RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 LRRC2Q9BYS8 371 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 TMX1Q9H3N1 280 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 RREB1Q92766 1687 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 SH3TC1Q8TE82 1336 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 NTSR2O95665 410 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 MCAMP43121 646 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 GPS2Q13227 327 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 LRRFIP1Q32MZ4 808 aaKnown RBP14.89□□□□□ -0.03
MSH5-204ENST00000375755 NEK1Q96PY6 1258 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 SRRTQ9BXP5 876 aaKnown RBP14.89□□□□□ -0.03
MSH5-204ENST00000375755 ATRNO75882 1429 aa14.88□□□□□ -0.03
MSH5-204ENST00000375755 OSBP2Q969R2 916 aa14.88□□□□□ -0.03
MSH5-204ENST00000375755 BTAF1O14981 1849 aa14.88□□□□□ -0.03
MSH5-204ENST00000375755 A0A1B0GVL5 298 aa14.88□□□□□ -0.03
MSH5-204ENST00000375755 NRDCO43847 1150 aa14.88□□□□□ -0.03
MSH5-204ENST00000375755 CYP21A2P08686 494 aa14.88□□□□□ -0.03
MSH5-204ENST00000375755 NAA16Q6N069 864 aaPredicted RBP14.88□□□□□ -0.03
MSH5-204ENST00000375755 MAST3O60307 1309 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 AKAP11Q9UKA4 1901 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 PHKA1P46020 1223 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 ERFEQ4G0M1 354 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 ILDR1Q86SU0 546 aaPredicted RBP14.87□□□□□ -0.03
MSH5-204ENST00000375755 NSUN7Q8NE18 718 aaKnown RBP14.87□□□□□ -0.03
MSH5-204ENST00000375755 EFCC1Q9HA90 598 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 BIN1O00499 593 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 PPFIA3O75145 1194 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 CTDNEP1O95476 244 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 NCAPHQ15003 741 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 TTLL5Q6EMB2 1281 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 STOX1Q6ZVD7 989 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 MRPS27Q92552 414 aaKnown RBP14.87□□□□□ -0.03
MSH5-204ENST00000375755 SMARCC1Q92922 1105 aaPredicted RBP14.87□□□□□ -0.03
MSH5-204ENST00000375755 KIAA1468Q9P260 1216 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 PCDHA7Q9UN72 937 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 AKAP2Q9Y2D5 859 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 AFF2P51816 1311 aa14.87□□□□□ -0.03
MSH5-204ENST00000375755 PDE8BO95263 885 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 TPM1P09493 284 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 NOP2P46087 812 aaKnown RBP14.86□□□□□ -0.03
MSH5-204ENST00000375755 GUCY1B3Q02153 619 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 USPL1Q5W0Q7 1092 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 ZNF396Q96N95 335 aaPredicted RBP14.86□□□□□ -0.03
MSH5-204ENST00000375755 BPIFA3Q9BQP9 254 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 NDUFA8P51970 172 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 ZMYM1Q5SVZ6 1142 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 TBC1D9BQ66K14 1250 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 MYH15Q9Y2K3 1946 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 NEDD4P46934 1319 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 RNF113AO15541 343 aaKnown RBP14.86□□□□□ -0.03
MSH5-204ENST00000375755 CCP110O43303 1012 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 GOLGA8FQ08AF8 430 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 GOLGA8DPQ0D2H9 430 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 KRT32Q14532 448 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 SLC51AQ86UW1 340 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 FUT8Q9BYC5 575 aa14.86□□□□□ -0.03
MSH5-204ENST00000375755 PTPDC1A2A3K4 754 aa14.85□□□□□ -0.03
MSH5-204ENST00000375755 ATP1A3P13637 1013 aa14.85□□□□□ -0.03
MSH5-204ENST00000375755 LMOD1P29536 600 aaPredicted RBP14.85□□□□□ -0.03
MSH5-204ENST00000375755 FANCCQ00597 558 aa14.85□□□□□ -0.03
MSH5-204ENST00000375755 FAM177A1Q8N128 213 aaPredicted RBP14.85□□□□□ -0.03
MSH5-204ENST00000375755 FBXO18Q8NFZ0 1043 aa14.85□□□□□ -0.03
MSH5-204ENST00000375755 GJD4Q96KN9 370 aaPredicted RBP14.85□□□□□ -0.03
MSH5-204ENST00000375755 PUS7LQ9H0K6 701 aaKnown RBP14.85□□□□□ -0.03
MSH5-204ENST00000375755 H3BQF6 201 aa14.85□□□□□ -0.03
MSH5-204ENST00000375755 FOXP2O15409 715 aa14.85□□□□□ -0.03
MSH5-204ENST00000375755 PFKFB2O60825 505 aa14.85□□□□□ -0.03
MSH5-204ENST00000375755 LMAN1P49257 510 aa14.85□□□□□ -0.03
MSH5-204ENST00000375755 GOLGA5Q8TBA6 731 aa14.85□□□□□ -0.03
MSH5-204ENST00000375755 ADAM21Q9UKJ8 722 aa14.85□□□□□ -0.03
MSH5-204ENST00000375755 DHX16O60231 1041 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 HSPD1P10809 573 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 CASQ1P31415 396 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 ZRSR1Q15695 479 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 WASHC4Q2M389 1173 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 SRLQ86TD4 932 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 GPR161Q8N6U8 529 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 LLPHQ9BRT6 129 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 LAMA4Q16363 1823 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 VWA3AA6NCI4 1184 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 GNPATO15228 680 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 GNL2Q13823 731 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 DHX8Q14562 1220 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 CCDC102BQ68D86 513 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 CHST3Q7LGC8 479 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 DPF2Q92785 391 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 PARD6BQ9BYG5 372 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 ARFGAP3Q9NP61 516 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 PIH1D3Q9NQM4 214 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 CWC15Q9P013 229 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 ATL3Q6DD88 541 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 SECISBP2LQ93073 1101 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 EXOC4Q96A65 974 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 AK7Q96M32 723 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 HSD3B7Q9H2F3 369 aa14.84□□□□□ -0.03
MSH5-204ENST00000375755 CCNL1Q9UK58 526 aaPredicted RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 RRP15Q9Y3B9 282 aaKnown RBP14.84□□□□□ -0.03
MSH5-204ENST00000375755 BCORQ6W2J9 1755 aa14.83□□□□□ -0.04
MSH5-204ENST00000375755 CASZ1Q86V15 1759 aa14.83□□□□□ -0.04
MSH5-204ENST00000375755 PTPN21Q16825 1174 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms