RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 CDKL5O76039 1030 aa22.37■■□□□ 1.17
PCDHA4-201ENST00000378125 CASZ1Q86V15 1759 aa22.37■■□□□ 1.17
PCDHA4-201ENST00000378125 STAG1Q8WVM7 1258 aa22.37■■□□□ 1.17
PCDHA4-201ENST00000378125 RTCBQ9Y3I0 505 aaKnown RBP22.37■■□□□ 1.17
PCDHA4-201ENST00000378125 CHD4Q14839 1912 aa22.37■■□□□ 1.17
PCDHA4-201ENST00000378125 MARCKSP29966 332 aaPredicted RBP22.37■■□□□ 1.17
PCDHA4-201ENST00000378125 NDUFA8P51970 172 aa22.37■■□□□ 1.17
PCDHA4-201ENST00000378125 C17orf53Q8N3J3 647 aaPredicted RBP22.37■■□□□ 1.17
PCDHA4-201ENST00000378125 MRPS27Q92552 414 aaKnown RBP22.37■■□□□ 1.17
PCDHA4-201ENST00000378125 SPTLC2O15270 562 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 OFD1O75665 1012 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 LIFRP42702 1097 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 CHAF1AQ13111 956 aaPredicted RBP22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 WTAPQ15007 396 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 SLC10A5Q5PT55 438 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 C11orf57Q6ZUT1 292 aaPredicted RBP22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 BRAPQ7Z569 592 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 ZNF384Q8TF68 577 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 NUP133Q8WUM0 1156 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 GUCY1A2P33402 732 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 ADALQ6DHV7 355 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 KLHL34Q8N239 644 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 FNBP4Q8N3X1 1017 aaPredicted RBP22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 NYXQ9GZU5 481 aa22.36■■□□□ 1.17
PCDHA4-201ENST00000378125 PRDM1O75626 825 aa22.35■■□□□ 1.17
PCDHA4-201ENST00000378125 ANO1Q5XXA6 986 aa22.35■■□□□ 1.17
PCDHA4-201ENST00000378125 RIOK1Q9BRS2 568 aaKnown RBP22.35■■□□□ 1.17
PCDHA4-201ENST00000378125 POLR3EQ9NVU0 708 aa22.35■■□□□ 1.17
PCDHA4-201ENST00000378125 BTAF1O14981 1849 aa22.35■■□□□ 1.17
PCDHA4-201ENST00000378125 EVX2Q03828 476 aa22.35■■□□□ 1.17
PCDHA4-201ENST00000378125 TPTE2Q6XPS3 522 aa22.35■■□□□ 1.17
PCDHA4-201ENST00000378125 ERICH2A1L162 156 aa22.34■■□□□ 1.17
PCDHA4-201ENST00000378125 SSRP1Q08945 709 aaKnown RBP22.34■■□□□ 1.17
PCDHA4-201ENST00000378125 TXNRD3Q86VQ6 643 aa22.34■■□□□ 1.17
PCDHA4-201ENST00000378125 SART3Q15020 963 aaKnown RBP22.34■■□□□ 1.17
PCDHA4-201ENST00000378125 RC3H1Q5TC82 1133 aaKnown RBP22.34■■□□□ 1.17
PCDHA4-201ENST00000378125 FMR1NBQ8N0W7 255 aaPredicted RBP22.34■■□□□ 1.17
PCDHA4-201ENST00000378125 KCNG4Q8TDN1 519 aa22.34■■□□□ 1.17
PCDHA4-201ENST00000378125 SDF4Q9BRK5 362 aa22.34■■□□□ 1.17
PCDHA4-201ENST00000378125 R3HCC1Q9Y3T6 440 aaKnown RBP22.34■■□□□ 1.17
PCDHA4-201ENST00000378125 A0A1B0GUL6 1792 aa22.33■■□□□ 1.17
PCDHA4-201ENST00000378125 TRIM29Q14134 588 aa22.33■■□□□ 1.17
PCDHA4-201ENST00000378125 YEATS4O95619 227 aa22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 KIAA2012Q0VF49 1180 aa22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 UBAC1Q9BSL1 405 aa22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 TRIM5Q9C035 493 aa22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 SCN7AQ01118 1682 aa22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 EP400Q96L91 3159 aa22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 WDHD1O75717 1129 aaPredicted RBP22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 RTN1Q16799 776 aa22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 SLC4A8Q2Y0W8 1093 aa22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 FBXO33Q7Z6M2 555 aa22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 AATFQ9NY61 560 aaKnown RBP eCLIP22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 KCNJ14Q9UNX9 436 aa22.32■■□□□ 1.16
PCDHA4-201ENST00000378125 CTAGE5O15320 804 aa22.31■■□□□ 1.16
PCDHA4-201ENST00000378125 HIBADHP31937 336 aaKnown RBP22.31■■□□□ 1.16
PCDHA4-201ENST00000378125 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.31■■□□□ 1.16
PCDHA4-201ENST00000378125 RNF41Q9H4P4 317 aaPredicted RBP22.31■■□□□ 1.16
PCDHA4-201ENST00000378125 TIAM2Q8IVF5 1701 aa22.31■■□□□ 1.16
PCDHA4-201ENST00000378125 PRDX5P30044 214 aa22.31■■□□□ 1.16
PCDHA4-201ENST00000378125 RFC4P35249 363 aa22.31■■□□□ 1.16
PCDHA4-201ENST00000378125 MECOMQ03112 1051 aa22.31■■□□□ 1.16
PCDHA4-201ENST00000378125 DRC7Q8IY82 874 aa22.31■■□□□ 1.16
PCDHA4-201ENST00000378125 TNKSO95271 1327 aa22.31■■□□□ 1.16
PCDHA4-201ENST00000378125 FMNL1O95466 1100 aaPredicted RBP22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 STX1AQ16623 288 aa22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 MEX3CQ5U5Q3 659 aaKnown RBP22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 ECM29Q5VYK3 1845 aa22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 CACNA1SQ13698 1873 aa22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 ZNF831Q5JPB2 1677 aa22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 BAZ2AQ9UIF9 1905 aaKnown RBP22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 A0A1W2PQ27 194 aa22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 A0A1W2PQ64 194 aa22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 A0A1W2PQD8 194 aa22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 ZNF654Q8IZM8 581 aa22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 TDRD7Q8NHU6 1098 aaKnown RBP22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 NSUN4Q96CB9 384 aaKnown RBP22.3■■□□□ 1.16
PCDHA4-201ENST00000378125 TM4SF1P30408 202 aa22.29■■□□□ 1.16
PCDHA4-201ENST00000378125 AXDND1Q5T1B0 1012 aaPredicted RBP22.29■■□□□ 1.16
PCDHA4-201ENST00000378125 FAM196AQ6ZSG2 479 aa22.29■■□□□ 1.16
PCDHA4-201ENST00000378125 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.29■■□□□ 1.16
PCDHA4-201ENST00000378125 KCNF1Q9H3M0 494 aa22.29■■□□□ 1.16
PCDHA4-201ENST00000378125 MROH7-TTC4A0A0A0MT08 1334 aa22.29■■□□□ 1.16
PCDHA4-201ENST00000378125 BTBD18B2RXH4 712 aa22.29■■□□□ 1.16
PCDHA4-201ENST00000378125 IFNAR1P17181 557 aa22.29■■□□□ 1.16
PCDHA4-201ENST00000378125 ESR2Q92731 530 aa22.29■■□□□ 1.16
PCDHA4-201ENST00000378125 NRBP1Q9UHY1 535 aa22.29■■□□□ 1.16
PCDHA4-201ENST00000378125 hCG_1642624A0A1W2PR95 340 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 USP17L12C9JPN9 530 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 USP17L21D6R901 530 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 PFKFB1P16118 471 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 SLC39A14Q15043 492 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 IQCB1Q15051 598 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 TRAPPC3LQ5T215 181 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 FANCBQ8NB91 859 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 CLIC6Q96NY7 704 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 GOLGA6L19H0YKK7 550 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 BIN1O00499 593 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 PTGS1P23219 599 aa22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 CTR9Q6PD62 1173 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms