RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 SCRN1Q12765 414 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 WDR93Q6P2C0 686 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 ZSWIM4Q9H7M6 989 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 TLR7Q9NYK1 1049 aaKnown RBP20.88■□□□□ 0.93
MMP9-201ENST00000372330 MRC1P22897 1456 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 BIN1O00499 593 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 KIF5CO60282 957 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 Q6ZUG5 572 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 TOGARAM2Q6ZUX3 1019 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 NSUN7Q8NE18 718 aaKnown RBP20.87■□□□□ 0.93
MMP9-201ENST00000372330 PUF60Q9UHX1 559 aaKnown RBP20.87■□□□□ 0.93
MMP9-201ENST00000372330 MED23Q9ULK4 1368 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 ZNF202O95125 648 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 YEATS4O95619 227 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 DDR1Q08345 913 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 EPHA10Q5JZY3 1008 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 LINC00301Q8NCQ3 95 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 KLHDC4Q8TBB5 520 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 SUGCTQ9HAC7 445 aa20.87■□□□□ 0.93
MMP9-201ENST00000372330 PRPF6O94906 941 aaKnown RBP20.86■□□□□ 0.93
MMP9-201ENST00000372330 MCM3P25205 808 aa20.86■□□□□ 0.93
MMP9-201ENST00000372330 LIG3P49916 1009 aa20.86■□□□□ 0.93
MMP9-201ENST00000372330 CNPY4Q8N129 248 aa20.86■□□□□ 0.93
MMP9-201ENST00000372330 TUBE1Q9UJT0 475 aa20.86■□□□□ 0.93
MMP9-201ENST00000372330 FAM169AQ9Y6X4 670 aa20.86■□□□□ 0.93
MMP9-201ENST00000372330 CALRP27797 417 aaKnown RBP20.86■□□□□ 0.93
MMP9-201ENST00000372330 VSNL1P62760 191 aa20.86■□□□□ 0.93
MMP9-201ENST00000372330 KCNG1Q9UIX4 513 aa20.86■□□□□ 0.93
MMP9-201ENST00000372330 CCDC189A1A4V9 331 aa20.85■□□□□ 0.93
MMP9-201ENST00000372330 WHAMMP3Q1A5X7 153 aa20.85■□□□□ 0.93
MMP9-201ENST00000372330 GBP6Q6ZN66 633 aa20.85■□□□□ 0.93
MMP9-201ENST00000372330 TC2NQ8N9U0 490 aa20.85■□□□□ 0.93
MMP9-201ENST00000372330 BOLA2Q9H3K6 86 aa20.85■□□□□ 0.93
MMP9-201ENST00000372330 TAF6LQ9Y6J9 622 aa20.85■□□□□ 0.93
MMP9-201ENST00000372330 CTAGE15A4D2H0 777 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 CTAGE8P0CG41 777 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 STK38Q15208 465 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 SPECC1LQ69YQ0 1117 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 WWC2Q6AWC2 1192 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 KCNV1Q6PIU1 500 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 CTAGE6Q86UF2 777 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 CTAGE4Q8IX94 777 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 SMARCC1Q92922 1105 aaPredicted RBP20.84■□□□□ 0.93
MMP9-201ENST00000372330 COPRSQ9NQ92 184 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 POLR3EQ9NVU0 708 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 A0A0D9SFI3 127 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 LRRIQ3A6PVS8 624 aaPredicted RBP20.84■□□□□ 0.93
MMP9-201ENST00000372330 SYF2O95926 243 aaKnown RBP20.84■□□□□ 0.93
MMP9-201ENST00000372330 HMGB1P09429 215 aaKnown RBP20.84■□□□□ 0.93
MMP9-201ENST00000372330 MAP9Q49MG5 647 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 PRPF38AQ8NAV1 312 aaKnown RBP20.84■□□□□ 0.93
MMP9-201ENST00000372330 PLEKHA4Q9H4M7 779 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
MMP9-201ENST00000372330 PTPDC1A2A3K4 754 aa20.83■□□□□ 0.93
MMP9-201ENST00000372330 PPP1R12AO14974 1030 aaPredicted RBP20.83■□□□□ 0.93
MMP9-201ENST00000372330 INPP5BP32019 993 aa20.83■□□□□ 0.93
MMP9-201ENST00000372330 OLFM4Q6UX06 510 aa20.83■□□□□ 0.93
MMP9-201ENST00000372330 GIMAP7Q8NHV1 300 aa20.83■□□□□ 0.93
MMP9-201ENST00000372330 GNL3LQ9NVN8 582 aaKnown RBP20.83■□□□□ 0.93
MMP9-201ENST00000372330 ATXN2Q99700 1313 aaKnown RBP20.83■□□□□ 0.92
MMP9-201ENST00000372330 CTAGE9A4FU28 777 aa20.83■□□□□ 0.92
MMP9-201ENST00000372330 TAF5LO75529 589 aa20.83■□□□□ 0.92
MMP9-201ENST00000372330 CMA1P23946 247 aa20.83■□□□□ 0.92
MMP9-201ENST00000372330 GOLGA8FQ08AF8 430 aa20.83■□□□□ 0.92
MMP9-201ENST00000372330 GOLGA8DPQ0D2H9 430 aa20.83■□□□□ 0.92
MMP9-201ENST00000372330 KIF4BQ2VIQ3 1234 aa20.83■□□□□ 0.92
MMP9-201ENST00000372330 ILDR1Q86SU0 546 aaPredicted RBP20.83■□□□□ 0.92
MMP9-201ENST00000372330 PDILTQ8N807 584 aa20.83■□□□□ 0.92
MMP9-201ENST00000372330 FSD1Q9BTV5 496 aa20.83■□□□□ 0.92
MMP9-201ENST00000372330 TMEM232C9JQI7 657 aa20.82■□□□□ 0.92
MMP9-201ENST00000372330 KARSQ15046 597 aaKnown RBP20.82■□□□□ 0.92
MMP9-201ENST00000372330 HSP90AB3PQ58FF7 597 aa20.82■□□□□ 0.92
MMP9-201ENST00000372330 CABS1Q96KC9 395 aa20.82■□□□□ 0.92
MMP9-201ENST00000372330 NAA15Q9BXJ9 866 aaKnown RBP20.82■□□□□ 0.92
MMP9-201ENST00000372330 SPTLC2O15270 562 aa20.82■□□□□ 0.92
MMP9-201ENST00000372330 CABP4P57796 275 aa20.82■□□□□ 0.92
MMP9-201ENST00000372330 PKD1L3Q7Z443 1732 aa20.81■□□□□ 0.92
MMP9-201ENST00000372330 COL15A1P39059 1388 aa20.81■□□□□ 0.92
MMP9-201ENST00000372330 CDHR2Q9BYE9 1310 aa20.81■□□□□ 0.92
MMP9-201ENST00000372330 RHOXF2BP0C7M4 288 aa20.81■□□□□ 0.92
MMP9-201ENST00000372330 RFX5P48382 616 aaPredicted RBP20.81■□□□□ 0.92
MMP9-201ENST00000372330 NEDD9Q14511 834 aa20.81■□□□□ 0.92
MMP9-201ENST00000372330 RABL6Q3YEC7 729 aaPredicted RBP20.81■□□□□ 0.92
MMP9-201ENST00000372330 RHOXF2Q9BQY4 288 aa20.81■□□□□ 0.92
MMP9-201ENST00000372330 CPDO75976 1380 aa20.81■□□□□ 0.92
MMP9-201ENST00000372330 SHTN1A0MZ66 631 aa20.81■□□□□ 0.92
MMP9-201ENST00000372330 PTPN12Q05209 780 aaKnown RBP20.81■□□□□ 0.92
MMP9-201ENST00000372330 SF3B2Q13435 895 aaKnown RBP20.81■□□□□ 0.92
MMP9-201ENST00000372330 PANX2Q96RD6 677 aa20.81■□□□□ 0.92
MMP9-201ENST00000372330 MRPL44Q9H9J2 332 aaKnown RBP20.81■□□□□ 0.92
MMP9-201ENST00000372330 A6NNZ2 444 aa20.8■□□□□ 0.92
MMP9-201ENST00000372330 CTDNEP1O95476 244 aa20.8■□□□□ 0.92
MMP9-201ENST00000372330 CCT5P48643 541 aa20.8■□□□□ 0.92
MMP9-201ENST00000372330 TUBB8Q3ZCM7 444 aa20.8■□□□□ 0.92
MMP9-201ENST00000372330 FBXW10Q5XX13 1052 aa20.8■□□□□ 0.92
MMP9-201ENST00000372330 UBE3BQ7Z3V4 1068 aa20.8■□□□□ 0.92
MMP9-201ENST00000372330 IGSF22Q8N9C0 903 aa20.8■□□□□ 0.92
MMP9-201ENST00000372330 FANCLQ9NW38 375 aa20.8■□□□□ 0.92
MMP9-201ENST00000372330 U3KPZ7 1027 aaPredicted RBP20.8■□□□□ 0.92
MMP9-201ENST00000372330 SALL1Q9NSC2 1324 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms