RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 NSUN4Q96CB9 384 aaKnown RBP22.01■■□□□ 1.11
COMMD6-202ENST00000377612 IRF6O14896 467 aa22■■□□□ 1.11
COMMD6-202ENST00000377612 GORABQ5T7V8 394 aa22■■□□□ 1.11
COMMD6-202ENST00000377612 ERO1BQ86YB8 467 aa22■■□□□ 1.11
COMMD6-202ENST00000377612 HOOK2Q96ED9 719 aa22■■□□□ 1.11
COMMD6-202ENST00000377612 DBNLQ9UJU6 430 aaKnown RBP22■■□□□ 1.11
COMMD6-202ENST00000377612 COL2A1P02458 1487 aaPredicted RBP21.99■■□□□ 1.11
COMMD6-202ENST00000377612 GPR75-ASB3A0A0A6YYF3 556 aa21.99■■□□□ 1.11
COMMD6-202ENST00000377612 DDTLA6NHG4 134 aaPredicted RBP21.99■■□□□ 1.11
COMMD6-202ENST00000377612 ENTPD3O75355 529 aa21.99■■□□□ 1.11
COMMD6-202ENST00000377612 GTF2A2P52657 109 aa21.99■■□□□ 1.11
COMMD6-202ENST00000377612 SOX10P56693 466 aa21.99■■□□□ 1.11
COMMD6-202ENST00000377612 PPIL2Q13356 520 aa21.99■■□□□ 1.11
COMMD6-202ENST00000377612 OS9Q13438 667 aaPredicted RBP21.99■■□□□ 1.11
COMMD6-202ENST00000377612 SPTY2D1Q68D10 685 aaPredicted RBP21.99■■□□□ 1.11
COMMD6-202ENST00000377612 SNRKQ9NRH2 765 aa21.99■■□□□ 1.11
COMMD6-202ENST00000377612 BRCA2P51587 3418 aa21.99■■□□□ 1.11
COMMD6-202ENST00000377612 PDE4DIPQ5VU43 2346 aa21.98■■□□□ 1.11
COMMD6-202ENST00000377612 UQCRFS1P1P0C7P4 283 aa21.98■■□□□ 1.11
COMMD6-202ENST00000377612 PICALMQ13492 652 aa21.98■■□□□ 1.11
COMMD6-202ENST00000377612 NOL9Q5SY16 702 aaKnown RBP21.98■■□□□ 1.11
COMMD6-202ENST00000377612 CD99L2Q8TCZ2 262 aa21.98■■□□□ 1.11
COMMD6-202ENST00000377612 PHF20L1A8MW92 1017 aa21.97■■□□□ 1.11
COMMD6-202ENST00000377612 MYH8P13535 1937 aa21.97■■□□□ 1.11
COMMD6-202ENST00000377612 DOCK3Q8IZD9 2030 aa21.96■■□□□ 1.11
COMMD6-202ENST00000377612 BTBD19C9JJ37 291 aa21.96■■□□□ 1.11
COMMD6-202ENST00000377612 TAF1CQ15572 869 aaPredicted RBP21.96■■□□□ 1.11
COMMD6-202ENST00000377612 PKN2Q16513 984 aaKnown RBP21.96■■□□□ 1.11
COMMD6-202ENST00000377612 OTUD7BQ6GQQ9 843 aa21.96■■□□□ 1.11
COMMD6-202ENST00000377612 FBXO46Q6PJ61 603 aaPredicted RBP21.96■■□□□ 1.11
COMMD6-202ENST00000377612 OTOP1Q7RTM1 612 aa21.96■■□□□ 1.11
COMMD6-202ENST00000377612 SLF2Q8IX21 1173 aa21.96■■□□□ 1.11
COMMD6-202ENST00000377612 EAF2Q96CJ1 260 aaPredicted RBP21.96■■□□□ 1.11
COMMD6-202ENST00000377612 RAI14Q9P0K7 980 aa21.96■■□□□ 1.11
COMMD6-202ENST00000377612 EXOC6BQ9Y2D4 811 aa21.96■■□□□ 1.11
COMMD6-202ENST00000377612 KIAA0100Q14667 2235 aaKnown RBP21.95■■□□□ 1.1
COMMD6-202ENST00000377612 CYP2E1P05181 493 aaPredicted RBP21.95■■□□□ 1.1
COMMD6-202ENST00000377612 PPATQ06203 517 aa21.95■■□□□ 1.1
COMMD6-202ENST00000377612 MOGSQ13724 837 aa21.95■■□□□ 1.1
COMMD6-202ENST00000377612 TTC39AQ5SRH9 613 aa21.95■■□□□ 1.1
COMMD6-202ENST00000377612 ADGRA1Q86SQ6 560 aa21.95■■□□□ 1.1
COMMD6-202ENST00000377612 CCDC8Q9H0W5 538 aaPredicted RBP21.95■■□□□ 1.1
COMMD6-202ENST00000377612 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.95■■□□□ 1.1
COMMD6-202ENST00000377612 KCNH4Q9UQ05 1017 aa21.95■■□□□ 1.1
COMMD6-202ENST00000377612 SNAPC2Q13487 334 aa21.94■■□□□ 1.1
COMMD6-202ENST00000377612 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.94■■□□□ 1.1
COMMD6-202ENST00000377612 PIH1D3Q9NQM4 214 aaKnown RBP21.94■■□□□ 1.1
COMMD6-202ENST00000377612 COG6Q9Y2V7 657 aa21.94■■□□□ 1.1
COMMD6-202ENST00000377612 TRIM17Q9Y577 477 aa21.94■■□□□ 1.1
COMMD6-202ENST00000377612 FAM196BA6NMK8 535 aa21.93■■□□□ 1.1
COMMD6-202ENST00000377612 CETPP11597 493 aa21.93■■□□□ 1.1
COMMD6-202ENST00000377612 ZAP70P43403 619 aa21.93■■□□□ 1.1
COMMD6-202ENST00000377612 MAP3K10Q02779 954 aa21.93■■□□□ 1.1
COMMD6-202ENST00000377612 ZNF512BQ96KM6 892 aaPredicted RBP21.93■■□□□ 1.1
COMMD6-202ENST00000377612 NDUFB9Q9Y6M9 179 aa21.93■■□□□ 1.1
COMMD6-202ENST00000377612 BAZ2AQ9UIF9 1905 aaKnown RBP21.92■■□□□ 1.1
COMMD6-202ENST00000377612 ADGRA2Q96PE1 1338 aa21.92■■□□□ 1.1
COMMD6-202ENST00000377612 MLLT1Q03111 559 aaPredicted RBP21.92■■□□□ 1.1
COMMD6-202ENST00000377612 ZSCAN29Q8IWY8 852 aaPredicted RBP21.92■■□□□ 1.1
COMMD6-202ENST00000377612 SIRT2Q8IXJ6 389 aa21.92■■□□□ 1.1
COMMD6-202ENST00000377612 SH3RF3Q8TEJ3 882 aaPredicted RBP21.92■■□□□ 1.1
COMMD6-202ENST00000377612 ERO1AQ96HE7 468 aa21.92■■□□□ 1.1
COMMD6-202ENST00000377612 RCAN3Q9UKA8 241 aa21.92■■□□□ 1.1
COMMD6-202ENST00000377612 NPM3O75607 178 aaKnown RBP21.91■■□□□ 1.1
COMMD6-202ENST00000377612 GSTO1P78417 241 aa21.91■■□□□ 1.1
COMMD6-202ENST00000377612 SP3Q02447 781 aa21.91■■□□□ 1.1
COMMD6-202ENST00000377612 CCDC158Q5M9N0 1113 aa21.91■■□□□ 1.1
COMMD6-202ENST00000377612 C20orf194Q5TEA3 1177 aa21.91■■□□□ 1.1
COMMD6-202ENST00000377612 SCYL3Q8IZE3 742 aa21.91■■□□□ 1.1
COMMD6-202ENST00000377612 OSBPL5Q9H0X9 879 aaPredicted RBP21.91■■□□□ 1.1
COMMD6-202ENST00000377612 LRP2BPQ9P2M1 347 aa21.91■■□□□ 1.1
COMMD6-202ENST00000377612 LDHCP07864 332 aa21.9■■□□□ 1.1
COMMD6-202ENST00000377612 CCDC84Q86UT8 332 aaPredicted RBP21.9■■□□□ 1.1
COMMD6-202ENST00000377612 ZFYVE28Q9HCC9 887 aa21.9■■□□□ 1.1
COMMD6-202ENST00000377612 ZCCHC17Q9NP64 241 aaKnown RBP21.9■■□□□ 1.1
COMMD6-202ENST00000377612 ZBTB40Q9NUA8 1239 aa21.9■■□□□ 1.1
COMMD6-202ENST00000377612 NAA16Q6N069 864 aaPredicted RBP21.89■■□□□ 1.09
COMMD6-202ENST00000377612 TEX11Q8IYF3 940 aa21.89■■□□□ 1.09
COMMD6-202ENST00000377612 ARHGAP39Q9C0H5 1083 aa21.89■■□□□ 1.09
COMMD6-202ENST00000377612 IL1RAPL2Q9NP60 686 aa21.89■■□□□ 1.09
COMMD6-202ENST00000377612 AATFQ9NY61 560 aaKnown RBP eCLIP21.89■■□□□ 1.09
COMMD6-202ENST00000377612 TLR2O60603 784 aa21.88■■□□□ 1.09
COMMD6-202ENST00000377612 PTPRAP18433 802 aa21.88■■□□□ 1.09
COMMD6-202ENST00000377612 RRP1BQ14684 758 aaKnown RBP21.88■■□□□ 1.09
COMMD6-202ENST00000377612 AACSQ86V21 672 aa21.88■■□□□ 1.09
COMMD6-202ENST00000377612 ANTXR1Q9H6X2 564 aa21.88■■□□□ 1.09
COMMD6-202ENST00000377612 DDX19BQ9UMR2 479 aa21.88■■□□□ 1.09
COMMD6-202ENST00000377612 PTPN22Q9Y2R2 807 aa21.88■■□□□ 1.09
COMMD6-202ENST00000377612 MKI67P46013 3256 aaKnown RBP21.88■■□□□ 1.09
COMMD6-202ENST00000377612 GPAT2Q6NUI2 795 aa21.87■■□□□ 1.09
COMMD6-202ENST00000377612 ANKRD23Q86SG2 305 aa21.87■■□□□ 1.09
COMMD6-202ENST00000377612 RHPN1Q8TCX5 695 aa21.87■■□□□ 1.09
COMMD6-202ENST00000377612 EFCC1Q9HA90 598 aa21.87■■□□□ 1.09
COMMD6-202ENST00000377612 PLXNB2O15031 1838 aa21.86■■□□□ 1.09
COMMD6-202ENST00000377612 MAP4K4O95819 1239 aaPredicted RBP21.86■■□□□ 1.09
COMMD6-202ENST00000377612 MS4A1P11836 297 aa21.86■■□□□ 1.09
COMMD6-202ENST00000377612 CTGFP29279 349 aa21.86■■□□□ 1.09
COMMD6-202ENST00000377612 ERC1Q8IUD2 1116 aa21.86■■□□□ 1.09
COMMD6-202ENST00000377612 AFG3L2Q9Y4W6 797 aa21.86■■□□□ 1.09
COMMD6-202ENST00000377612 FLT1P17948 1338 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms