RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 OTUD7BQ6GQQ9 843 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 TRIM5Q9C035 493 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 PDCL3Q9H2J4 239 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 MYCLP12524 364 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 PDIA4P13667 645 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 GSPT1P15170 499 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 MECOMQ03112 1051 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 CT47A1Q5JQC4 288 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 ISM2Q6H9L7 571 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 PPP4R3AQ6IN85 833 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 PODNQ7Z5L7 613 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 PHKBQ93100 1093 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 KIF13AQ9H1H9 1805 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 BACH1O14867 736 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 ICA1Q05084 483 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 TRIM28Q13263 835 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 SUPT20HL1Q3ZLR7 823 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 RUFY3Q7L099 469 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 CERS3Q8IU89 383 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 ZNF34Q8IZ26 560 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 PRM3Q9NNZ6 103 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 GINS2Q9Y248 185 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 ADCY9O60503 1353 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 TRIM75PA6NK02 468 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 MCAMP43121 646 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 ANAPC15P60006 121 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 C8orf34Q49A92 452 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 MTFR1LQ9H019 292 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 BIN1O00499 593 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 JAKMIP3Q5VZ66 844 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 CCDC125Q86Z20 511 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 CCAR2Q8N163 923 aaKnown RBP9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 SCAND2PQ9GZW5 306 aaPredicted RBP9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 PIH1D3Q9NQM4 214 aaKnown RBP9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 SEMA3EO15041 775 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 FLOT1O75955 427 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 ABCB5Q2M3G0 1257 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 DYNLL2Q96FJ2 89 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 NAP1L5Q96NT1 182 aaPredicted RBP9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 PUS7LQ9H0K6 701 aaKnown RBP9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 ARPP21Q9UBL0 812 aaPredicted RBP9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 CCDC39Q9UFE4 941 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 SERPINB13Q9UIV8 391 aa9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 FRMPD2Q68DX3 1309 aaPredicted RBP9.73□□□□□ -0.85
CRNKL1-202ENST00000377340 PRAMEF18Q5VWM3 479 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 LCORLQ8N3X6 602 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 RTL9Q8NET4 1388 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 E7EWF7 191 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 ALAS1P13196 640 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 LETM2Q2VYF4 491 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 FSIP1Q8NA03 581 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 PLIN2Q99541 437 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 MXD3Q9BW11 206 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 NUP62CLQ9H1M0 184 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 SNX14Q9Y5W7 946 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 SP8Q8IXZ3 490 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 COL5A2P05997 1499 aaPredicted RBP9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 DEPDC5O75140 1603 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 ZBED4O75132 1171 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 SERPINC1P01008 464 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 MCM7P33993 719 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 PDIA6Q15084 440 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 UBE3CQ15386 1083 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 TBC1D16Q8TBP0 767 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 OSBP2Q969R2 916 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 CALML4Q96GE6 196 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 CNTNAP4Q9C0A0 1308 aa9.72□□□□□ -0.85
CRNKL1-202ENST00000377340 GNA11P29992 359 aa9.71□□□□□ -0.85
CRNKL1-202ENST00000377340 MRPL12P52815 198 aaKnown RBP9.71□□□□□ -0.85
CRNKL1-202ENST00000377340 SLC10A4Q96EP9 437 aa9.71□□□□□ -0.85
CRNKL1-202ENST00000377340 TMEM87BQ96K49 555 aa9.71□□□□□ -0.85
CRNKL1-202ENST00000377340 GPR108Q9NPR9 543 aa9.71□□□□□ -0.85
CRNKL1-202ENST00000377340 B4DLN1 442 aa9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 CRKP46108 304 aa9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 FOXO4P98177 505 aa9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 GSE1Q14687 1217 aa9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 KRT26Q7Z3Y9 468 aa9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 CNNM3Q8NE01 707 aa9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 FAM84BQ96KN1 310 aaPredicted RBP9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 IQGAP1P46940 1657 aa9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 NRKQ7Z2Y5 1582 aa9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 RPS6KB1P23443 525 aa9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 CNGA1P29973 690 aa9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 ZNF589Q86UQ0 364 aaPredicted RBP9.71□□□□□ -0.86
CRNKL1-202ENST00000377340 CHMP2AO43633 222 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 GRIN3BO60391 1043 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 NTSR2O95665 410 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 CALML3P27482 149 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 PNMA1Q8ND90 353 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 LRRC4BQ9NT99 713 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 REREQ9P2R6 1566 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 TMEM232C9JQI7 657 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 FILIP1LQ4L180 1135 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 TMEM87AQ8NBN3 555 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 CNOT7Q9UIV1 285 aaKnown RBP9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 SORBS3O60504 671 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 TNKSO95271 1327 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 AFMP43652 599 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 TCHPQ9BT92 498 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms