RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CCDC69A6NI79 296 aa27.63■■■□□ 2.01
CDK9-201ENST00000373264 CYP7A1P22680 504 aa27.63■■■□□ 2.01
CDK9-201ENST00000373264 GNL2Q13823 731 aaKnown RBP27.63■■■□□ 2.01
CDK9-201ENST00000373264 SLC39A14Q15043 492 aa27.63■■■□□ 2.01
CDK9-201ENST00000373264 MYRIPQ8NFW9 859 aa27.63■■■□□ 2.01
CDK9-201ENST00000373264 KCNJ14Q9UNX9 436 aa27.63■■■□□ 2.01
CDK9-201ENST00000373264 ARID3AQ99856 593 aa27.62■■■□□ 2.01
CDK9-201ENST00000373264 COL1A1P02452 1464 aaPredicted RBP27.62■■■□□ 2.01
CDK9-201ENST00000373264 BCL9LQ86UU0 1499 aa27.62■■■□□ 2.01
CDK9-201ENST00000373264 SPATA31A5Q5VU36 1347 aa27.62■■■□□ 2.01
CDK9-201ENST00000373264 SPATA31A7Q8IWB4 1347 aa27.62■■■□□ 2.01
CDK9-201ENST00000373264 CYP2D7A0A087X1C5 515 aa27.62■■■□□ 2.01
CDK9-201ENST00000373264 MINDY4BA8MYZ0 360 aa27.62■■■□□ 2.01
CDK9-201ENST00000373264 CAVIN2O95810 425 aa27.62■■■□□ 2.01
CDK9-201ENST00000373264 PTPAQ15257 358 aa27.62■■■□□ 2.01
CDK9-201ENST00000373264 SHC4Q6S5L8 630 aa27.62■■■□□ 2.01
CDK9-201ENST00000373264 NRAPQ86VF7 1730 aa27.61■■■□□ 2.01
CDK9-201ENST00000373264 CDKL5O76039 1030 aa27.61■■■□□ 2.01
CDK9-201ENST00000373264 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.61■■■□□ 2.01
CDK9-201ENST00000373264 CEP57L1Q8IYX8 460 aa27.61■■■□□ 2.01
CDK9-201ENST00000373264 MAP3K14Q99558 947 aa27.61■■■□□ 2.01
CDK9-201ENST00000373264 KLRK1P26718 216 aa27.61■■■□□ 2.01
CDK9-201ENST00000373264 EVX2Q03828 476 aa27.61■■■□□ 2.01
CDK9-201ENST00000373264 SPECC1Q5M775 1068 aa27.61■■■□□ 2.01
CDK9-201ENST00000373264 SARM1Q6SZW1 724 aa27.61■■■□□ 2.01
CDK9-201ENST00000373264 CDCA7Q9BWT1 371 aaPredicted RBP27.61■■■□□ 2.01
CDK9-201ENST00000373264 LIFRP42702 1097 aa27.6■■■□□ 2.01
CDK9-201ENST00000373264 FILIP1Q7Z7B0 1213 aa27.6■■■□□ 2.01
CDK9-201ENST00000373264 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.6■■■□□ 2.01
CDK9-201ENST00000373264 RAI14Q9P0K7 980 aa27.6■■■□□ 2.01
CDK9-201ENST00000373264 BTBD18B2RXH4 712 aa27.59■■■□□ 2.01
CDK9-201ENST00000373264 DYNC1I1O14576 645 aa27.59■■■□□ 2.01
CDK9-201ENST00000373264 SLC3A2P08195 630 aaKnown RBP27.59■■■□□ 2.01
CDK9-201ENST00000373264 CMA1P23946 247 aa27.59■■■□□ 2.01
CDK9-201ENST00000373264 DYNLL1P63167 89 aaKnown RBP27.59■■■□□ 2.01
CDK9-201ENST00000373264 CPLX2Q6PUV4 134 aaKnown RBP27.59■■■□□ 2.01
CDK9-201ENST00000373264 C16orf45Q96MC5 204 aaPredicted RBP27.59■■■□□ 2.01
CDK9-201ENST00000373264 FAM98CQ17RN3 349 aaKnown RBP27.59■■■□□ 2.01
CDK9-201ENST00000373264 NUP133Q8WUM0 1156 aa27.59■■■□□ 2.01
CDK9-201ENST00000373264 STAG1Q8WVM7 1258 aa27.59■■■□□ 2.01
CDK9-201ENST00000373264 CELF1Q92879 486 aaKnown RBP27.59■■■□□ 2.01
CDK9-201ENST00000373264 THRAP3Q9Y2W1 955 aaKnown RBP27.59■■■□□ 2.01
CDK9-201ENST00000373264 PNPLA7Q6ZV29 1317 aa27.58■■■□□ 2.01
CDK9-201ENST00000373264 SSRP1Q08945 709 aaKnown RBP27.58■■■□□ 2.01
CDK9-201ENST00000373264 ZNF384Q8TF68 577 aa27.58■■■□□ 2.01
CDK9-201ENST00000373264 SLC51AQ86UW1 340 aa27.58■■■□□ 2.01
CDK9-201ENST00000373264 BCORQ6W2J9 1755 aa27.58■■■□□ 2
CDK9-201ENST00000373264 U2AF2P26368 475 aaKnown RBP eCLIP27.57■■■□□ 21e-7■■□□□ 11.8
CDK9-201ENST00000373264 PPARAQ07869 468 aa27.57■■■□□ 2
CDK9-201ENST00000373264 WTAPQ15007 396 aa27.57■■■□□ 2
CDK9-201ENST00000373264 NACAP1Q9BZK3 213 aa27.57■■■□□ 2
CDK9-201ENST00000373264 KRT23Q9C075 422 aa27.57■■■□□ 2
CDK9-201ENST00000373264 GRIN1Q05586 938 aa27.57■■■□□ 2
CDK9-201ENST00000373264 MRFAP1L1Q96HT8 127 aa27.57■■■□□ 2
CDK9-201ENST00000373264 CNNM2Q9H8M5 875 aa27.57■■■□□ 2
CDK9-201ENST00000373264 CICQ96RK0 1608 aaPredicted RBP27.56■■■□□ 2
CDK9-201ENST00000373264 PRDM1O75626 825 aa27.56■■■□□ 2
CDK9-201ENST00000373264 FMNL1O95466 1100 aaPredicted RBP27.56■■■□□ 2
CDK9-201ENST00000373264 PIP4K2BP78356 416 aa27.56■■■□□ 2
CDK9-201ENST00000373264 RREB1Q92766 1687 aa27.56■■■□□ 2
CDK9-201ENST00000373264 RTL9Q8NET4 1388 aa27.56■■■□□ 2
CDK9-201ENST00000373264 hCG_1642624A0A1W2PR95 340 aa27.56■■■□□ 2
CDK9-201ENST00000373264 CDC25BP30305 580 aa27.56■■■□□ 2
CDK9-201ENST00000373264 TRIM29Q14134 588 aa27.56■■■□□ 2
CDK9-201ENST00000373264 TBC1D9BQ66K14 1250 aa27.56■■■□□ 2
CDK9-201ENST00000373264 ANKRD18AQ8IVF6 992 aa27.56■■■□□ 2
CDK9-201ENST00000373264 LRRC8AQ8IWT6 810 aa27.56■■■□□ 2
CDK9-201ENST00000373264 PRIMPOLQ96LW4 560 aa27.56■■■□□ 2
CDK9-201ENST00000373264 USP27XA6NNY8 438 aa27.55■■■□□ 2
CDK9-201ENST00000373264 SYKP43405 635 aa27.55■■■□□ 2
CDK9-201ENST00000373264 TOB1P50616 345 aaPredicted RBP27.55■■■□□ 2
CDK9-201ENST00000373264 NR5A1Q13285 461 aa27.55■■■□□ 2
CDK9-201ENST00000373264 PNOCQ13519 176 aa27.55■■■□□ 2
CDK9-201ENST00000373264 RTN1Q16799 776 aa27.55■■■□□ 2
CDK9-201ENST00000373264 NBPF11Q86T75 865 aa27.55■■■□□ 2
CDK9-201ENST00000373264 TIAM2Q8IVF5 1701 aa27.55■■■□□ 2
CDK9-201ENST00000373264 CDC5LQ99459 802 aaKnown RBP27.55■■■□□ 2
CDK9-201ENST00000373264 SRP68Q9UHB9 627 aaKnown RBP27.55■■■□□ 2
CDK9-201ENST00000373264 MINPP1Q9UNW1 487 aa27.55■■■□□ 2
CDK9-201ENST00000373264 RIOK3O14730 519 aaKnown RBP27.54■■■□□ 2
CDK9-201ENST00000373264 IFNAR1P17181 557 aa27.54■■■□□ 2
CDK9-201ENST00000373264 OXER1Q8TDS5 423 aa27.54■■■□□ 2
CDK9-201ENST00000373264 SHISA4Q96DD7 197 aa27.54■■■□□ 2
CDK9-201ENST00000373264 JAG2Q9Y219 1238 aa27.54■■■□□ 2
CDK9-201ENST00000373264 ZNF804BA4D1E1 1349 aa27.54■■■□□ 2
CDK9-201ENST00000373264 BAZ2AQ9UIF9 1905 aaKnown RBP27.54■■■□□ 2
CDK9-201ENST00000373264 MAGEB6P1A0A0J9YX57 407 aa27.53■■■□□ 2
CDK9-201ENST00000373264 FOXN1O15353 648 aa27.53■■■□□ 2
CDK9-201ENST00000373264 HPSEQ9Y251 543 aa27.53■■■□□ 2
CDK9-201ENST00000373264 GNAT2P19087 354 aa27.53■■■□□ 2
CDK9-201ENST00000373264 FAM182BQ5T319 152 aa27.53■■■□□ 2
CDK9-201ENST00000373264 DIS3L2Q8IYB7 885 aaKnown RBP27.53■■■□□ 2
CDK9-201ENST00000373264 BCL2L12Q9HB09 334 aa27.53■■■□□ 2
CDK9-201ENST00000373264 ATP2B1P20020 1258 aa27.52■■■□□ 2
CDK9-201ENST00000373264 ZRSR1Q15695 479 aaKnown RBP27.52■■■□□ 2
CDK9-201ENST00000373264 ZNF710Q8N1W2 664 aa27.52■■■□□ 2
CDK9-201ENST00000373264 FAM84BQ96KN1 310 aaPredicted RBP27.52■■■□□ 2
CDK9-201ENST00000373264 RIOK1Q9BRS2 568 aaKnown RBP27.52■■■□□ 2
CDK9-201ENST00000373264 NAT10Q9H0A0 1025 aaKnown RBP27.52■■■□□ 2
CDK9-201ENST00000373264 ZNF652Q9Y2D9 606 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms