RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.36□□□□□ -0.91
PTPRR-203ENST00000378778 TARSL2A2RTX5 802 aaKnown RBP9.36□□□□□ -0.91
PTPRR-203ENST00000378778 CTAGE15A4D2H0 777 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 VGLL3A8MV65 326 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 BIN1O00499 593 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 DTNBO60941 627 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 CTAGE8P0CG41 777 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 MDM2Q00987 491 aaPredicted RBP9.36□□□□□ -0.91
PTPRR-203ENST00000378778 MORC3Q14149 939 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 PROSER3Q2NL68 480 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 SWT1Q5T5J6 900 aaKnown RBP9.36□□□□□ -0.91
PTPRR-203ENST00000378778 CCDC129Q6ZRS4 1044 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 CTAGE6Q86UF2 777 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 PPFIBP1Q86W92 1011 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 TMTC1Q8IUR5 882 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 CTAGE4Q8IX94 777 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 KRI1Q8N9T8 703 aaKnown RBP9.36□□□□□ -0.91
PTPRR-203ENST00000378778 DBNDD2Q9BQY9 259 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 TACO1Q9BSH4 297 aaKnown RBP9.36□□□□□ -0.91
PTPRR-203ENST00000378778 NCOA5Q9HCD5 579 aaKnown RBP9.36□□□□□ -0.91
PTPRR-203ENST00000378778 KCNH3Q9ULD8 1083 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 CEP131Q9UPN4 1083 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 MROH7-TTC4A0A0A0MT08 1334 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 MAST3O60307 1309 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 ECM29Q5VYK3 1845 aa9.36□□□□□ -0.91
PTPRR-203ENST00000378778 GOLGA8BA8MQT2 603 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 H3BQF6 201 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 CLSTN1O94985 981 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 GUCY2CP25092 1073 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 USP8P40818 1118 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 PLCD1P51178 756 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 GTF2A1P52655 376 aaPredicted RBP9.35□□□□□ -0.91
PTPRR-203ENST00000378778 TRIM29Q14134 588 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 FILIP1LQ4L180 1135 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 SHC4Q6S5L8 630 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 ZNF662Q6ZS27 426 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 RALYLQ86SE5 291 aaKnown RBP9.35□□□□□ -0.91
PTPRR-203ENST00000378778 C10orf67Q8IYJ2 551 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 MAP3K14Q99558 947 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 LRRC2Q9BYS8 371 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 INTS13Q9NVM9 706 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 TBC1D2BQ9UPU7 963 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 HPS5Q9UPZ3 1129 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 ATXN2Q99700 1313 aaKnown RBP9.35□□□□□ -0.91
PTPRR-203ENST00000378778 A0A087WUV0 522 aaPredicted RBP9.35□□□□□ -0.91
PTPRR-203ENST00000378778 KLF18A0A0U1RQI7 1052 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 PRC1O43663 620 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 WDHD1O75717 1129 aaPredicted RBP9.35□□□□□ -0.91
PTPRR-203ENST00000378778 ANXA1P04083 346 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 METTL16Q86W50 562 aaKnown RBP9.35□□□□□ -0.91
PTPRR-203ENST00000378778 SPATA20Q8TB22 786 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 TMEM87BQ96K49 555 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 NAPGQ99747 312 aaPredicted RBP9.35□□□□□ -0.91
PTPRR-203ENST00000378778 MTA3Q9BTC8 594 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 PDE11AQ9HCR9 933 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 VPS18Q9P253 973 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 RCAN1P53805 252 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 GUCY1B3Q02153 619 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 SPAG1Q07617 926 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 POSTNQ15063 836 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 TTC39AQ5SRH9 613 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 ANKRD13DQ6ZTN6 518 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 SEC62Q99442 399 aaKnown RBP9.35□□□□□ -0.91
PTPRR-203ENST00000378778 DEF6Q9H4E7 631 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 ZCCHC17Q9NP64 241 aaKnown RBP9.35□□□□□ -0.91
PTPRR-203ENST00000378778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTPRR-203ENST00000378778 PCDHA5Q9Y5H7 936 aa9.35□□□□□ -0.91
PTPRR-203ENST00000378778 ATRNO75882 1429 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 A0A087WWV3 80 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 POLR3DP05423 398 aaPredicted RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 LTKP29376 864 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 PBX1P40424 430 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 SEMA3FQ13275 785 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 CASP8Q14790 479 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 DNAJC21Q5F1R6 531 aaKnown RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 SPATA1Q5VX52 437 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 GBP6Q6ZN66 633 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 TOGARAM2Q6ZUX3 1019 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 DDX46Q7L014 1031 aaKnown RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 VPS37DQ86XT2 251 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 PDILTQ8N807 584 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 EDC3Q96F86 508 aaKnown RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 LTV1Q96GA3 475 aaPredicted RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 CEP89Q96ST8 783 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 PYM1Q9BRP8 204 aaKnown RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 WWC3Q9ULE0 1092 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 NFE2L3Q9Y4A8 694 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 MST1RQ04912 1400 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 PXDNQ92626 1479 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 COL22A1Q8NFW1 1626 aaPredicted RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 EIF3CLB5ME19 914 aaKnown RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 TMEM232C9JQI7 657 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 BMP15O95972 392 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 CASP7P55210 303 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 TRDNQ13061 729 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 EPHA10Q5JZY3 1008 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 MPRIPQ6WCQ1 1025 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 SPATS2Q86XZ4 545 aaKnown RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 EHBP1Q8NDI1 1231 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms