RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 FAM221BA6H8Z2 402 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 RHOBTB3O94955 611 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 BPIFB3P59826 476 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
UBR4-201ENST00000375218 TRIM74Q86UV6 250 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 TRIM73Q86UV7 250 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 ARL6IP6Q8N6S5 226 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 SYAP1Q96A49 352 aaPredicted RBP10.44□□□□□ -0.74
UBR4-201ENST00000375218 VIL1P09327 827 aaKnown RBP10.43□□□□□ -0.74
UBR4-201ENST00000375218 GYS1P13807 737 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 TTF1Q15361 905 aaPredicted RBP10.43□□□□□ -0.74
UBR4-201ENST00000375218 BRDTQ58F21 947 aaPredicted RBP10.43□□□□□ -0.74
UBR4-201ENST00000375218 SYNE3Q6ZMZ3 975 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 JMYQ8N9B5 988 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 SCLT1Q96NL6 688 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 KDM3BQ7LBC6 1761 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 WASLO00401 505 aaPredicted RBP10.43□□□□□ -0.74
UBR4-201ENST00000375218 ORC4O43929 436 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 B3GALNT1O75752 331 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 ENPP1P22413 925 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 PRPF4BQ13523 1007 aaKnown RBP10.43□□□□□ -0.74
UBR4-201ENST00000375218 AP1ARQ63HQ0 302 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 C16orf54Q6UWD8 224 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 FAM47EQ6ZV65 393 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBR4-201ENST00000375218 IQCGQ9H095 443 aaKnown RBP10.43□□□□□ -0.74
UBR4-201ENST00000375218 TRIM35Q9UPQ4 493 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 TOGARAM1Q9Y4F4 1720 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 GTPBP10A4D1E9 387 aaKnown RBP10.43□□□□□ -0.74
UBR4-201ENST00000375218 KIAA0754O94854 1291 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 KIF5BP33176 963 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 SESN3P58005 492 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 MRPL28Q13084 256 aaKnown RBP10.43□□□□□ -0.74
UBR4-201ENST00000375218 C21orf62-AS1Q17RA5 79 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 NME9Q86XW9 330 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 OR8H2Q8N162 312 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 POLKQ9UBT6 870 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 NHSL1Q5SYE7 1610 aa10.43□□□□□ -0.74
UBR4-201ENST00000375218 PRIM1P49642 420 aaKnown RBP10.42□□□□□ -0.74
UBR4-201ENST00000375218 NLRP13Q86W25 1043 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 SELENOOQ9BVL4 669 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 SEL1LQ9UBV2 794 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 MST1RQ04912 1400 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 SYNDIG1LA6NDD5 238 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 KIF3CO14782 793 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 DNAJB2P25686 324 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 EAPPQ56P03 285 aaPredicted RBP10.42□□□□□ -0.74
UBR4-201ENST00000375218 DALRD3Q5D0E6 543 aaKnown RBP10.42□□□□□ -0.74
UBR4-201ENST00000375218 SPAG5Q96R06 1193 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 SLKQ9H2G2 1235 aaPredicted RBP10.42□□□□□ -0.74
UBR4-201ENST00000375218 EIF3AQ14152 1382 aaKnown RBP10.42□□□□□ -0.74
UBR4-201ENST00000375218 NCAPD2Q15021 1401 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 C5P01031 1676 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 MYO1BO43795 1136 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 FAAH2Q6GMR7 532 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 GGNBP2Q9H3C7 697 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 ZIM2Q9NZV7 527 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 RASA4BC9J798 803 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 FAM184AQ8NB25 1140 aa10.42□□□□□ -0.74
UBR4-201ENST00000375218 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.42□□□□□ -0.74
UBR4-201ENST00000375218 COL16A1Q07092 1604 aaPredicted RBP10.41□□□□□ -0.74
UBR4-201ENST00000375218 PXDNQ92626 1479 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 SLC4A1P02730 911 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 MMEP08473 750 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
UBR4-201ENST00000375218 TMED1Q13445 227 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 TMEM95Q3KNT9 176 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 ACBD5Q5T8D3 534 aaPredicted RBP10.41□□□□□ -0.74
UBR4-201ENST00000375218 GALNT17Q6IS24 598 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 PDXDC2PQ6P474 469 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 CPLX2Q6PUV4 134 aaKnown RBP10.41□□□□□ -0.74
UBR4-201ENST00000375218 RASSF3Q86WH2 238 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 RASA4O43374 803 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 PRPF3O43395 683 aaKnown RBP10.41□□□□□ -0.74
UBR4-201ENST00000375218 VCAM1P19320 739 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 CASP2P42575 452 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 KIF11P52732 1056 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 FAM83BQ5T0W9 1011 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 FRS2Q8WU20 508 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 USP6NLQ92738 828 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 TIFAQ96CG3 184 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 PGBD4Q96DM1 585 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 KCTD5Q9NXV2 234 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 LTBP4Q8N2S1 1624 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 F8W031 263 aaPredicted RBP10.41□□□□□ -0.74
UBR4-201ENST00000375218 XRCC5P13010 732 aaKnown RBP10.41□□□□□ -0.74
UBR4-201ENST00000375218 UBASH3AP57075 661 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 POLR2FP61218 127 aaKnown RBP10.41□□□□□ -0.74
UBR4-201ENST00000375218 FANCCQ00597 558 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 SFSWAPQ12872 951 aaKnown RBP10.41□□□□□ -0.74
UBR4-201ENST00000375218 UBR7Q8N806 425 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 FAM212AQ96EL1 285 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 PHACTR3Q96KR7 559 aa10.41□□□□□ -0.74
UBR4-201ENST00000375218 CENPFP49454 3210 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 TRIM64A6NGJ6 449 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 TRIM64BA6NI03 449 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 KRT10P13645 584 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 SLC43A3Q8NBI5 491 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 SLC39A3Q9BRY0 314 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 PARP2Q9UGN5 583 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms