RNA–Protein interactions for RNA: ENST00000378206.5

DFFB-204, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-204ENST00000378206 UBR2Q8IWV8 1755 aa17.43■□□□□ 0.38
DFFB-204ENST00000378206 NCBP1Q09161 790 aaKnown RBP17.43■□□□□ 0.38
DFFB-204ENST00000378206 MAP3K12Q12852 859 aa17.43■□□□□ 0.38
DFFB-204ENST00000378206 ZNF827Q17R98 1081 aa17.43■□□□□ 0.38
DFFB-204ENST00000378206 USP49Q70CQ1 688 aa17.43■□□□□ 0.38
DFFB-204ENST00000378206 PDCL2Q8N4E4 241 aa17.43■□□□□ 0.38
DFFB-204ENST00000378206 MAP3K14Q99558 947 aa17.43■□□□□ 0.38
DFFB-204ENST00000378206 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
DFFB-204ENST00000378206 HSD3B7Q9H2F3 369 aa17.43■□□□□ 0.38
DFFB-204ENST00000378206 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
DFFB-204ENST00000378206 TOGARAM1Q9Y4F4 1720 aa17.42■□□□□ 0.38
DFFB-204ENST00000378206 CRKLP46109 303 aaKnown RBP17.42■□□□□ 0.38
DFFB-204ENST00000378206 MFSD6Q6ZSS7 791 aa17.42■□□□□ 0.38
DFFB-204ENST00000378206 C3orf67Q6ZVT6 689 aa17.42■□□□□ 0.38
DFFB-204ENST00000378206 JAG2Q9Y219 1238 aa17.42■□□□□ 0.38
DFFB-204ENST00000378206 AKAP11Q9UKA4 1901 aa17.42■□□□□ 0.38
DFFB-204ENST00000378206 FAM205CA6NFA0 338 aa17.42■□□□□ 0.38
DFFB-204ENST00000378206 BCL9O00512 1426 aa17.42■□□□□ 0.38
DFFB-204ENST00000378206 KCNQ2O43526 872 aa17.42■□□□□ 0.38
DFFB-204ENST00000378206 TOB1P50616 345 aaPredicted RBP17.42■□□□□ 0.38
DFFB-204ENST00000378206 BAZ2BQ9UIF8 2168 aaKnown RBP17.41■□□□□ 0.38
DFFB-204ENST00000378206 SLC5A1P13866 664 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 CDC25BP30305 580 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 ITPK1Q13572 414 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 CCDC94Q9BW85 323 aaPredicted RBP17.41■□□□□ 0.38
DFFB-204ENST00000378206 ABCC6O95255 1503 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 BMP6P22004 513 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 NLRP12P59046 1061 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 PDE4BQ07343 736 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 PTPN14Q15678 1187 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 AKNAD1Q5T1N1 836 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 CCDC112Q8NEF3 446 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 PCDHA5Q9Y5H7 936 aa17.41■□□□□ 0.38
DFFB-204ENST00000378206 TMEM232C9JQI7 657 aa17.4■□□□□ 0.38
DFFB-204ENST00000378206 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
DFFB-204ENST00000378206 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
DFFB-204ENST00000378206 EIF5P55010 431 aaKnown RBP17.4■□□□□ 0.38
DFFB-204ENST00000378206 METTL16Q86W50 562 aaKnown RBP17.4■□□□□ 0.38
DFFB-204ENST00000378206 CTIFO43310 598 aaKnown RBP17.4■□□□□ 0.38
DFFB-204ENST00000378206 CHRNDQ07001 517 aa17.4■□□□□ 0.38
DFFB-204ENST00000378206 SSRP1Q08945 709 aaKnown RBP17.4■□□□□ 0.38
DFFB-204ENST00000378206 TRIM29Q14134 588 aa17.4■□□□□ 0.38
DFFB-204ENST00000378206 CPLX2Q6PUV4 134 aaKnown RBP17.4■□□□□ 0.38
DFFB-204ENST00000378206 DIS3L2Q8IYB7 885 aaKnown RBP17.4■□□□□ 0.38
DFFB-204ENST00000378206 PCDHB6Q9Y5E3 794 aa17.4■□□□□ 0.38
DFFB-204ENST00000378206 SLIT2O94813 1529 aa17.4■□□□□ 0.38
DFFB-204ENST00000378206 CYP7A1P22680 504 aa17.39■□□□□ 0.38
DFFB-204ENST00000378206 E4F1Q66K89 784 aaPredicted RBP17.39■□□□□ 0.38
DFFB-204ENST00000378206 TICAM2Q86XR7 235 aa17.39■□□□□ 0.38
DFFB-204ENST00000378206 CCAR2Q8N163 923 aaKnown RBP17.39■□□□□ 0.38
DFFB-204ENST00000378206 UTP14AQ9BVJ6 771 aaKnown RBP17.39■□□□□ 0.38
DFFB-204ENST00000378206 FANCLQ9NW38 375 aa17.39■□□□□ 0.38
DFFB-204ENST00000378206 ZNF215Q9UL58 517 aaPredicted RBP17.39■□□□□ 0.38
DFFB-204ENST00000378206 PARP4Q9UKK3 1724 aaKnown RBP17.39■□□□□ 0.37
DFFB-204ENST00000378206 CASP1P29466 404 aa17.39■□□□□ 0.37
DFFB-204ENST00000378206 DYNLL1P63167 89 aaKnown RBP17.39■□□□□ 0.37
DFFB-204ENST00000378206 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
DFFB-204ENST00000378206 FANCCQ00597 558 aa17.39■□□□□ 0.37
DFFB-204ENST00000378206 SLC51AQ86UW1 340 aa17.39■□□□□ 0.37
DFFB-204ENST00000378206 ZNF512BQ96KM6 892 aaPredicted RBP17.39■□□□□ 0.37
DFFB-204ENST00000378206 KCNH3Q9ULD8 1083 aa17.39■□□□□ 0.37
DFFB-204ENST00000378206 NOM1Q5C9Z4 860 aaKnown RBP17.39■□□□□ 0.37
DFFB-204ENST00000378206 TMEM87BQ96K49 555 aa17.39■□□□□ 0.37
DFFB-204ENST00000378206 RAI14Q9P0K7 980 aa17.39■□□□□ 0.37
DFFB-204ENST00000378206 LRRN4CLQ8ND94 238 aa17.38■□□□□ 0.37
DFFB-204ENST00000378206 CNNM3Q8NE01 707 aa17.38■□□□□ 0.37
DFFB-204ENST00000378206 SHISA4Q96DD7 197 aa17.38■□□□□ 0.37
DFFB-204ENST00000378206 MROH5Q6ZUA9 1318 aa17.38■□□□□ 0.37
DFFB-204ENST00000378206 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
DFFB-204ENST00000378206 SMTNL1A8MU46 457 aa17.38■□□□□ 0.37
DFFB-204ENST00000378206 PRR29P0C7W0 189 aa17.38■□□□□ 0.37
DFFB-204ENST00000378206 TRMT44Q8IYL2 757 aaKnown RBP17.38■□□□□ 0.37
DFFB-204ENST00000378206 CABP5Q9NP86 173 aa17.38■□□□□ 0.37
DFFB-204ENST00000378206 HPSEQ9Y251 543 aa17.38■□□□□ 0.37
DFFB-204ENST00000378206 XIRP1Q702N8 1843 aaKnown RBP17.37■□□□□ 0.37
DFFB-204ENST00000378206 PLEKHG2Q9H7P9 1386 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 POLR2DO15514 142 aaKnown RBP17.37■□□□□ 0.37
DFFB-204ENST00000378206 CDKL5O76039 1030 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 SERPINC1P01008 464 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 WTAPQ15007 396 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 EARS2Q5JPH6 523 aaKnown RBP17.37■□□□□ 0.37
DFFB-204ENST00000378206 SGMS1Q86VZ5 419 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 TMX1Q9H3N1 280 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 NUTM2BA6NNL0 878 aaPredicted RBP17.37■□□□□ 0.37
DFFB-204ENST00000378206 NUTM2EB1AL46 878 aaPredicted RBP17.37■□□□□ 0.37
DFFB-204ENST00000378206 COBLO75128 1261 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 RTN1Q16799 776 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 NUTM2AQ8IVF1 878 aaPredicted RBP17.37■□□□□ 0.37
DFFB-204ENST00000378206 NOSTRINQ8IVI9 506 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 CCDC87Q9NVE4 849 aa17.37■□□□□ 0.37
DFFB-204ENST00000378206 LOC102724428A0A0B4J2F2 783 aa17.36■□□□□ 0.37
DFFB-204ENST00000378206 WNT7AO00755 349 aa17.36■□□□□ 0.37
DFFB-204ENST00000378206 KLRK1P26718 216 aa17.36■□□□□ 0.37
DFFB-204ENST00000378206 SIK1P57059 783 aa17.36■□□□□ 0.37
DFFB-204ENST00000378206 CFAP100Q494V2 611 aa17.36■□□□□ 0.37
DFFB-204ENST00000378206 NYAP1Q6ZVC0 841 aa17.36■□□□□ 0.37
DFFB-204ENST00000378206 FAM177A1Q8N128 213 aaPredicted RBP17.36■□□□□ 0.37
DFFB-204ENST00000378206 ANKRD7Q92527 254 aa17.36■□□□□ 0.37
DFFB-204ENST00000378206 VPS54Q9P1Q0 977 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms