RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.19
CLCNKA-202ENST00000375692 NCOA7Q8NI08 942 aa16.27■□□□□ 0.19
CLCNKA-202ENST00000375692 TUBE1Q9UJT0 475 aa16.27■□□□□ 0.19
CLCNKA-202ENST00000375692 ARFGEF2Q9Y6D5 1785 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 SEC31AO94979 1220 aaKnown RBP16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 ZAP70P43403 619 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 MYL5Q02045 173 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 FOXP4Q8IVH2 680 aaPredicted RBP16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 PHKBQ93100 1093 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 ALG1Q9BT22 464 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 CEP126Q9P2H0 1117 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 THSD7AQ9UPZ6 1657 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 ZNF213O14771 459 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 LONRF3Q496Y0 759 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 VPS37DQ86XT2 251 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 MNS1Q8NEH6 495 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 XAGE2Q96GT9 111 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 SENP2Q9HC62 589 aa16.26■□□□□ 0.19
CLCNKA-202ENST00000375692 PHLPP2Q6ZVD8 1323 aa16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 UBE2Q2LH0YL09 131 aa16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 CCDC158Q5M9N0 1113 aa16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 HPSEQ9Y251 543 aa16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 FOXN1O15353 648 aa16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 TOP1P11387 765 aaKnown RBP16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 CDC27P30260 824 aa16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 PDE4BQ07343 736 aa16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 SPECC1Q5M775 1068 aa16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 KRT40Q6A162 431 aa16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 VSTM4Q8IW00 320 aa16.25■□□□□ 0.19
CLCNKA-202ENST00000375692 POLR3GO15318 223 aaPredicted RBP16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 GPAA1O43292 621 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 ZRANB2O95218 330 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 PTPAQ15257 358 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 NBPF3Q9H094 633 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 INTS13Q9NVM9 706 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 TADA3O75528 432 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 GPTP24298 496 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 GNL2Q13823 731 aaKnown RBP16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 TMCO3Q6UWJ1 677 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 CYB5R4Q7L1T6 521 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 SYNE4Q8N205 404 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 LINC00116Q8NCU8 138 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 TIGD1Q96MW7 591 aa16.24■□□□□ 0.19
CLCNKA-202ENST00000375692 VWA3AA6NCI4 1184 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 TUBB4AP04350 444 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 BMP6P22004 513 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 PDILTQ8N807 584 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 PCDHA5Q9Y5H7 936 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 CCDC66A2RUB6 948 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 CBFA2T2O43439 604 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 TMEM139Q8IV31 216 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 APPBP2Q92624 585 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 SMARCC1Q92922 1105 aaPredicted RBP16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 WDR24Q96S15 920 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 MAP3K14Q99558 947 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 PPP2R2CQ9Y2T4 447 aa16.23■□□□□ 0.19
CLCNKA-202ENST00000375692 CCP110O43303 1012 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 CIAO1O76071 339 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 TCIRG1Q13488 830 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 DHX8Q14562 1220 aaKnown RBP16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 KIF6Q6ZMV9 814 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 TICAM2Q86XR7 235 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 INCENPQ9NQS7 918 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 METAP2P50579 478 aaKnown RBP eCLIP16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 EIF5P55010 431 aaKnown RBP16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 CCDC57Q2TAC2 916 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 RESP18Q5W5W9 173 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 DZIP3Q86Y13 1208 aaKnown RBP16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 TBC1D10CQ8IV04 446 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 CNNM3Q8NE01 707 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 MYL10Q9BUA6 226 aa16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 ZCCHC17Q9NP64 241 aaKnown RBP16.22■□□□□ 0.19
CLCNKA-202ENST00000375692 MAP3K15Q6ZN16 1313 aa16.21■□□□□ 0.19
CLCNKA-202ENST00000375692 TJP1Q07157 1748 aa16.21■□□□□ 0.19
CLCNKA-202ENST00000375692 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
CLCNKA-202ENST00000375692 CYP2C19P33261 490 aa16.21■□□□□ 0.19
CLCNKA-202ENST00000375692 ADKP55263 362 aaKnown RBP16.21■□□□□ 0.19
CLCNKA-202ENST00000375692 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
CLCNKA-202ENST00000375692 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLCNKA-202ENST00000375692 ARGLU1Q9NWB6 273 aaPredicted RBP16.21■□□□□ 0.19
CLCNKA-202ENST00000375692 PPP6R2O75170 966 aa16.21■□□□□ 0.18
CLCNKA-202ENST00000375692 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.18
CLCNKA-202ENST00000375692 GNG11P61952 73 aa16.21■□□□□ 0.18
CLCNKA-202ENST00000375692 TOGARAM2Q6ZUX3 1019 aa16.21■□□□□ 0.18
CLCNKA-202ENST00000375692 STK11IPQ8N1F8 1099 aa16.21■□□□□ 0.18
CLCNKA-202ENST00000375692 CCDC191Q8NCU4 936 aa16.21■□□□□ 0.18
CLCNKA-202ENST00000375692 KCNH3Q9ULD8 1083 aa16.21■□□□□ 0.18
CLCNKA-202ENST00000375692 ANGEL1Q9UNK9 670 aaKnown RBP16.21■□□□□ 0.18
CLCNKA-202ENST00000375692 ZMYM6O95789 1325 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 SASH3O75995 380 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 APPP05067 770 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 TRDNQ13061 729 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 CCDC102BQ68D86 513 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 GIGYF2Q6Y7W6 1299 aaKnown RBP16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 KRBA2Q6ZNG9 492 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms