RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 USH1GQ495M9 461 aa10.08□□□□□ -0.8
PTPRT-206ENST00000373198 HHATQ5VTY9 493 aa10.08□□□□□ -0.8
PTPRT-206ENST00000373198 TAOK1Q7L7X3 1001 aa10.08□□□□□ -0.8
PTPRT-206ENST00000373198 CCDC94Q9BW85 323 aaPredicted RBP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 USH1CQ9Y6N9 552 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 ANKRD12Q6UB98 2062 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 TRIM75PA6NK02 468 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 UQCRFS1P1P0C7P4 283 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 ZNF365Q70YC5 407 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 NOX5Q96PH1 765 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 NUCKS1Q9H1E3 243 aaKnown RBP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 FNDC3AQ9Y2H6 1198 aaKnown RBP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 HNRNPCL2B2RXH8 293 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 HNRNPCL1O60812 293 aaKnown RBP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 KRT3P12035 628 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 NSFL1CQ9UNZ2 370 aaKnown RBP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 TRIM56Q9BRZ2 755 aaKnown RBP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 TEX13AQ9BXU3 409 aaPredicted RBP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 ASIC3Q9UHC3 531 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 BAG5Q9UL15 447 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 GAPVD1Q14C86 1478 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 NOLC1Q14978 699 aaKnown RBP eCLIP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 PPP4R1Q8TF05 950 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 ZSCAN16Q9H4T2 348 aaPredicted RBP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 ATICP31939 592 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 SPDL1Q96EA4 605 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 LDHBP07195 334 aaKnown RBP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 SLC12A1Q13621 1099 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 TRIM68Q6AZZ1 485 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 JADE1Q6IE81 842 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 SPAG1Q07617 926 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 RUFY3Q7L099 469 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 NME9Q86XW9 330 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 VWA3AA6NCI4 1184 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 HP1BP3Q5SSJ5 553 aaPredicted RBP10.07□□□□□ -0.8
PTPRT-206ENST00000373198 SSH1Q8WYL5 1049 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 ABCF3Q9NUQ8 709 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 AMOTL2Q9Y2J4 779 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 GNA11P29992 359 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 SLC9C2Q5TAH2 1124 aa10.07□□□□□ -0.8
PTPRT-206ENST00000373198 ATAD2Q6PL18 1390 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 DNAJC25Q9H1X3 360 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 VCX3AQ9NNX9 186 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 POLA1P09884 1462 aaPredicted RBP10.06□□□□□ -0.8
PTPRT-206ENST00000373198 LRPPRCP42704 1394 aaKnown RBP10.06□□□□□ -0.8
PTPRT-206ENST00000373198 PLCG2P16885 1265 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 RNF168Q8IYW5 571 aaPredicted RBP10.06□□□□□ -0.8
PTPRT-206ENST00000373198 FRMD3A2A2Y4 597 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 PI4KAP2A4QPH2 592 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 PHEXP78562 749 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 PI4KAP1Q8N8J0 262 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 TACO1Q9BSH4 297 aaKnown RBP10.06□□□□□ -0.8
PTPRT-206ENST00000373198 CCDC61Q9Y6R9 512 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 SPECC1L-ADORA2AF8WAN1 911 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 AZI2Q9H6S1 392 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 MYCP01106 439 aaPredicted RBP10.06□□□□□ -0.8
PTPRT-206ENST00000373198 ANKRD35Q8N283 1001 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 FAM193BQ96PV7 902 aaPredicted RBP10.06□□□□□ -0.8
PTPRT-206ENST00000373198 TSNAXIP1Q2TAA8 658 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 CD19P15391 556 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 XPAP23025 273 aaPredicted RBP10.06□□□□□ -0.8
PTPRT-206ENST00000373198 ASIC2Q16515 512 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 LETM2Q2VYF4 491 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 SESTD1Q86VW0 696 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 ARHGEF10LQ9HCE6 1279 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 NYXQ9GZU5 481 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 FAM135AQ9P2D6 1515 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 SYNJ2BP-COX16A0A087WUM0 186 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 MRPS27Q92552 414 aaKnown RBP10.06□□□□□ -0.8
PTPRT-206ENST00000373198 COX16Q9P0S2 106 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 STK38LQ9Y2H1 464 aa10.06□□□□□ -0.8
PTPRT-206ENST00000373198 EPRSP07814 1512 aaKnown RBP10.06□□□□□ -0.8
PTPRT-206ENST00000373198 PALM3A6NDB9 673 aaPredicted RBP10.05□□□□□ -0.8
PTPRT-206ENST00000373198 TMTC2Q8N394 836 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 HELBQ8NG08 1087 aaPredicted RBP10.05□□□□□ -0.8
PTPRT-206ENST00000373198 SPC25Q9HBM1 224 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 FANCD2Q9BXW9 1451 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 PHLDB2Q86SQ0 1253 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 MAFGO15525 162 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 SPDYE1Q8NFV5 336 aaPredicted RBP10.05□□□□□ -0.8
PTPRT-206ENST00000373198 MAPK8IP1Q9UQF2 711 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 VPS41P49754 854 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 ARHGAP42A6NI28 874 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 CALUO43852 315 aaPredicted RBP10.05□□□□□ -0.8
PTPRT-206ENST00000373198 KRT28Q7Z3Y7 464 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 HACE1Q8IYU2 909 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 SMCR8Q8TEV9 937 aaPredicted RBP10.05□□□□□ -0.8
PTPRT-206ENST00000373198 TBC1D2Q9BYX2 928 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 ARHGEF35A5YM69 484 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 NCAPH2Q6IBW4 605 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 GANCQ8TET4 914 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 RMDN2Q96LZ7 410 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 KIF22Q14807 665 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 TBC1D9Q6ZT07 1266 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 HDAC11Q96DB2 347 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 HAUS8Q9BT25 410 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 PAGR1Q9BTK6 254 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 MYO1AQ9UBC5 1043 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 ZNF174Q15697 407 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 ATP2A3Q93084 1043 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms