RNA–Protein interactions for RNA: ENST00000374270.7

SUSD1-204, Transcript of sushi domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD1, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-204ENST00000374270 ZNF652Q9Y2D9 606 aa23.11■■□□□ 1.29
SUSD1-204ENST00000374270 IQCB1Q15051 598 aa23.11■■□□□ 1.29
SUSD1-204ENST00000374270 TDRD7Q8NHU6 1098 aaKnown RBP23.11■■□□□ 1.29
SUSD1-204ENST00000374270 DIS3L2Q8IYB7 885 aaKnown RBP23.1■■□□□ 1.29
SUSD1-204ENST00000374270 GRAMD1CQ8IYS0 662 aa23.1■■□□□ 1.29
SUSD1-204ENST00000374270 OXER1Q8TDS5 423 aa23.1■■□□□ 1.29
SUSD1-204ENST00000374270 FAM217BQ9NTX9 383 aaPredicted RBP23.1■■□□□ 1.29
SUSD1-204ENST00000374270 PPARAQ07869 468 aa23.1■■□□□ 1.29
SUSD1-204ENST00000374270 PARP10Q53GL7 1025 aa23.1■■□□□ 1.29
SUSD1-204ENST00000374270 VPS54Q9P1Q0 977 aa23.1■■□□□ 1.29
SUSD1-204ENST00000374270 FAM205CA6NFA0 338 aa23.09■■□□□ 1.29
SUSD1-204ENST00000374270 AKAP17AQ02040 695 aaKnown RBP23.09■■□□□ 1.29
SUSD1-204ENST00000374270 ZNF827Q17R98 1081 aa23.09■■□□□ 1.29
SUSD1-204ENST00000374270 TRIM22Q8IYM9 498 aa23.09■■□□□ 1.29
SUSD1-204ENST00000374270 IFNKQ9P0W0 207 aa23.09■■□□□ 1.29
SUSD1-204ENST00000374270 KIAA1468Q9P260 1216 aa23.09■■□□□ 1.29
SUSD1-204ENST00000374270 NUP188Q5SRE5 1749 aa23.08■■□□□ 1.29
SUSD1-204ENST00000374270 GOLGA8FQ08AF8 430 aa23.08■■□□□ 1.29
SUSD1-204ENST00000374270 GOLGA8DPQ0D2H9 430 aa23.08■■□□□ 1.29
SUSD1-204ENST00000374270 SAFBQ15424 915 aaKnown RBP eCLIP23.08■■□□□ 1.29
SUSD1-204ENST00000374270 DHX40Q8IX18 779 aaKnown RBP23.08■■□□□ 1.29
SUSD1-204ENST00000374270 CABP5Q9NP86 173 aa23.08■■□□□ 1.29
SUSD1-204ENST00000374270 CTAGE5O15320 804 aa23.08■■□□□ 1.29
SUSD1-204ENST00000374270 CREBRFQ8IUR6 639 aa23.08■■□□□ 1.29
SUSD1-204ENST00000374270 GNL3LQ9NVN8 582 aaKnown RBP23.08■■□□□ 1.29
SUSD1-204ENST00000374270 USP17L12C9JPN9 530 aa23.08■■□□□ 1.28
SUSD1-204ENST00000374270 USP17L21D6R901 530 aa23.08■■□□□ 1.28
SUSD1-204ENST00000374270 CYP2D6P10635 497 aa23.08■■□□□ 1.28
SUSD1-204ENST00000374270 BRAPQ7Z569 592 aa23.08■■□□□ 1.28
SUSD1-204ENST00000374270 TMEM87BQ96K49 555 aa23.08■■□□□ 1.28
SUSD1-204ENST00000374270 STRCQ7RTU9 1775 aa23.08■■□□□ 1.28
SUSD1-204ENST00000374270 ZPR1O75312 459 aa23.07■■□□□ 1.28
SUSD1-204ENST00000374270 MINPP1Q9UNW1 487 aa23.07■■□□□ 1.28
SUSD1-204ENST00000374270 PRDX5P30044 214 aa23.07■■□□□ 1.28
SUSD1-204ENST00000374270 EVCP57679 992 aa23.07■■□□□ 1.28
SUSD1-204ENST00000374270 RBM43Q6ZSC3 357 aaKnown RBP23.07■■□□□ 1.28
SUSD1-204ENST00000374270 TMC6Q7Z403 805 aa23.07■■□□□ 1.28
SUSD1-204ENST00000374270 SETDB2Q96T68 719 aa23.07■■□□□ 1.28
SUSD1-204ENST00000374270 TNKSO95271 1327 aa23.07■■□□□ 1.28
SUSD1-204ENST00000374270 ATP1A3P13637 1013 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 TXNRD3Q86VQ6 643 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 AMIGO3Q86WK7 504 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 USP27XA6NNY8 438 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 SHC4Q6S5L8 630 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 ZNF654Q8IZM8 581 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 KRT23Q9C075 422 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 POLR3EQ9NVU0 708 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 V9GY48 417 aaPredicted RBP23.06■■□□□ 1.28
SUSD1-204ENST00000374270 PLA2G4DQ86XP0 818 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 CNNM3Q8NE01 707 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.06■■□□□ 1.28
SUSD1-204ENST00000374270 NAT10Q9H0A0 1025 aaKnown RBP23.06■■□□□ 1.28
SUSD1-204ENST00000374270 ANKIB1Q9P2G1 1089 aa23.06■■□□□ 1.28
SUSD1-204ENST00000374270 LAMA4Q16363 1823 aa23.05■■□□□ 1.28
SUSD1-204ENST00000374270 EP400Q96L91 3159 aa23.05■■□□□ 1.28
SUSD1-204ENST00000374270 MYO5AQ9Y4I1 1855 aaKnown RBP23.05■■□□□ 1.28
SUSD1-204ENST00000374270 STAMQ92783 540 aa23.05■■□□□ 1.28
SUSD1-204ENST00000374270 SKILP12757 684 aa23.05■■□□□ 1.28
SUSD1-204ENST00000374270 NTRK3Q16288 839 aa23.05■■□□□ 1.28
SUSD1-204ENST00000374270 AXDND1Q5T1B0 1012 aaPredicted RBP23.05■■□□□ 1.28
SUSD1-204ENST00000374270 RIOK3O14730 519 aaKnown RBP23.04■■□□□ 1.28
SUSD1-204ENST00000374270 COBLO75128 1261 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 SLC39A14Q15043 492 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 LONRF3Q496Y0 759 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.04■■□□□ 1.28
SUSD1-204ENST00000374270 PCDHB6Q9Y5E3 794 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 V9GYY5 206 aaPredicted RBP23.04■■□□□ 1.28
SUSD1-204ENST00000374270 YEATS4O95619 227 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 TNNT1P13805 278 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 CASP1P29466 404 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 FAM84BQ96KN1 310 aaPredicted RBP23.04■■□□□ 1.28
SUSD1-204ENST00000374270 XPO4Q9C0E2 1151 aaKnown RBP23.04■■□□□ 1.28
SUSD1-204ENST00000374270 SLIT2O94813 1529 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 PLEKHA8P1O95397 391 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 NOM1Q5C9Z4 860 aaKnown RBP23.04■■□□□ 1.28
SUSD1-204ENST00000374270 USP49Q70CQ1 688 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 NLRP3Q96P20 1036 aa23.04■■□□□ 1.28
SUSD1-204ENST00000374270 UBR2Q8IWV8 1755 aa23.03■■□□□ 1.28
SUSD1-204ENST00000374270 FANCBQ8NB91 859 aa23.03■■□□□ 1.28
SUSD1-204ENST00000374270 DISP2A7MBM2 1401 aa23.03■■□□□ 1.28
SUSD1-204ENST00000374270 ABCC6O95255 1503 aa23.03■■□□□ 1.28
SUSD1-204ENST00000374270 NAA30Q147X3 362 aaPredicted RBP23.03■■□□□ 1.28
SUSD1-204ENST00000374270 IFIT1BQ5T764 474 aaKnown RBP23.03■■□□□ 1.28
SUSD1-204ENST00000374270 CNNM2Q9H8M5 875 aa23.03■■□□□ 1.28
SUSD1-204ENST00000374270 ZNF512BQ96KM6 892 aaPredicted RBP23.02■■□□□ 1.28
SUSD1-204ENST00000374270 SERPINC1P01008 464 aa23.02■■□□□ 1.28
SUSD1-204ENST00000374270 AFMP43652 599 aa23.02■■□□□ 1.28
SUSD1-204ENST00000374270 RPS8P62241 208 aaKnown RBP23.02■■□□□ 1.28
SUSD1-204ENST00000374270 KLHL10Q6JEL2 608 aa23.02■■□□□ 1.28
SUSD1-204ENST00000374270 TRMT44Q8IYL2 757 aaKnown RBP23.02■■□□□ 1.28
SUSD1-204ENST00000374270 SHANK3Q9BYB0 1731 aa23.02■■□□□ 1.28
SUSD1-204ENST00000374270 ABCC12Q96J65 1359 aa23.02■■□□□ 1.28
SUSD1-204ENST00000374270 UBAP1LF5GYI3 381 aa23.02■■□□□ 1.27
SUSD1-204ENST00000374270 POLR2DO15514 142 aaKnown RBP23.02■■□□□ 1.27
SUSD1-204ENST00000374270 ESR2Q92731 530 aa23.01■■□□□ 1.27
SUSD1-204ENST00000374270 TMX1Q9H3N1 280 aa23.01■■□□□ 1.27
SUSD1-204ENST00000374270 CCNL1Q9UK58 526 aaPredicted RBP23.01■■□□□ 1.27
SUSD1-204ENST00000374270 SPATA31A5Q5VU36 1347 aa23.01■■□□□ 1.27
SUSD1-204ENST00000374270 SPATA31A7Q8IWB4 1347 aa23.01■■□□□ 1.27
SUSD1-204ENST00000374270 NOSTRINQ8IVI9 506 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms