RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 E9PSI1 815 aa17.54■□□□□ 0.4
PTCH1-202ENST00000375271 EVI5O60447 810 aa17.54■□□□□ 0.4
PTCH1-202ENST00000375271 ENTPD3O75355 529 aa17.54■□□□□ 0.4
PTCH1-202ENST00000375271 BCRP11274 1271 aa17.54■□□□□ 0.4
PTCH1-202ENST00000375271 CAPN2P17655 700 aa17.54■□□□□ 0.4
PTCH1-202ENST00000375271 PICALMQ13492 652 aa17.54■□□□□ 0.4
PTCH1-202ENST00000375271 SPTY2D1Q68D10 685 aaPredicted RBP17.54■□□□□ 0.4
PTCH1-202ENST00000375271 COA7Q96BR5 231 aa17.54■□□□□ 0.4
PTCH1-202ENST00000375271 FAM198AQ9UFP1 575 aa17.54■□□□□ 0.4
PTCH1-202ENST00000375271 MGAMO43451 1857 aa17.54■□□□□ 0.4
PTCH1-202ENST00000375271 SALL1Q9NSC2 1324 aa17.53■□□□□ 0.4
PTCH1-202ENST00000375271 A0A0G2JLL6 359 aaPredicted RBP17.53■□□□□ 0.4
PTCH1-202ENST00000375271 TRIM75PA6NK02 468 aa17.53■□□□□ 0.4
PTCH1-202ENST00000375271 CIAO1O76071 339 aa17.53■□□□□ 0.4
PTCH1-202ENST00000375271 PRRT2Q7Z6L0 340 aaPredicted RBP17.53■□□□□ 0.4
PTCH1-202ENST00000375271 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
PTCH1-202ENST00000375271 UNC93B1Q9H1C4 597 aa17.53■□□□□ 0.4
PTCH1-202ENST00000375271 SLC45A1Q9Y2W3 748 aa17.53■□□□□ 0.4
PTCH1-202ENST00000375271 SGPL1O95470 568 aa17.52■□□□□ 0.4
PTCH1-202ENST00000375271 INHAP05111 366 aa17.52■□□□□ 0.4
PTCH1-202ENST00000375271 PTPRAP18433 802 aa17.52■□□□□ 0.4
PTCH1-202ENST00000375271 IL15P40933 162 aaPredicted RBP17.52■□□□□ 0.4
PTCH1-202ENST00000375271 FLT3LGP49771 235 aa17.52■□□□□ 0.4
PTCH1-202ENST00000375271 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.4
PTCH1-202ENST00000375271 IDI2Q9BXS1 227 aa17.52■□□□□ 0.4
PTCH1-202ENST00000375271 GABRQQ9UN88 632 aa17.52■□□□□ 0.4
PTCH1-202ENST00000375271 MYH2Q9UKX2 1941 aa17.51■□□□□ 0.39
PTCH1-202ENST00000375271 CTNND1O60716 968 aaKnown RBP17.51■□□□□ 0.39
PTCH1-202ENST00000375271 ELNP15502 786 aa17.51■□□□□ 0.39
PTCH1-202ENST00000375271 PHKA1P46020 1223 aa17.51■□□□□ 0.39
PTCH1-202ENST00000375271 RFX5P48382 616 aaPredicted RBP17.51■□□□□ 0.39
PTCH1-202ENST00000375271 MOGSQ13724 837 aa17.51■□□□□ 0.39
PTCH1-202ENST00000375271 ATG9AQ7Z3C6 839 aa17.51■□□□□ 0.39
PTCH1-202ENST00000375271 PXYLP1Q8TE99 480 aa17.51■□□□□ 0.39
PTCH1-202ENST00000375271 DOCK1Q14185 1865 aa17.5■□□□□ 0.39
PTCH1-202ENST00000375271 BTDP43251 543 aa17.5■□□□□ 0.39
PTCH1-202ENST00000375271 PABPC4Q13310 644 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTCH1-202ENST00000375271 ALDH1L2Q3SY69 923 aa17.5■□□□□ 0.39
PTCH1-202ENST00000375271 ZFPM1Q8IX07 1006 aa17.5■□□□□ 0.39
PTCH1-202ENST00000375271 DEFB118Q96PH6 123 aa17.5■□□□□ 0.39
PTCH1-202ENST00000375271 ZBTB7BO15156 539 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-202ENST00000375271 IRF5Q13568 498 aa17.49■□□□□ 0.39
PTCH1-202ENST00000375271 GORABQ5T7V8 394 aa17.49■□□□□ 0.39
PTCH1-202ENST00000375271 CCDC102BQ68D86 513 aa17.49■□□□□ 0.39
PTCH1-202ENST00000375271 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
PTCH1-202ENST00000375271 ANKRD13CQ8N6S4 541 aa17.49■□□□□ 0.39
PTCH1-202ENST00000375271 NOL10Q9BSC4 688 aaKnown RBP17.49■□□□□ 0.39
PTCH1-202ENST00000375271 AGTPBP1Q9UPW5 1226 aa17.49■□□□□ 0.39
PTCH1-202ENST00000375271 AKAP2Q9Y2D5 859 aa17.49■□□□□ 0.39
PTCH1-202ENST00000375271 AFG3L2Q9Y4W6 797 aa17.49■□□□□ 0.39
PTCH1-202ENST00000375271 A0A1W2PPC1 479 aa17.48■□□□□ 0.39
PTCH1-202ENST00000375271 PHF20L1A8MW92 1017 aa17.48■□□□□ 0.39
PTCH1-202ENST00000375271 GSTO1P78417 241 aa17.48■□□□□ 0.39
PTCH1-202ENST00000375271 MVPQ14764 893 aaKnown RBP17.48■□□□□ 0.39
PTCH1-202ENST00000375271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.48■□□□□ 0.393e-7■■■■■ 56.2
PTCH1-202ENST00000375271 MROH7-TTC4A0A0A0MT08 1334 aa17.47■□□□□ 0.39
PTCH1-202ENST00000375271 GAKO14976 1311 aa17.47■□□□□ 0.39
PTCH1-202ENST00000375271 LDHCP07864 332 aa17.47■□□□□ 0.39
PTCH1-202ENST00000375271 NECAB2Q7Z6G3 386 aa17.47■□□□□ 0.39
PTCH1-202ENST00000375271 UBE2Q1Q7Z7E8 422 aa17.47■□□□□ 0.39
PTCH1-202ENST00000375271 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
PTCH1-202ENST00000375271 ATRNL1Q5VV63 1379 aa17.46■□□□□ 0.39
PTCH1-202ENST00000375271 DDTLA6NHG4 134 aaPredicted RBP17.46■□□□□ 0.39
PTCH1-202ENST00000375271 ADORA1P30542 326 aa17.46■□□□□ 0.39
PTCH1-202ENST00000375271 RASGRF1Q13972 1273 aa17.46■□□□□ 0.39
PTCH1-202ENST00000375271 FAM110CQ1W6H9 321 aa17.46■□□□□ 0.39
PTCH1-202ENST00000375271 PROCA1Q8NCQ7 364 aaPredicted RBP17.46■□□□□ 0.39
PTCH1-202ENST00000375271 SLC17A8Q8NDX2 589 aa17.46■□□□□ 0.39
PTCH1-202ENST00000375271 TBC1D2Q9BYX2 928 aa17.46■□□□□ 0.39
PTCH1-202ENST00000375271 AS3MTQ9HBK9 375 aa17.46■□□□□ 0.39
PTCH1-202ENST00000375271 PA2G4Q9UQ80 394 aaKnown RBP17.46■□□□□ 0.39
PTCH1-202ENST00000375271 PDS5AQ29RF7 1337 aaKnown RBP17.46■□□□□ 0.38
PTCH1-202ENST00000375271 ZNF521Q96K83 1311 aa17.46■□□□□ 0.38
PTCH1-202ENST00000375271 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
PTCH1-202ENST00000375271 GCLCP48506 637 aaPredicted RBP17.45■□□□□ 0.38
PTCH1-202ENST00000375271 NEUROD6Q96NK8 337 aa17.45■□□□□ 0.38
PTCH1-202ENST00000375271 TRIM34Q9BYJ4 488 aa17.45■□□□□ 0.38
PTCH1-202ENST00000375271 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.45■□□□□ 0.38
PTCH1-202ENST00000375271 OSBPL5Q9H0X9 879 aaPredicted RBP17.45■□□□□ 0.38
PTCH1-202ENST00000375271 HMGCRP04035 888 aa17.44■□□□□ 0.38
PTCH1-202ENST00000375271 CCAR1Q8IX12 1150 aaKnown RBP17.44■□□□□ 0.38
PTCH1-202ENST00000375271 FAM163AQ96GL9 167 aaPredicted RBP17.44■□□□□ 0.38
PTCH1-202ENST00000375271 PAWRQ96IZ0 340 aaKnown RBP17.44■□□□□ 0.38
PTCH1-202ENST00000375271 DDX4Q9NQI0 724 aaKnown RBP17.44■□□□□ 0.38
PTCH1-202ENST00000375271 RAI14Q9P0K7 980 aa17.44■□□□□ 0.38
PTCH1-202ENST00000375271 PTPRFP10586 1907 aa17.44■□□□□ 0.38
PTCH1-202ENST00000375271 RFX7Q2KHR2 1363 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 A0A1B0GUL7 405 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 MAP4K4O95819 1239 aaPredicted RBP17.43■□□□□ 0.38
PTCH1-202ENST00000375271 TIMM10P62072 90 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 IRX3P78415 501 aaPredicted RBP17.43■□□□□ 0.38
PTCH1-202ENST00000375271 MECOMQ03112 1051 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 SPP2Q13103 211 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 TREML2Q5T2D2 321 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 SH3BP5LQ7L8J4 393 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 CCDC84Q86UT8 332 aaPredicted RBP17.43■□□□□ 0.38
PTCH1-202ENST00000375271 C7orf61Q8IZ16 206 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 ZNF280CQ8ND82 737 aa17.43■□□□□ 0.38
PTCH1-202ENST00000375271 CWC22Q9HCG8 908 aaKnown RBP17.43■□□□□ 0.38
PTCH1-202ENST00000375271 HMX1Q9NP08 348 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms