RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 PCDHB15Q9Y5E8 787 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 DNM1Q05193 864 aaKnown RBP12.28□□□□□ -0.44
LINC00654-201ENST00000379053 C6orf163Q5TEZ5 329 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 PIK3AP1Q6ZUJ8 805 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 V9GY48 417 aaPredicted RBP12.28□□□□□ -0.44
LINC00654-201ENST00000379053 MROH5Q6ZUA9 1318 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 ADCY7P51828 1080 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 KIF5AQ12840 1032 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 RASA3Q14644 834 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 GADL1Q6ZQY3 521 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 KIFAP3Q92845 792 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 TMEM87BQ96K49 555 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 TXKP42681 527 aa12.27□□□□□ -0.44
LINC00654-201ENST00000379053 APPBP2Q92624 585 aa12.27□□□□□ -0.44
LINC00654-201ENST00000379053 MAP3K1Q13233 1512 aa12.27□□□□□ -0.44
LINC00654-201ENST00000379053 CCDC129Q6ZRS4 1044 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 MICALCLQ6ZW33 695 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 ARMC9Q7Z3E5 817 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 DEXIO95424 95 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 KRT9P35527 623 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 AK2P54819 239 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 KRT83P78385 493 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 SPATA5Q8NB90 893 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 RNF169Q8NCN4 708 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 UBE2Q2Q8WVN8 375 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 DCTPP1Q9H773 170 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 ODF2LQ9ULJ1 636 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.45
LINC00654-201ENST00000379053 GPAA1O43292 621 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 DAPK3O43293 454 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 HSF2BPO75031 334 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 FMNL3Q8IVF7 1028 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 NOX5Q96PH1 765 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 GIMAP7Q8NHV1 300 aa12.27□□□□□ -0.45
LINC00654-201ENST00000379053 KDM2BQ8NHM5 1336 aa12.26□□□□□ -0.45
LINC00654-201ENST00000379053 G2E3Q7L622 706 aa12.26□□□□□ -0.45
LINC00654-201ENST00000379053 BABAM1Q9NWV8 329 aa12.26□□□□□ -0.45
LINC00654-201ENST00000379053 HOXB7P09629 217 aa12.26□□□□□ -0.45
LINC00654-201ENST00000379053 RUFY3Q7L099 469 aa12.26□□□□□ -0.45
LINC00654-201ENST00000379053 ZNF496Q96IT1 587 aaPredicted RBP12.26□□□□□ -0.45
LINC00654-201ENST00000379053 TRERF1Q96PN7 1200 aa12.26□□□□□ -0.45
LINC00654-201ENST00000379053 DDX23Q9BUQ8 820 aaKnown RBP12.26□□□□□ -0.45
LINC00654-201ENST00000379053 FAM107BQ9H098 131 aa12.26□□□□□ -0.45
LINC00654-201ENST00000379053 ATP10AO60312 1499 aa12.26□□□□□ -0.45
LINC00654-201ENST00000379053 TCP10L2B9ZVM9 353 aa12.26□□□□□ -0.45
LINC00654-201ENST00000379053 TBC1D32Q96NH3 1257 aa12.26□□□□□ -0.45
LINC00654-201ENST00000379053 POLR3GO15318 223 aaPredicted RBP12.26□□□□□ -0.45
LINC00654-201ENST00000379053 ZHX1Q9UKY1 873 aaPredicted RBP12.26□□□□□ -0.45
LINC00654-201ENST00000379053 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
LINC00654-201ENST00000379053 ERVV-2B6SEH9 535 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 ATP2A2P16615 1042 aaKnown RBP12.25□□□□□ -0.45
LINC00654-201ENST00000379053 CHURC1Q8WUH1 139 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 LEO1Q8WVC0 666 aaPredicted RBP12.25□□□□□ -0.45
LINC00654-201ENST00000379053 DNAJC25Q9H1X3 360 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 MLXIPQ9HAP2 919 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 KRT86O43790 486 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 KRT19P08727 400 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 MXRA7P84157 204 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 DOK7Q18PE1 504 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 NLRX1Q86UT6 975 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 KIAA0825Q8IV33 1275 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 CALCOCO1Q9P1Z2 691 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 AGTPBP1Q9UPW5 1226 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 CTAGE15A4D2H0 777 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 CTAGE8P0CG41 777 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 CTAGE6Q86UF2 777 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 CTAGE4Q8IX94 777 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 UVSSAQ2YD98 709 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 KMT5BQ4FZB7 885 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 HOXD10P28358 340 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 PDE4DQ08499 809 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 RILPL1Q5EBL4 403 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 CCDC114Q96M63 670 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 STK24Q9Y6E0 443 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 PRAG1Q86YV5 1406 aa12.25□□□□□ -0.45
LINC00654-201ENST00000379053 TRIM37O94972 964 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 GNPTABQ3T906 1256 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 NONOQ15233 471 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00654-201ENST00000379053 UIMC1Q96RL1 719 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 CFAP58Q5T655 872 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 C2orf69Q8N8R5 385 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 NR1I2O75469 434 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 CTDSPL2Q05D32 466 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 GCKRQ14397 625 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 PPP1R7Q15435 360 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 INF2Q27J81 1249 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 FBF1Q8TES7 1133 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 E7EVH7 732 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 CALUO43852 315 aaPredicted RBP12.24□□□□□ -0.45
LINC00654-201ENST00000379053 ATP2B4P23634 1241 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 METTL13Q8N6R0 699 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 FAM200AQ8TCP9 573 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 FAM204AQ9H8W3 233 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
LINC00654-201ENST00000379053 SYT1P21579 422 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 CHMLP26374 656 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 SCNN1DP51172 638 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 TFAP4Q01664 338 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 GABPAQ06546 454 aa12.23□□□□□ -0.45
LINC00654-201ENST00000379053 ANGEL1Q9UNK9 670 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms