TM6SF1-204ENST00000379390 GIMAP6Q6P9H5 292 aa29.19■■■□□ 2.26
TM6SF1-204ENST00000379390 FAM83AQ86UY5 434 aa29.19■■■□□ 2.26
TM6SF1-204ENST00000379390 DEFB129Q9H1M3 183 aa29.19■■■□□ 2.26
TM6SF1-204ENST00000379390 PGAP2Q9UHJ9 254 aa29.19■■■□□ 2.26
TM6SF1-204ENST00000379390 CYP2D7A0A087X1C5 515 aa29.18■■■□□ 2.26
TM6SF1-204ENST00000379390 EVX2Q03828 476 aa29.18■■■□□ 2.26
TM6SF1-204ENST00000379390 LDHDQ86WU2 507 aa29.18■■■□□ 2.26
TM6SF1-204ENST00000379390 ZSCAN29Q8IWY8 852 aaPredicted RBP29.18■■■□□ 2.26
TM6SF1-204ENST00000379390 CDAN1Q8IWY9 1227 aa29.18■■■□□ 2.26
TM6SF1-204ENST00000379390 FAM151AQ8WW52 585 aa29.18■■■□□ 2.26
TM6SF1-204ENST00000379390 MAP4K1Q92918 833 aa29.18■■■□□ 2.26
TM6SF1-204ENST00000379390 USP17L12C9JPN9 530 aa29.17■■■□□ 2.26
TM6SF1-204ENST00000379390 ADM5C9JUS6 153 aa29.17■■■□□ 2.26
TM6SF1-204ENST00000379390 USP17L21D6R901 530 aa29.17■■■□□ 2.26
TM6SF1-204ENST00000379390 CYP2D6P10635 497 aa29.17■■■□□ 2.26
TM6SF1-204ENST00000379390 SH3BP5LQ7L8J4 393 aa29.17■■■□□ 2.26
TM6SF1-204ENST00000379390 KRT26Q7Z3Y9 468 aa29.17■■■□□ 2.26
TM6SF1-204ENST00000379390 SULF1Q8IWU6 871 aa29.17■■■□□ 2.26
TM6SF1-204ENST00000379390 COL2A1P02458 1487 aaPredicted RBP29.17■■■□□ 2.26
TM6SF1-204ENST00000379390 DDTLA6NHG4 134 aaPredicted RBP29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 ALX1Q15699 326 aa29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 MAP1SQ66K74 1059 aaPredicted RBP29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 CTR9Q6PD62 1173 aa29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 DLK2Q6UY11 383 aa29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 RBM8AQ9Y5S9 174 aaKnown RBP29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 ZMYM6O95789 1325 aa29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 SMIM22K7EJ46 135 aa29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 PRAMEF18Q5VWM3 479 aa29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 ZNF784Q8NCA9 323 aaPredicted RBP29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 BACH2Q9BYV9 841 aa29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 ARPP21Q9UBL0 812 aaPredicted RBP29.16■■■□□ 2.26
TM6SF1-204ENST00000379390 ATRNL1Q5VV63 1379 aa29.15■■■□□ 2.26
TM6SF1-204ENST00000379390 POLR3DP05423 398 aaPredicted RBP29.15■■■□□ 2.26
TM6SF1-204ENST00000379390 GLIS2Q9BZE0 524 aaPredicted RBP29.15■■■□□ 2.26
TM6SF1-204ENST00000379390 U3KPZ7 1027 aaPredicted RBP29.15■■■□□ 2.26
TM6SF1-204ENST00000379390 MINDY4BA8MYZ0 360 aa29.14■■■□□ 2.26
TM6SF1-204ENST00000379390 KIF3CO14782 793 aa29.14■■■□□ 2.26
TM6SF1-204ENST00000379390 HAND2P61296 217 aa29.13■■■□□ 2.25
TM6SF1-204ENST00000379390 USP48Q86UV5 1035 aa29.13■■■□□ 2.25
TM6SF1-204ENST00000379390 TEPSINQ96N21 525 aa29.13■■■□□ 2.25
TM6SF1-204ENST00000379390 CSRNP1Q96S65 589 aa29.13■■■□□ 2.25
TM6SF1-204ENST00000379390 PLCD1P51178 756 aa29.12■■■□□ 2.25
TM6SF1-204ENST00000379390 AMOTL1Q8IY63 956 aa29.12■■■□□ 2.25
TM6SF1-204ENST00000379390 SBK1Q52WX2 424 aa29.12■■■□□ 2.25
TM6SF1-204ENST00000379390 C12orf60Q5U649 245 aa29.12■■■□□ 2.25
TM6SF1-204ENST00000379390 STK11IPQ8N1F8 1099 aa29.12■■■□□ 2.25
TM6SF1-204ENST00000379390 USP26Q9BXU7 913 aa29.12■■■□□ 2.25
TM6SF1-204ENST00000379390 DHX36Q9H2U1 1008 aaKnown RBP29.12■■■□□ 2.25
TM6SF1-204ENST00000379390 CTNNA3Q9UI47 895 aa29.12■■■□□ 2.25
TM6SF1-204ENST00000379390 SLURP2P0DP57 97 aa29.11■■■□□ 2.25
TM6SF1-204ENST00000379390 PPP2R3BQ9Y5P8 575 aa29.11■■■□□ 2.25
TM6SF1-204ENST00000379390 HLA-DOAP06340 250 aa29.1■■■□□ 2.25
TM6SF1-204ENST00000379390 PPARAQ07869 468 aa29.1■■■□□ 2.25
TM6SF1-204ENST00000379390 CDC37L1Q7L3B6 337 aa29.1■■■□□ 2.25
TM6SF1-204ENST00000379390 TRPM7Q96QT4 1865 aa29.09■■■□□ 2.25
TM6SF1-204ENST00000379390 EIF5BO60841 1220 aaKnown RBP29.09■■■□□ 2.25
TM6SF1-204ENST00000379390 CTDSPL2Q05D32 466 aa29.09■■■□□ 2.25
TM6SF1-204ENST00000379390 IMMTQ16891 758 aaKnown RBP29.09■■■□□ 2.25
TM6SF1-204ENST00000379390 NBPF12Q5TAG4 269 aaPredicted RBP29.09■■■□□ 2.25
TM6SF1-204ENST00000379390 TTC6Q86TZ1 520 aa29.09■■■□□ 2.25
TM6SF1-204ENST00000379390 SSC5DA1L4H1 1573 aa29.09■■■□□ 2.25
TM6SF1-204ENST00000379390 NECTIN1Q15223 517 aa29.09■■■□□ 2.25
TM6SF1-204ENST00000379390 CHADLQ6NUI6 762 aa29.09■■■□□ 2.25
TM6SF1-204ENST00000379390 NBPF3Q9H094 633 aa29.09■■■□□ 2.25
TM6SF1-204ENST00000379390 FAM196BA6NMK8 535 aa29.08■■■□□ 2.25
TM6SF1-204ENST00000379390 TRAF5O00463 557 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms