RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 RBM28Q9NW13 759 aaKnown RBP14.99□□□□□ -0.01
NPHP4-203ENST00000378169 SETBP1Q9Y6X0 1596 aa14.99□□□□□ -0.01
NPHP4-203ENST00000378169 USO1O60763 962 aaKnown RBP14.99□□□□□ -0.01
NPHP4-203ENST00000378169 ERICH4A6NGS2 130 aa14.99□□□□□ -0.01
NPHP4-203ENST00000378169 EIF3JO75822 258 aaKnown RBP14.99□□□□□ -0.01
NPHP4-203ENST00000378169 USP8P40818 1118 aa14.99□□□□□ -0.01
NPHP4-203ENST00000378169 HLFQ16534 295 aa14.99□□□□□ -0.01
NPHP4-203ENST00000378169 ADCY9O60503 1353 aa14.98□□□□□ -0.01
NPHP4-203ENST00000378169 SPAG1Q07617 926 aa14.98□□□□□ -0.01
NPHP4-203ENST00000378169 PPP4R3BQ5MIZ7 849 aa14.98□□□□□ -0.01
NPHP4-203ENST00000378169 TAF3Q5VWG9 929 aa14.98□□□□□ -0.01
NPHP4-203ENST00000378169 JAKMIP3Q5VZ66 844 aa14.98□□□□□ -0.01
NPHP4-203ENST00000378169 KRT79Q5XKE5 535 aa14.98□□□□□ -0.01
NPHP4-203ENST00000378169 RBM17Q96I25 401 aaKnown RBP14.98□□□□□ -0.01
NPHP4-203ENST00000378169 PUS7LQ9H0K6 701 aaKnown RBP14.98□□□□□ -0.01
NPHP4-203ENST00000378169 DYNC1I1O14576 645 aa14.98□□□□□ -0.01
NPHP4-203ENST00000378169 CCT6AP40227 531 aaKnown RBP14.98□□□□□ -0.01
NPHP4-203ENST00000378169 SSR1P43307 286 aaKnown RBP14.98□□□□□ -0.01
NPHP4-203ENST00000378169 FTOQ9C0B1 505 aaKnown RBP eCLIP14.98□□□□□ -0.01
NPHP4-203ENST00000378169 BTBD18B2RXH4 712 aa14.98□□□□□ -0.01
NPHP4-203ENST00000378169 KARSQ15046 597 aaKnown RBP14.98□□□□□ -0.01
NPHP4-203ENST00000378169 NECTIN1Q15223 517 aa14.98□□□□□ -0.01
NPHP4-203ENST00000378169 PAXBP1Q9Y5B6 917 aa14.98□□□□□ -0.01
NPHP4-203ENST00000378169 SMARCC2Q8TAQ2 1214 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 DRC1Q96MC2 740 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 GPHNQ9NQX3 736 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-203ENST00000378169 ADGRL3Q9HAR2 1447 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 M0R2C6 588 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 POLR3GO15318 223 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-203ENST00000378169 TCP10Q12799 353 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 TTLL12Q14166 644 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-203ENST00000378169 CTAGE1Q96RT6 745 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 LZTFL1Q9NQ48 299 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 JADE2Q9NQC1 790 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 DIP2CQ9Y2E4 1556 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 TNKSO95271 1327 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 IBSPP21815 317 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-203ENST00000378169 IQCEQ6IPM2 695 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 FAM114A1Q8IWE2 563 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 SYCP3Q8IZU3 236 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 FBXO3Q9UK99 471 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 MYO6Q9UM54 1294 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 INO80Q9ULG1 1556 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-203ENST00000378169 TBCAO75347 108 aaKnown RBP14.97□□□□□ -0.01
NPHP4-203ENST00000378169 VPS36Q86VN1 386 aa14.97□□□□□ -0.01
NPHP4-203ENST00000378169 SPDYE3A6NKU9 549 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 H7C1W4 665 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 CIAO1O76071 339 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 GTF2IP78347 998 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 ARID5AQ03989 594 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 TTC38Q5R3I4 469 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 MFSD14BQ5SR56 506 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 LEKR1Q6ZMV7 388 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 CRACR2AQ9BSW2 395 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 GPR108Q9NPR9 543 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 NOP2P46087 812 aaKnown RBP14.96□□□□□ -0.01
NPHP4-203ENST00000378169 SPAG5Q96R06 1193 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 MED14O60244 1454 aa14.96□□□□□ -0.01
NPHP4-203ENST00000378169 A0A087WWV3 80 aa14.96□□□□□ -0.02
NPHP4-203ENST00000378169 GOLGA6L9A6NEM1 432 aa14.96□□□□□ -0.02
NPHP4-203ENST00000378169 PRKAB2O43741 272 aa14.96□□□□□ -0.02
NPHP4-203ENST00000378169 MTX1Q13505 466 aa14.96□□□□□ -0.02
NPHP4-203ENST00000378169 SYT10Q6XYQ8 523 aa14.96□□□□□ -0.02
NPHP4-203ENST00000378169 FBXO18Q8NFZ0 1043 aa14.96□□□□□ -0.02
NPHP4-203ENST00000378169 TTLL11Q8NHH1 800 aa14.96□□□□□ -0.02
NPHP4-203ENST00000378169 EYA3Q99504 573 aa14.96□□□□□ -0.02
NPHP4-203ENST00000378169 CPS1P31327 1500 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 PAFAH1B1P43034 410 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 UBE3CQ15386 1083 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 TRMT44Q8IYL2 757 aaKnown RBP14.95□□□□□ -0.02
NPHP4-203ENST00000378169 FANCBQ8NB91 859 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 NEXMIFQ5QGS0 1516 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 CUTAO60888 179 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 ERCC3P19447 782 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 DPP8Q6V1X1 898 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-203ENST00000378169 VPS16Q9H269 839 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 HDAC9Q9UKV0 1011 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 NFE2L3Q9Y4A8 694 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 GOLGA6L10A6NI86 522 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 ZNF75DP51815 510 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 UBXN1Q04323 297 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 ERMNQ8TAM6 284 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 USP31Q70CQ4 1352 aa14.95□□□□□ -0.02
NPHP4-203ENST00000378169 TMCO5BA8MYB1 307 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 TXKP42681 527 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.94□□□□□ -0.02
NPHP4-203ENST00000378169 FANCCQ00597 558 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 ADALQ6DHV7 355 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 NSUN7Q8NE18 718 aaKnown RBP14.94□□□□□ -0.02
NPHP4-203ENST00000378169 PCDHA7Q9UN72 937 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 KIDINS220Q9ULH0 1771 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 ERLIN2O94905 339 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 PFKFB1P16118 471 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 FCHSD1Q86WN1 690 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 CLIC6Q96NY7 704 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 EHMT1Q9H9B1 1298 aa14.94□□□□□ -0.02
NPHP4-203ENST00000378169 CGNQ9P2M7 1197 aaKnown RBP14.94□□□□□ -0.02
NPHP4-203ENST00000378169 PNOCQ13519 176 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 ZYXQ15942 572 aaKnown RBP14.93□□□□□ -0.02
NPHP4-203ENST00000378169 MSL1Q68DK7 614 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms