RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 C8orf76Q96K31 380 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 FUCA2Q9BTY2 467 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 TFIP11Q9UBB9 837 aaKnown RBP12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 ORC3Q9UBD5 711 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 NEDD4P46934 1319 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 COL1A1P02452 1464 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 MAGEB6P1A0A0J9YX57 407 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 ESPNB1AK53 854 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 B4E1Z4 1266 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 CLCN1P35523 988 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 GYG1P46976 350 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 MAP3K11Q16584 847 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 GIMAP6Q6P9H5 292 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 APOA5Q6Q788 366 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 TMTC2Q8N394 836 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 IGDCC4Q8TDY8 1250 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 FAM84BQ96KN1 310 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 GPHNQ9NQX3 736 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 RAI14Q9P0K7 980 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 ANAPC4Q9UJX5 808 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 BRCA1P38398 1863 aaKnown RBP12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 CCDC88AQ3V6T2 1871 aa12.22□□□□□ -0.45
POLR2J3-201ENST00000379340 STK36Q9NRP7 1315 aa12.21□□□□□ -0.45
POLR2J3-201ENST00000379340 DUOX1Q9NRD9 1551 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 ZBTB43O43298 467 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 KCNA3P22001 575 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 ADD1P35611 737 aaKnown RBP12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 TMEM67Q5HYA8 995 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 SYNE3Q6ZMZ3 975 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 NFXL1Q6ZNB6 911 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 RBM43Q6ZSC3 357 aaKnown RBP12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 FBXO18Q8NFZ0 1043 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 BICD2Q8TD16 824 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 BRIP1Q9BX63 1249 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 CLSTN2Q9H4D0 955 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 RRAGCQ9HB90 399 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 LY9Q9HBG7 655 aa12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 RTN4Q9NQC3 1192 aaKnown RBP12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 TNRC6CQ9HCJ0 1690 aaKnown RBP12.21□□□□□ -0.46
POLR2J3-201ENST00000379340 ERICH2A1L162 156 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 CCDC69A6NI79 296 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 IFIT3O14879 490 aaKnown RBP12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 CTAGE5O15320 804 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 LIG1P18858 919 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 HIBADHP31937 336 aaKnown RBP12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 TGFB2P61812 414 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 PPARAQ07869 468 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 RNF214Q8ND24 703 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 WASF1Q92558 559 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 PGBD1Q96JS3 809 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 TNMDQ9H2S6 317 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 RRAGDQ9NQL2 400 aaPredicted RBP12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 RTEL1Q9NZ71 1219 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 ABCF2Q9UG63 623 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 ECM29Q5VYK3 1845 aa12.2□□□□□ -0.46
POLR2J3-201ENST00000379340 LAMB1P07942 1786 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 GOLGA8AA7E2F4 631 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 KDM4AO75164 1064 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 YEATS4O95619 227 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 CAVIN2O95810 425 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 NT5C2P49902 561 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 CTDSPL2Q05D32 466 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 FSTL1Q12841 308 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 PPP2R5BQ15173 497 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 SPTY2D1Q68D10 685 aaPredicted RBP12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 ZSCAN30Q86W11 494 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 RIOK1Q9BRS2 568 aaKnown RBP12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 DACT1Q9NYF0 836 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 ZSWIM5Q9P217 1185 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 CCDC39Q9UFE4 941 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 LEMD3Q9Y2U8 911 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 SLC12A7Q9Y666 1083 aa12.19□□□□□ -0.46
POLR2J3-201ENST00000379340 PCNTO95613 3336 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 CCDC196A0A1B0GTZ2 297 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 NPHP1O15259 732 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 PRKAB2O43741 272 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 TM4SF1P30408 202 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 GRAPQ13588 217 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 WTAPQ15007 396 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 CCDC73Q6ZRK6 1079 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 MIGA1Q8NAN2 632 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 GRAPLQ8TC17 118 aaPredicted RBP12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 ESR2Q92731 530 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 USP28Q96RU2 1077 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 DLEC1Q9Y238 1755 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 HSPA1AP0DMV8 641 aaKnown RBP12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 HSPA1BP0DMV9 641 aaKnown RBP12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 IARSP41252 1262 aaKnown RBP12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 FOSBP53539 338 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 C15orf52Q6ZUT6 534 aaKnown RBP12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 CNBD1Q8NA66 436 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 KCNG4Q8TDN1 519 aa12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 IQSEC3Q9UPP2 1182 aaPredicted RBP12.18□□□□□ -0.46
POLR2J3-201ENST00000379340 IRS2Q9Y4H2 1338 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 A0A1W2PQ27 194 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 A0A1W2PQ64 194 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 A0A1W2PQD8 194 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 GYS1P13807 737 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms