RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 SUCLG2Q96I99 432 aa19.77■□□□□ 0.76
TRAPPC3-203ENST00000373163 FAM198AQ9UFP1 575 aa19.77■□□□□ 0.76
TRAPPC3-203ENST00000373163 CUL9Q8IWT3 2517 aa19.77■□□□□ 0.76
TRAPPC3-203ENST00000373163 ALPK3Q96L96 1907 aa19.76■□□□□ 0.75
TRAPPC3-203ENST00000373163 PHF20L1A8MW92 1017 aa19.76■□□□□ 0.75
TRAPPC3-203ENST00000373163 VAMP4O75379 141 aa19.76■□□□□ 0.75
TRAPPC3-203ENST00000373163 PDE8BO95263 885 aa19.76■□□□□ 0.75
TRAPPC3-203ENST00000373163 VGLL2Q8N8G2 317 aa19.76■□□□□ 0.75
TRAPPC3-203ENST00000373163 KAZALD1Q96I82 304 aa19.76■□□□□ 0.75
TRAPPC3-203ENST00000373163 HMX1Q9NP08 348 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC3-203ENST00000373163 IL16Q14005 1332 aa19.76■□□□□ 0.75
TRAPPC3-203ENST00000373163 ATRNL1Q5VV63 1379 aa19.75■□□□□ 0.75
TRAPPC3-203ENST00000373163 DIXDC1Q155Q3 683 aa19.75■□□□□ 0.75
TRAPPC3-203ENST00000373163 ZFPM1Q8IX07 1006 aa19.75■□□□□ 0.75
TRAPPC3-203ENST00000373163 WDR66Q8TBY9 1149 aa19.75■□□□□ 0.75
TRAPPC3-203ENST00000373163 KIF16BQ96L93 1317 aa19.75■□□□□ 0.75
TRAPPC3-203ENST00000373163 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
TRAPPC3-203ENST00000373163 ALDH1L1O75891 902 aa19.74■□□□□ 0.75
TRAPPC3-203ENST00000373163 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC3-203ENST00000373163 FAM110CQ1W6H9 321 aa19.74■□□□□ 0.75
TRAPPC3-203ENST00000373163 GUCD1Q96NT3 240 aa19.74■□□□□ 0.75
TRAPPC3-203ENST00000373163 PRKRIP1Q9H875 184 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC3-203ENST00000373163 USP40Q9NVE5 1235 aa19.74■□□□□ 0.75
TRAPPC3-203ENST00000373163 AGTPBP1Q9UPW5 1226 aa19.74■□□□□ 0.75
TRAPPC3-203ENST00000373163 UNC80Q8N2C7 3258 aa19.74■□□□□ 0.75
TRAPPC3-203ENST00000373163 TRIM75PA6NK02 468 aa19.73■□□□□ 0.75
TRAPPC3-203ENST00000373163 IFIT1P09914 478 aaKnown RBP19.73■□□□□ 0.75
TRAPPC3-203ENST00000373163 TRIM32Q13049 653 aa19.73■□□□□ 0.75
TRAPPC3-203ENST00000373163 OGDHLQ9ULD0 1010 aa19.73■□□□□ 0.75
TRAPPC3-203ENST00000373163 PUM3Q15397 648 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-203ENST00000373163 FAM109BQ6ICB4 259 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-203ENST00000373163 SLC4A10Q6U841 1118 aa19.72■□□□□ 0.75
TRAPPC3-203ENST00000373163 SRCIN1Q9C0H9 1055 aa19.72■□□□□ 0.75
TRAPPC3-203ENST00000373163 PNMA3Q9UL41 463 aa19.72■□□□□ 0.75
TRAPPC3-203ENST00000373163 LRRFIP2Q9Y608 721 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-203ENST00000373163 POTEB2H3BUK9 544 aa19.71■□□□□ 0.75
TRAPPC3-203ENST00000373163 NBPF7P0C2Y1 421 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC3-203ENST00000373163 PRDX5P30044 214 aa19.71■□□□□ 0.75
TRAPPC3-203ENST00000373163 TREML2Q5T2D2 321 aa19.71■□□□□ 0.75
TRAPPC3-203ENST00000373163 BICC1Q9H694 974 aaKnown RBP19.71■□□□□ 0.75
TRAPPC3-203ENST00000373163 SPINK5Q9NQ38 1064 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC3-203ENST00000373163 PFASO15067 1338 aa19.71■□□□□ 0.75
TRAPPC3-203ENST00000373163 FGFR2P21802 821 aa19.7■□□□□ 0.74
TRAPPC3-203ENST00000373163 RABL6Q3YEC7 729 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC3-203ENST00000373163 ZSCAN29Q8IWY8 852 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC3-203ENST00000373163 GJD2Q9UKL4 321 aa19.7■□□□□ 0.74
TRAPPC3-203ENST00000373163 DDX60LQ5H9U9 1706 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-203ENST00000373163 CTNND1O60716 968 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-203ENST00000373163 ENTPD3O75355 529 aa19.69■□□□□ 0.74
TRAPPC3-203ENST00000373163 GCLCP48506 637 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC3-203ENST00000373163 RGS3P49796 1198 aa19.69■□□□□ 0.74
TRAPPC3-203ENST00000373163 MDM2Q00987 491 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC3-203ENST00000373163 EXOSC9Q06265 439 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-203ENST00000373163 KLHDC4Q8TBB5 520 aa19.69■□□□□ 0.74
TRAPPC3-203ENST00000373163 FAM161BQ96MY7 647 aa19.69■□□□□ 0.74
TRAPPC3-203ENST00000373163 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC3-203ENST00000373163 LDHBP07195 334 aaKnown RBP19.68■□□□□ 0.74
TRAPPC3-203ENST00000373163 MAP3K10Q02779 954 aa19.68■□□□□ 0.74
TRAPPC3-203ENST00000373163 CCDC84Q86UT8 332 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC3-203ENST00000373163 TRIB2Q92519 343 aa19.68■□□□□ 0.74
TRAPPC3-203ENST00000373163 IDI2Q9BXS1 227 aa19.68■□□□□ 0.74
TRAPPC3-203ENST00000373163 PRDM6Q9NQX0 595 aa19.68■□□□□ 0.74
TRAPPC3-203ENST00000373163 SLURP2P0DP57 97 aa19.67■□□□□ 0.74
TRAPPC3-203ENST00000373163 SLC5A1P13866 664 aa19.67■□□□□ 0.74
TRAPPC3-203ENST00000373163 SH3BP5LQ7L8J4 393 aa19.67■□□□□ 0.74
TRAPPC3-203ENST00000373163 ANKRD44Q8N8A2 993 aa19.67■□□□□ 0.74
TRAPPC3-203ENST00000373163 PROCA1Q8NCQ7 364 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC3-203ENST00000373163 UTYO14607 1347 aa19.67■□□□□ 0.74
TRAPPC3-203ENST00000373163 COL6A1P12109 1028 aa19.66■□□□□ 0.74
TRAPPC3-203ENST00000373163 PRKAR2AP13861 404 aaKnown RBP19.66■□□□□ 0.74
TRAPPC3-203ENST00000373163 MAP3K21Q5TCX8 1036 aa19.66■□□□□ 0.74
TRAPPC3-203ENST00000373163 LPIN2Q92539 896 aa19.66■□□□□ 0.74
TRAPPC3-203ENST00000373163 COL2A1P02458 1487 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC3-203ENST00000373163 DDTLA6NHG4 134 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC3-203ENST00000373163 LRRC26Q2I0M4 334 aa19.65■□□□□ 0.74
TRAPPC3-203ENST00000373163 ZNF697Q5TEC3 545 aa19.65■□□□□ 0.74
TRAPPC3-203ENST00000373163 RFX7Q2KHR2 1363 aa19.65■□□□□ 0.74
TRAPPC3-203ENST00000373163 CYP2B6P20813 491 aa19.64■□□□□ 0.73
TRAPPC3-203ENST00000373163 PABPC4Q13310 644 aaKnown RBP eCLIP19.64■□□□□ 0.732e-6■□□□□ 10.8
TRAPPC3-203ENST00000373163 SALL1Q9NSC2 1324 aa19.63■□□□□ 0.73
TRAPPC3-203ENST00000373163 SPP2Q13103 211 aa19.63■□□□□ 0.73
TRAPPC3-203ENST00000373163 CACNA1FO60840 1977 aa19.63■□□□□ 0.73
TRAPPC3-203ENST00000373163 AK9Q5TCS8 1911 aa19.63■□□□□ 0.73
TRAPPC3-203ENST00000373163 DOCK2Q92608 1830 aa19.62■□□□□ 0.73
TRAPPC3-203ENST00000373163 GAKO14976 1311 aa19.62■□□□□ 0.73
TRAPPC3-203ENST00000373163 PICALMQ13492 652 aa19.62■□□□□ 0.73
TRAPPC3-203ENST00000373163 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-203ENST00000373163 LBHD1Q9BQE6 289 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC3-203ENST00000373163 ASCC2Q9H1I8 757 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC3-203ENST00000373163 DDX4Q9NQI0 724 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-203ENST00000373163 GNL3LQ9NVN8 582 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-203ENST00000373163 XRCC5P13010 732 aaKnown RBP19.61■□□□□ 0.73
TRAPPC3-203ENST00000373163 HMGCS2P54868 508 aa19.61■□□□□ 0.73
TRAPPC3-203ENST00000373163 ZNF280CQ8ND82 737 aa19.61■□□□□ 0.73
TRAPPC3-203ENST00000373163 MAFAQ8NHW3 353 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC3-203ENST00000373163 SOCS4Q8WXH5 440 aa19.61■□□□□ 0.73
TRAPPC3-203ENST00000373163 CDX2Q99626 313 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC3-203ENST00000373163 NUDT12Q9BQG2 462 aa19.61■□□□□ 0.73
TRAPPC3-203ENST00000373163 MORF4L1Q9UBU8 362 aa19.61■□□□□ 0.73
TRAPPC3-203ENST00000373163 DOCK1Q14185 1865 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms