RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 MS4A4AQ96JQ5 239 aa18.82■□□□□ 0.6
RAB4B-202ENST00000378307 PTPN18Q99952 460 aa18.82■□□□□ 0.6
RAB4B-202ENST00000378307 ZNF341Q9BYN7 854 aa18.82■□□□□ 0.6
RAB4B-202ENST00000378307 CDK5RAP2Q96SN8 1893 aa18.82■□□□□ 0.6
RAB4B-202ENST00000378307 MANSC4A6NHS7 340 aaPredicted RBP18.81■□□□□ 0.6
RAB4B-202ENST00000378307 SMARCA5O60264 1052 aaPredicted RBP18.81■□□□□ 0.6
RAB4B-202ENST00000378307 RAB11FIP3O75154 756 aa18.81■□□□□ 0.6
RAB4B-202ENST00000378307 DCAF15Q66K64 600 aa18.81■□□□□ 0.6
RAB4B-202ENST00000378307 NAA16Q6N069 864 aaPredicted RBP18.81■□□□□ 0.6
RAB4B-202ENST00000378307 IFNL1Q8IU54 200 aa18.81■□□□□ 0.6
RAB4B-202ENST00000378307 CLASRPQ8N2M8 674 aaKnown RBP18.81■□□□□ 0.6
RAB4B-202ENST00000378307 SH3RF3Q8TEJ3 882 aaPredicted RBP18.81■□□□□ 0.6
RAB4B-202ENST00000378307 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
RAB4B-202ENST00000378307 ZNF112Q9UJU3 913 aa18.81■□□□□ 0.6
RAB4B-202ENST00000378307 PCDHB15Q9Y5E8 787 aa18.81■□□□□ 0.6
RAB4B-202ENST00000378307 CSADQ9Y600 493 aa18.81■□□□□ 0.6
RAB4B-202ENST00000378307 TESPA1A2RU30 521 aaPredicted RBP18.8■□□□□ 0.6
RAB4B-202ENST00000378307 CAPN15O75808 1086 aa18.8■□□□□ 0.6
RAB4B-202ENST00000378307 HOOK2Q96ED9 719 aa18.8■□□□□ 0.6
RAB4B-202ENST00000378307 OTUD5Q96G74 571 aa18.8■□□□□ 0.6
RAB4B-202ENST00000378307 SPDYE5A6NIY4 337 aa18.79■□□□□ 0.6
RAB4B-202ENST00000378307 PHF20L1A8MW92 1017 aa18.79■□□□□ 0.6
RAB4B-202ENST00000378307 INHBEP58166 350 aa18.79■□□□□ 0.6
RAB4B-202ENST00000378307 MAP3K10Q02779 954 aa18.79■□□□□ 0.6
RAB4B-202ENST00000378307 IDH1O75874 414 aaKnown RBP18.78■□□□□ 0.6
RAB4B-202ENST00000378307 IFIT2P09913 472 aaKnown RBP18.78■□□□□ 0.6
RAB4B-202ENST00000378307 PPP4CP60510 307 aa18.78■□□□□ 0.6
RAB4B-202ENST00000378307 DYNLL1P63167 89 aaKnown RBP18.78■□□□□ 0.6
RAB4B-202ENST00000378307 ERO1BQ86YB8 467 aa18.78■□□□□ 0.6
RAB4B-202ENST00000378307 ZSCAN29Q8IWY8 852 aaPredicted RBP18.78■□□□□ 0.6
RAB4B-202ENST00000378307 TEX11Q8IYF3 940 aa18.78■□□□□ 0.6
RAB4B-202ENST00000378307 BRI3BPQ8WY22 251 aa18.78■□□□□ 0.6
RAB4B-202ENST00000378307 EDC3Q96F86 508 aaKnown RBP18.78■□□□□ 0.6
RAB4B-202ENST00000378307 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
RAB4B-202ENST00000378307 FOCADQ5VW36 1801 aa18.77■□□□□ 0.6
RAB4B-202ENST00000378307 IRF6O14896 467 aa18.77■□□□□ 0.6
RAB4B-202ENST00000378307 NPM3O75607 178 aaKnown RBP18.77■□□□□ 0.6
RAB4B-202ENST00000378307 CYP7A1P22680 504 aa18.77■□□□□ 0.6
RAB4B-202ENST00000378307 MAGEB6Q8N7X4 407 aa18.77■□□□□ 0.6
RAB4B-202ENST00000378307 CFHR5Q9BXR6 569 aa18.77■□□□□ 0.6
RAB4B-202ENST00000378307 MCOLN1Q9GZU1 580 aa18.77■□□□□ 0.6
RAB4B-202ENST00000378307 OSBPL5Q9H0X9 879 aaPredicted RBP18.77■□□□□ 0.6
RAB4B-202ENST00000378307 DCTPP1Q9H773 170 aa18.77■□□□□ 0.6
RAB4B-202ENST00000378307 FAM196BA6NMK8 535 aa18.76■□□□□ 0.59
RAB4B-202ENST00000378307 GPR25O00155 361 aa18.76■□□□□ 0.59
RAB4B-202ENST00000378307 MAP4K4O95819 1239 aaPredicted RBP18.76■□□□□ 0.59
RAB4B-202ENST00000378307 MIGA1Q8NAN2 632 aa18.76■□□□□ 0.59
RAB4B-202ENST00000378307 ZNF296Q8WUU4 475 aaPredicted RBP18.76■□□□□ 0.59
RAB4B-202ENST00000378307 LRRCC1Q9C099 1032 aa18.76■□□□□ 0.59
RAB4B-202ENST00000378307 SIPA1L1O43166 1804 aa18.76■□□□□ 0.59
RAB4B-202ENST00000378307 CCL15-CCL14A0A0B4J2E2 113 aa18.75■□□□□ 0.59
RAB4B-202ENST00000378307 DGKZQ13574 1117 aa18.75■□□□□ 0.59
RAB4B-202ENST00000378307 CCL15Q16663 113 aa18.75■□□□□ 0.59
RAB4B-202ENST00000378307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.75■□□□□ 0.59
RAB4B-202ENST00000378307 TGFBRAP1Q8WUH2 860 aa18.75■□□□□ 0.59
RAB4B-202ENST00000378307 ABHD8Q96I13 439 aa18.75■□□□□ 0.59
RAB4B-202ENST00000378307 BOLA2Q9H3K6 86 aa18.75■□□□□ 0.59
RAB4B-202ENST00000378307 GOLIM4O00461 696 aa18.74■□□□□ 0.59
RAB4B-202ENST00000378307 BAG3O95817 575 aa18.74■□□□□ 0.59
RAB4B-202ENST00000378307 GTF2A2P52657 109 aa18.74■□□□□ 0.59
RAB4B-202ENST00000378307 PPIL2Q13356 520 aa18.74■□□□□ 0.59
RAB4B-202ENST00000378307 RRP1BQ14684 758 aaKnown RBP18.74■□□□□ 0.59
RAB4B-202ENST00000378307 NOL9Q5SY16 702 aaKnown RBP18.74■□□□□ 0.59
RAB4B-202ENST00000378307 MAPKAPK5Q8IW41 473 aa18.74■□□□□ 0.59
RAB4B-202ENST00000378307 FAM43AQ8N2R8 423 aa18.74■□□□□ 0.59
RAB4B-202ENST00000378307 DNAJC2Q99543 621 aaKnown RBP18.74■□□□□ 0.59
RAB4B-202ENST00000378307 NOL10Q9BSC4 688 aaKnown RBP18.74■□□□□ 0.59
RAB4B-202ENST00000378307 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.74■□□□□ 0.59
RAB4B-202ENST00000378307 PHIPQ8WWQ0 1821 aa18.73■□□□□ 0.59
RAB4B-202ENST00000378307 IGSF3O75054 1194 aa18.73■□□□□ 0.59
RAB4B-202ENST00000378307 ALDH1A1P00352 501 aa18.73■□□□□ 0.59
RAB4B-202ENST00000378307 PPATQ06203 517 aa18.73■□□□□ 0.59
RAB4B-202ENST00000378307 CRHR2Q13324 411 aa18.73■□□□□ 0.59
RAB4B-202ENST00000378307 SLFNL1Q499Z3 407 aa18.73■□□□□ 0.59
RAB4B-202ENST00000378307 FLT1P17948 1338 aa18.73■□□□□ 0.59
RAB4B-202ENST00000378307 COL2A1P02458 1487 aaPredicted RBP18.72■□□□□ 0.59
RAB4B-202ENST00000378307 TBC1D12O60347 775 aa18.72■□□□□ 0.59
RAB4B-202ENST00000378307 CHGBP05060 677 aa18.72■□□□□ 0.59
RAB4B-202ENST00000378307 ATP5JP18859 108 aa18.72■□□□□ 0.59
RAB4B-202ENST00000378307 MAP3K12Q12852 859 aa18.72■□□□□ 0.59
RAB4B-202ENST00000378307 MOGSQ13724 837 aa18.72■□□□□ 0.59
RAB4B-202ENST00000378307 CCDC84Q86UT8 332 aaPredicted RBP18.72■□□□□ 0.59
RAB4B-202ENST00000378307 BTBD19C9JJ37 291 aa18.71■□□□□ 0.59
RAB4B-202ENST00000378307 PDE6AP16499 860 aa18.71■□□□□ 0.59
RAB4B-202ENST00000378307 PLCG2P16885 1265 aa18.71■□□□□ 0.59
RAB4B-202ENST00000378307 CAP1Q01518 475 aa18.71■□□□□ 0.59
RAB4B-202ENST00000378307 SNAPC2Q13487 334 aa18.71■□□□□ 0.59
RAB4B-202ENST00000378307 NOM1Q5C9Z4 860 aaKnown RBP18.71■□□□□ 0.59
RAB4B-202ENST00000378307 SCYL3Q8IZE3 742 aa18.71■□□□□ 0.59
RAB4B-202ENST00000378307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.71■□□□□ 0.59
RAB4B-202ENST00000378307 PALD1Q9ULE6 856 aa18.71■□□□□ 0.59
RAB4B-202ENST00000378307 KCNH4Q9UQ05 1017 aa18.71■□□□□ 0.59
RAB4B-202ENST00000378307 DOCK1Q14185 1865 aa18.71■□□□□ 0.59
RAB4B-202ENST00000378307 MYH1P12882 1939 aa18.7■□□□□ 0.58
RAB4B-202ENST00000378307 TCRBV5S4A2TA0A5A2 114 aa18.7■□□□□ 0.58
RAB4B-202ENST00000378307 FKTNO75072 461 aa18.7■□□□□ 0.58
RAB4B-202ENST00000378307 PTPRAP18433 802 aa18.7■□□□□ 0.58
RAB4B-202ENST00000378307 TTF1Q15361 905 aaPredicted RBP18.7■□□□□ 0.58
RAB4B-202ENST00000378307 SLC4A8Q2Y0W8 1093 aa18.7■□□□□ 0.58
RAB4B-202ENST00000378307 SLC9C2Q5TAH2 1124 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms