RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 GPATCH3Q96I76 525 aa26.89■■□□□ 1.9
SRM-201ENST00000376957 DCTPP1Q9H773 170 aa26.89■■□□□ 1.9
SRM-201ENST00000376957 MAST2Q6P0Q8 1798 aa26.89■■□□□ 1.89
SRM-201ENST00000376957 WDHD1O75717 1129 aaPredicted RBP26.88■■□□□ 1.89
SRM-201ENST00000376957 ZNF384Q8TF68 577 aa26.88■■□□□ 1.89
SRM-201ENST00000376957 PIH1D3Q9NQM4 214 aaKnown RBP26.88■■□□□ 1.89
SRM-201ENST00000376957 AATFQ9NY61 560 aaKnown RBP eCLIP26.88■■□□□ 1.89
SRM-201ENST00000376957 CYP7A1P22680 504 aa26.87■■□□□ 1.89
SRM-201ENST00000376957 RHBDL3P58872 404 aa26.87■■□□□ 1.89
SRM-201ENST00000376957 ERO1BQ86YB8 467 aa26.87■■□□□ 1.89
SRM-201ENST00000376957 GTF2A2P52657 109 aa26.86■■□□□ 1.89
SRM-201ENST00000376957 PPP4CP60510 307 aa26.86■■□□□ 1.89
SRM-201ENST00000376957 MAGEB6Q8N7X4 407 aa26.85■■□□□ 1.89
SRM-201ENST00000376957 CRBNQ96SW2 442 aa26.85■■□□□ 1.89
SRM-201ENST00000376957 DNAJC2Q99543 621 aaKnown RBP26.85■■□□□ 1.89
SRM-201ENST00000376957 ATP5JP18859 108 aa26.84■■□□□ 1.89
SRM-201ENST00000376957 ZFPM1Q8IX07 1006 aa26.84■■□□□ 1.89
SRM-201ENST00000376957 ZKSCAN4Q969J2 545 aaPredicted RBP26.84■■□□□ 1.89
SRM-201ENST00000376957 OTUD5Q96G74 571 aa26.84■■□□□ 1.89
SRM-201ENST00000376957 DHX36Q9H2U1 1008 aaKnown RBP26.84■■□□□ 1.89
SRM-201ENST00000376957 OTOFQ9HC10 1997 aa26.84■■□□□ 1.89
SRM-201ENST00000376957 RFX7Q2KHR2 1363 aa26.84■■□□□ 1.89
SRM-201ENST00000376957 SPDYE5A6NIY4 337 aa26.83■■□□□ 1.89
SRM-201ENST00000376957 IFNL1Q8IU54 200 aa26.83■■□□□ 1.89
SRM-201ENST00000376957 SH3RF3Q8TEJ3 882 aaPredicted RBP26.83■■□□□ 1.89
SRM-201ENST00000376957 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.83■■□□□ 1.89
SRM-201ENST00000376957 OSBPL5Q9H0X9 879 aaPredicted RBP26.83■■□□□ 1.89
SRM-201ENST00000376957 DDX4Q9NQI0 724 aaKnown RBP26.83■■□□□ 1.89
SRM-201ENST00000376957 ZNF112Q9UJU3 913 aa26.83■■□□□ 1.89
SRM-201ENST00000376957 GOLIM4O00461 696 aa26.82■■□□□ 1.88
SRM-201ENST00000376957 PPATQ06203 517 aa26.82■■□□□ 1.88
SRM-201ENST00000376957 IFFO2Q5TF58 517 aa26.82■■□□□ 1.88
SRM-201ENST00000376957 TRIM34Q9BYJ4 488 aa26.82■■□□□ 1.88
SRM-201ENST00000376957 PICK1Q9NRD5 415 aa26.82■■□□□ 1.88
SRM-201ENST00000376957 SNCAIPQ9Y6H5 919 aa26.82■■□□□ 1.88
SRM-201ENST00000376957 NDUFB9Q9Y6M9 179 aa26.82■■□□□ 1.88
SRM-201ENST00000376957 ATRNL1Q5VV63 1379 aa26.82■■□□□ 1.88
SRM-201ENST00000376957 DOCK2Q92608 1830 aa26.81■■□□□ 1.88
SRM-201ENST00000376957 DDTLA6NHG4 134 aaPredicted RBP26.81■■□□□ 1.88
SRM-201ENST00000376957 SLC9C2Q5TAH2 1124 aa26.81■■□□□ 1.88
SRM-201ENST00000376957 BOLA2Q9H3K6 86 aa26.81■■□□□ 1.88
SRM-201ENST00000376957 ANTXR1Q9H6X2 564 aa26.81■■□□□ 1.88
SRM-201ENST00000376957 PAG1Q9NWQ8 432 aa26.81■■□□□ 1.88
SRM-201ENST00000376957 PCDHB15Q9Y5E8 787 aa26.81■■□□□ 1.88
SRM-201ENST00000376957 COL2A1P02458 1487 aaPredicted RBP26.81■■□□□ 1.88
SRM-201ENST00000376957 TBC1D12O60347 775 aa26.8■■□□□ 1.88
SRM-201ENST00000376957 CETPP11597 493 aa26.8■■□□□ 1.88
SRM-201ENST00000376957 INPP5BP32019 993 aa26.8■■□□□ 1.88
SRM-201ENST00000376957 SNAPC2Q13487 334 aa26.8■■□□□ 1.88
SRM-201ENST00000376957 NOL9Q5SY16 702 aaKnown RBP26.8■■□□□ 1.88
SRM-201ENST00000376957 TGFBRAP1Q8WUH2 860 aa26.8■■□□□ 1.88
SRM-201ENST00000376957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.8■■□□□ 1.88
SRM-201ENST00000376957 ECHDC1Q9NTX5 307 aa26.8■■□□□ 1.88
SRM-201ENST00000376957 SMARCA5O60264 1052 aaPredicted RBP26.79■■□□□ 1.88
SRM-201ENST00000376957 TBC1D8O95759 1140 aa26.79■■□□□ 1.88
SRM-201ENST00000376957 USP5P45974 858 aa26.79■■□□□ 1.88
SRM-201ENST00000376957 MAP3K10Q02779 954 aa26.79■■□□□ 1.88
SRM-201ENST00000376957 PPIL2Q13356 520 aa26.79■■□□□ 1.88
SRM-201ENST00000376957 ZSCAN25Q6NSZ9 544 aa26.79■■□□□ 1.88
SRM-201ENST00000376957 HAUS7Q99871 368 aa26.79■■□□□ 1.88
SRM-201ENST00000376957 CFHR5Q9BXR6 569 aa26.79■■□□□ 1.88
SRM-201ENST00000376957 PI4KBQ9UBF8 816 aa26.79■■□□□ 1.88
SRM-201ENST00000376957 HERC5Q9UII4 1024 aaKnown RBP26.79■■□□□ 1.88
SRM-201ENST00000376957 MYO5AQ9Y4I1 1855 aaKnown RBP26.79■■□□□ 1.88
SRM-201ENST00000376957 CCL15-CCL14A0A0B4J2E2 113 aa26.78■■□□□ 1.88
SRM-201ENST00000376957 TESPA1A2RU30 521 aaPredicted RBP26.78■■□□□ 1.88
SRM-201ENST00000376957 CTNND1O60716 968 aaKnown RBP26.78■■□□□ 1.88
SRM-201ENST00000376957 HLA-DOAP06340 250 aa26.78■■□□□ 1.88
SRM-201ENST00000376957 GJA5P36382 358 aa26.78■■□□□ 1.88
SRM-201ENST00000376957 CCL15Q16663 113 aa26.78■■□□□ 1.88
SRM-201ENST00000376957 NOM1Q5C9Z4 860 aaKnown RBP26.78■■□□□ 1.88
SRM-201ENST00000376957 SH3BP5LQ7L8J4 393 aa26.78■■□□□ 1.88
SRM-201ENST00000376957 ADGRA1Q86SQ6 560 aa26.78■■□□□ 1.88
SRM-201ENST00000376957 SCYL3Q8IZE3 742 aa26.77■■□□□ 1.88
SRM-201ENST00000376957 MIGA1Q8NAN2 632 aa26.77■■□□□ 1.88
SRM-201ENST00000376957 GCC1Q96CN9 775 aa26.77■■□□□ 1.88
SRM-201ENST00000376957 LAMB1P07942 1786 aa26.76■■□□□ 1.88
SRM-201ENST00000376957 MAGEB6P1A0A0J9YX57 407 aa26.76■■□□□ 1.87
SRM-201ENST00000376957 FOXP4Q8IVH2 680 aaPredicted RBP26.76■■□□□ 1.87
SRM-201ENST00000376957 MAPKAPK5Q8IW41 473 aa26.76■■□□□ 1.87
SRM-201ENST00000376957 CNKSR2Q8WXI2 1034 aa26.76■■□□□ 1.87
SRM-201ENST00000376957 MS4A4AQ96JQ5 239 aa26.76■■□□□ 1.87
SRM-201ENST00000376957 FLT1P17948 1338 aa26.75■■□□□ 1.87
SRM-201ENST00000376957 IRF6O14896 467 aa26.75■■□□□ 1.87
SRM-201ENST00000376957 PDE6AP16499 860 aa26.75■■□□□ 1.87
SRM-201ENST00000376957 CRACR2BQ8N4Y2 399 aaPredicted RBP26.75■■□□□ 1.87
SRM-201ENST00000376957 CASP8AP2Q9UKL3 1982 aa26.75■■□□□ 1.87
SRM-201ENST00000376957 PHF20L1A8MW92 1017 aa26.74■■□□□ 1.87
SRM-201ENST00000376957 GPR25O00155 361 aa26.74■■□□□ 1.87
SRM-201ENST00000376957 ERC2O15083 957 aa26.74■■□□□ 1.87
SRM-201ENST00000376957 LRRFIP1Q32MZ4 808 aaKnown RBP26.74■■□□□ 1.87
SRM-201ENST00000376957 RWDD1Q9H446 243 aaPredicted RBP26.74■■□□□ 1.87
SRM-201ENST00000376957 ZCCHC17Q9NP64 241 aaKnown RBP26.74■■□□□ 1.87
SRM-201ENST00000376957 IGF2BP3O00425 579 aaKnown RBP eCLIP26.73■■□□□ 1.874e-6■■■■□ 19.3
SRM-201ENST00000376957 DYNLL1P63167 89 aaKnown RBP26.73■■□□□ 1.87
SRM-201ENST00000376957 HDAC1Q13547 482 aaPredicted RBP26.73■■□□□ 1.87
SRM-201ENST00000376957 CRNKL1Q9BZJ0 848 aaKnown RBP26.73■■□□□ 1.87
SRM-201ENST00000376957 TTC41PQ6P2S7 1318 aa26.72■■□□□ 1.87
SRM-201ENST00000376957 ZNF532Q9HCE3 1301 aa26.72■■□□□ 1.87
SRM-201ENST00000376957 TTC6Q86TZ1 520 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms