RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 HARSP12081 509 aaKnown RBP12.89□□□□□ -0.35
VCL-202ENST00000372755 KRT9P35527 623 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 NEDD9Q14511 834 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 CACNA2D3Q8IZS8 1091 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 CCDC94Q9BW85 323 aaPredicted RBP12.89□□□□□ -0.35
VCL-202ENST00000372755 RXRAP19793 462 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 HSPA1LP34931 641 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 OGFRQ9NZT2 677 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 MAST3O60307 1309 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 TBC1D31Q96DN5 1066 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 PICK1Q9NRD5 415 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 CEP85LQ5SZL2 805 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 NFATC2IPQ8NCF5 419 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 PKD2L1Q9P0L9 805 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 HMGXB3Q12766 1538 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 CETN3O15182 167 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 CWF19L2Q2TBE0 894 aaKnown RBP12.88□□□□□ -0.35
VCL-202ENST00000372755 TAOK1Q7L7X3 1001 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 WDR66Q8TBY9 1149 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 AFAP1L1Q8TED9 768 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 EVCP57679 992 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 ERO1AQ96HE7 468 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 GPCPD1Q9NPB8 672 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 HAUS2Q9NVX0 235 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 ZRANB1Q9UGI0 708 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
VCL-202ENST00000372755 GIPC1O14908 333 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 RPS6KB1P23443 525 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 LLPHQ9BRT6 129 aaKnown RBP12.87□□□□□ -0.35
VCL-202ENST00000372755 NOD1Q9Y239 953 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 CUL7Q14999 1698 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 A0A1B0GVL5 298 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 IFT20Q8IY31 132 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 VCX3BQ9H321 246 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 BICC1Q9H694 974 aaKnown RBP12.87□□□□□ -0.35
VCL-202ENST00000372755 ARHGEF35A5YM69 484 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 C8orf37Q96NL8 207 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 CHMP2AO43633 222 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 CCNT1O60563 726 aaKnown RBP12.87□□□□□ -0.35
VCL-202ENST00000372755 MAP7Q14244 749 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 ANO1Q5XXA6 986 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 SAP30BPQ9UHR5 308 aaKnown RBP12.87□□□□□ -0.35
VCL-202ENST00000372755 ABCA10Q8WWZ4 1543 aa12.87□□□□□ -0.35
VCL-202ENST00000372755 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 SRGAP1Q7Z6B7 1085 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 KCNH3Q9ULD8 1083 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 POLR3AO14802 1390 aaPredicted RBP12.86□□□□□ -0.35
VCL-202ENST00000372755 SYNRGQ9UMZ2 1314 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
VCL-202ENST00000372755 PIK3AP1Q6ZUJ8 805 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 BIN2Q9UBW5 565 aaPredicted RBP12.86□□□□□ -0.35
VCL-202ENST00000372755 KDM5BQ9UGL1 1544 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 CASQ2O14958 399 aaPredicted RBP12.86□□□□□ -0.35
VCL-202ENST00000372755 CUTAO60888 179 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 LGSNQ5TDP6 509 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 CCDC125Q86Z20 511 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 PLEKHM2Q8IWE5 1019 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 CSGALNACT2Q8N6G5 542 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 SECISBP2LQ93073 1101 aaKnown RBP12.86□□□□□ -0.35
VCL-202ENST00000372755 HOOK2Q96ED9 719 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 FBLN1P23142 703 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 GBP1P32455 592 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 PAK1Q13153 545 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 GKAP1Q5VSY0 366 aaPredicted RBP12.86□□□□□ -0.35
VCL-202ENST00000372755 GBP6Q6ZN66 633 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 PRPF31Q8WWY3 499 aaKnown RBP12.86□□□□□ -0.35
VCL-202ENST00000372755 VPS16Q9H269 839 aa12.86□□□□□ -0.35
VCL-202ENST00000372755 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
VCL-202ENST00000372755 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.86□□□□□ -0.356e-10■■□□□ 13
VCL-202ENST00000372755 PUM3Q15397 648 aaKnown RBP12.85□□□□□ -0.35
VCL-202ENST00000372755 HIBADHP31937 336 aaKnown RBP12.85□□□□□ -0.35
VCL-202ENST00000372755 HPDP32754 393 aaPredicted RBP12.85□□□□□ -0.35
VCL-202ENST00000372755 SLC9C1Q4G0N8 1177 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 LMNTD2Q8IXW0 634 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 USP26Q9BXU7 913 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 UHRF1BP1LA0JNW5 1464 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 ZFYVE9O95405 1425 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 NUP160Q12769 1436 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 FCHSD1Q86WN1 690 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 NSMCE1Q8WV22 266 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 UBAP1LF5GYI3 381 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 RUFY4Q6ZNE9 571 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 KRT25Q7Z3Z0 450 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 SYCE1Q8N0S2 351 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 VAMP4O75379 141 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 C8orf34Q49A92 452 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 SDCCAG8Q86SQ7 713 aaPredicted RBP12.85□□□□□ -0.35
VCL-202ENST00000372755 ARHGAP24Q8N264 748 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 MLKLQ8NB16 471 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 PROCA1Q8NCQ7 364 aaPredicted RBP12.85□□□□□ -0.35
VCL-202ENST00000372755 TSKSQ9UJT2 592 aa12.85□□□□□ -0.35
VCL-202ENST00000372755 B4E1Z4 1266 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 NOP56O00567 594 aaKnown RBP12.84□□□□□ -0.35
VCL-202ENST00000372755 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
VCL-202ENST00000372755 UFL1O94874 794 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 CNBD1Q8NA66 436 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms