RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.72□□□□□ -0.05
PRPF4-201ENST00000374198 KAT14Q9H8E8 782 aa14.72□□□□□ -0.05
PRPF4-201ENST00000374198 PATL2C9JE40 543 aaKnown RBP14.71□□□□□ -0.05
PRPF4-201ENST00000374198 WHAMMP3Q1A5X7 153 aa14.71□□□□□ -0.05
PRPF4-201ENST00000374198 ZNF569Q5MCW4 686 aa14.71□□□□□ -0.05
PRPF4-201ENST00000374198 CPLX2Q6PUV4 134 aaKnown RBP14.71□□□□□ -0.05
PRPF4-201ENST00000374198 ARHGEF25Q86VW2 580 aa14.71□□□□□ -0.05
PRPF4-201ENST00000374198 HPCAL4Q9UM19 191 aa14.71□□□□□ -0.05
PRPF4-201ENST00000374198 MARF1Q9Y4F3 1742 aaKnown RBP14.71□□□□□ -0.05
PRPF4-201ENST00000374198 SALL1Q9NSC2 1324 aa14.71□□□□□ -0.05
PRPF4-201ENST00000374198 TFRCP02786 760 aaKnown RBP14.71□□□□□ -0.06
PRPF4-201ENST00000374198 NLRP6P59044 892 aa14.71□□□□□ -0.06
PRPF4-201ENST00000374198 HSP90AB3PQ58FF7 597 aa14.71□□□□□ -0.06
PRPF4-201ENST00000374198 POLR3EQ9NVU0 708 aa14.71□□□□□ -0.06
PRPF4-201ENST00000374198 ADGRG1Q9Y653 693 aa14.71□□□□□ -0.06
PRPF4-201ENST00000374198 SOWAHDA6NJG2 315 aa14.7□□□□□ -0.06
PRPF4-201ENST00000374198 CMA1P23946 247 aa14.7□□□□□ -0.06
PRPF4-201ENST00000374198 NEDD9Q14511 834 aa14.7□□□□□ -0.06
PRPF4-201ENST00000374198 OLFM4Q6UX06 510 aa14.7□□□□□ -0.06
PRPF4-201ENST00000374198 NOA1Q8NC60 698 aaKnown RBP14.7□□□□□ -0.06
PRPF4-201ENST00000374198 MIEF2Q96C03 454 aa14.7□□□□□ -0.06
PRPF4-201ENST00000374198 TRPC5Q9UL62 973 aaPredicted RBP14.7□□□□□ -0.06
PRPF4-201ENST00000374198 ABCA3Q99758 1704 aa14.7□□□□□ -0.06
PRPF4-201ENST00000374198 ZC3H4Q9UPT8 1303 aaKnown RBP14.7□□□□□ -0.06
PRPF4-201ENST00000374198 CCT2P78371 535 aaKnown RBP14.7□□□□□ -0.06
PRPF4-201ENST00000374198 PPP2R5AQ15172 486 aa14.7□□□□□ -0.06
PRPF4-201ENST00000374198 FAM76AQ8TAV0 307 aa14.7□□□□□ -0.06
PRPF4-201ENST00000374198 PRDM11Q9NQV5 511 aa14.7□□□□□ -0.06
PRPF4-201ENST00000374198 A0A0U1RQJ8 604 aa14.69□□□□□ -0.06
PRPF4-201ENST00000374198 ELF1P32519 619 aa14.69□□□□□ -0.06
PRPF4-201ENST00000374198 ZC3H6P61129 1189 aaKnown RBP14.69□□□□□ -0.06
PRPF4-201ENST00000374198 ATRIPQ8WXE1 791 aa14.69□□□□□ -0.06
PRPF4-201ENST00000374198 RIN2Q8WYP3 895 aaPredicted RBP14.69□□□□□ -0.06
PRPF4-201ENST00000374198 MCM8Q9UJA3 840 aa14.69□□□□□ -0.06
PRPF4-201ENST00000374198 CAPN7Q9Y6W3 813 aa14.69□□□□□ -0.06
PRPF4-201ENST00000374198 PPFIA3O75145 1194 aa14.69□□□□□ -0.06
PRPF4-201ENST00000374198 BCAS4Q8TDM0 211 aa14.69□□□□□ -0.06
PRPF4-201ENST00000374198 BOLA2Q9H3K6 86 aa14.69□□□□□ -0.06
PRPF4-201ENST00000374198 SHTN1A0MZ66 631 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 FNTAP49354 379 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 STIM1Q13586 685 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 MAP9Q49MG5 647 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 HSP90AB2PQ58FF8 381 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 BEND3Q5T5X7 828 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 RAD9BQ6WBX8 426 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 PA2G4Q9UQ80 394 aaKnown RBP14.68□□□□□ -0.06
PRPF4-201ENST00000374198 SOCS7O14512 581 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 TAF7Q15545 349 aaPredicted RBP14.68□□□□□ -0.06
PRPF4-201ENST00000374198 SLC35F6Q8N357 371 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 XAGE2Q96GT9 111 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 PANX2Q96RD6 677 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 NCOA5Q9HCD5 579 aaKnown RBP14.68□□□□□ -0.06
PRPF4-201ENST00000374198 CARMIL3Q8ND23 1372 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 CACNA1FO60840 1977 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 POLR3DP05423 398 aaPredicted RBP14.68□□□□□ -0.06
PRPF4-201ENST00000374198 CYP21A2P08686 494 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 GGCXP38435 758 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 SYKP43405 635 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 HSP90AA4PQ58FG1 418 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 CCDC148Q8NFR7 591 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 COG1Q8WTW3 980 aa14.68□□□□□ -0.06
PRPF4-201ENST00000374198 EAF2Q96CJ1 260 aaPredicted RBP14.68□□□□□ -0.06
PRPF4-201ENST00000374198 NAPGQ99747 312 aaPredicted RBP14.68□□□□□ -0.06
PRPF4-201ENST00000374198 CCDC9Q9Y3X0 531 aaKnown RBP14.68□□□□□ -0.06
PRPF4-201ENST00000374198 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
PRPF4-201ENST00000374198 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 AKAP12Q02952 1782 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 MYO1FO00160 1098 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 CHUKO15111 745 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 PPFIA1Q13136 1202 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 PNOCQ13519 176 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 HDGFL1Q5TGJ6 251 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 TBC1D22AQ8WUA7 517 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 ZKSCAN4Q969J2 545 aaPredicted RBP14.67□□□□□ -0.06
PRPF4-201ENST00000374198 CCDC8Q9H0W5 538 aaPredicted RBP14.67□□□□□ -0.06
PRPF4-201ENST00000374198 COL15A1P39059 1388 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 BCL9LQ86UU0 1499 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 AKR1B15C9JRZ8 316 aaPredicted RBP14.67□□□□□ -0.06
PRPF4-201ENST00000374198 EIF3HO15372 352 aaKnown RBP eCLIP14.67□□□□□ -0.06
PRPF4-201ENST00000374198 MCM3P25205 808 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 RDXP35241 583 aaKnown RBP14.67□□□□□ -0.06
PRPF4-201ENST00000374198 DHX32Q7L7V1 743 aaKnown RBP14.67□□□□□ -0.06
PRPF4-201ENST00000374198 AMOTL1Q8IY63 956 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 CAPS2Q9BXY5 557 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 EHD4Q9H223 541 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 MROH7-TTC4A0A0A0MT08 1334 aa14.67□□□□□ -0.06
PRPF4-201ENST00000374198 ATXN2Q99700 1313 aaKnown RBP14.67□□□□□ -0.06
PRPF4-201ENST00000374198 GOLGA6CA6NDK9 693 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 H0YHG0 523 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 FSBPO95073 299 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 HMGB1P09429 215 aaKnown RBP14.66□□□□□ -0.06
PRPF4-201ENST00000374198 GOLGA6DP0CG33 693 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 AKAP17AQ02040 695 aaKnown RBP14.66□□□□□ -0.06
PRPF4-201ENST00000374198 CHRNA2Q15822 529 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 FAXDC2Q96IV6 333 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 NAA15Q9BXJ9 866 aaKnown RBP14.66□□□□□ -0.06
PRPF4-201ENST00000374198 VEZTQ9HBM0 779 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 CD248Q9HCU0 757 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 BTG4Q9NY30 223 aa14.66□□□□□ -0.06
PRPF4-201ENST00000374198 GOLGA6AQ9NYA3 693 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms