RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 KCNB2Q92953 911 aa18.89■□□□□ 0.61
TMEM53-204ENST00000372243 ARPP21Q9UBL0 812 aaPredicted RBP18.89■□□□□ 0.61
TMEM53-204ENST00000372243 LAMA4Q16363 1823 aa18.88■□□□□ 0.61
TMEM53-204ENST00000372243 COL2A1P02458 1487 aaPredicted RBP18.88■□□□□ 0.61
TMEM53-204ENST00000372243 BAZ2AQ9UIF9 1905 aaKnown RBP18.88■□□□□ 0.61
TMEM53-204ENST00000372243 IMMTQ16891 758 aaKnown RBP18.88■□□□□ 0.61
TMEM53-204ENST00000372243 CREB3L3Q68CJ9 461 aa18.88■□□□□ 0.61
TMEM53-204ENST00000372243 MAPKAPK5Q8IW41 473 aa18.88■□□□□ 0.61
TMEM53-204ENST00000372243 TBC1D32Q96NH3 1257 aa18.88■□□□□ 0.61
TMEM53-204ENST00000372243 DDX4Q9NQI0 724 aaKnown RBP18.88■□□□□ 0.61
TMEM53-204ENST00000372243 ANAPC15P60006 121 aa18.87■□□□□ 0.61
TMEM53-204ENST00000372243 NFIAQ12857 509 aa18.87■□□□□ 0.61
TMEM53-204ENST00000372243 TSGA10IPQ3SY00 556 aa18.87■□□□□ 0.61
TMEM53-204ENST00000372243 CTR9Q6PD62 1173 aa18.87■□□□□ 0.61
TMEM53-204ENST00000372243 USP50Q70EL3 339 aaPredicted RBP18.87■□□□□ 0.61
TMEM53-204ENST00000372243 TRPM4Q8TD43 1214 aa18.87■□□□□ 0.61
TMEM53-204ENST00000372243 IL17RAQ96F46 866 aa18.87■□□□□ 0.61
TMEM53-204ENST00000372243 OSBPL5Q9H0X9 879 aaPredicted RBP18.87■□□□□ 0.61
TMEM53-204ENST00000372243 MCM9Q9NXL9 1143 aa18.87■□□□□ 0.61
TMEM53-204ENST00000372243 FAM198AQ9UFP1 575 aa18.87■□□□□ 0.61
TMEM53-204ENST00000372243 MYH1P12882 1939 aa18.87■□□□□ 0.61
TMEM53-204ENST00000372243 LAMB1P07942 1786 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 CLRN2A0PK11 232 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 USP17L12C9JPN9 530 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 USP17L21D6R901 530 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 ZNF213O14771 459 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 SLC27A2O14975 620 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 CYP21A2P08686 494 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-204ENST00000372243 PICALMQ13492 652 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 FAM83AQ86UY5 434 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 AMOTL1Q8IY63 956 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 ANAPC4Q9UJX5 808 aa18.86■□□□□ 0.61
TMEM53-204ENST00000372243 POTECB2RU33 542 aa18.85■□□□□ 0.61
TMEM53-204ENST00000372243 EPHX2P34913 555 aa18.85■□□□□ 0.61
TMEM53-204ENST00000372243 HIRAP54198 1017 aaPredicted RBP18.85■□□□□ 0.61
TMEM53-204ENST00000372243 CACNB3P54284 484 aa18.85■□□□□ 0.61
TMEM53-204ENST00000372243 TNFAIP1Q13829 316 aa18.85■□□□□ 0.61
TMEM53-204ENST00000372243 DHX36Q9H2U1 1008 aaKnown RBP18.85■□□□□ 0.61
TMEM53-204ENST00000372243 TNNI2P48788 182 aa18.85■□□□□ 0.61
TMEM53-204ENST00000372243 C12orf60Q5U649 245 aa18.85■□□□□ 0.61
TMEM53-204ENST00000372243 FAM151AQ8WW52 585 aa18.85■□□□□ 0.61
TMEM53-204ENST00000372243 PITPNM2Q9BZ72 1349 aa18.84■□□□□ 0.61
TMEM53-204ENST00000372243 ATRNL1Q5VV63 1379 aa18.84■□□□□ 0.61
TMEM53-204ENST00000372243 PPARAQ07869 468 aa18.84■□□□□ 0.61
TMEM53-204ENST00000372243 TTC6Q86TZ1 520 aa18.84■□□□□ 0.61
TMEM53-204ENST00000372243 PNMA8AQ86V59 439 aaPredicted RBP18.84■□□□□ 0.61
TMEM53-204ENST00000372243 ZC3H15Q8WU90 426 aaKnown RBP18.84■□□□□ 0.61
TMEM53-204ENST00000372243 TAF1DQ9H5J8 278 aaPredicted RBP18.84■□□□□ 0.61
TMEM53-204ENST00000372243 VEZTQ9HBM0 779 aa18.84■□□□□ 0.61
TMEM53-204ENST00000372243 TAOK2Q9UL54 1235 aa18.84■□□□□ 0.61
TMEM53-204ENST00000372243 PALD1Q9ULE6 856 aa18.84■□□□□ 0.61
TMEM53-204ENST00000372243 CNTNAP1P78357 1384 aa18.83■□□□□ 0.61
TMEM53-204ENST00000372243 TCP10L2B9ZVM9 353 aa18.83■□□□□ 0.6
TMEM53-204ENST00000372243 POLR3DP05423 398 aaPredicted RBP18.83■□□□□ 0.6
TMEM53-204ENST00000372243 KRT32Q14532 448 aa18.83■□□□□ 0.6
TMEM53-204ENST00000372243 APOBEC3FQ8IUX4 373 aaKnown RBP18.83■□□□□ 0.6
TMEM53-204ENST00000372243 RASEFQ8IZ41 740 aa18.83■□□□□ 0.6
TMEM53-204ENST00000372243 SNX14Q9Y5W7 946 aa18.83■□□□□ 0.6
TMEM53-204ENST00000372243 ROBO3Q96MS0 1386 aa18.83■□□□□ 0.6
TMEM53-204ENST00000372243 MINDY4BA8MYZ0 360 aa18.82■□□□□ 0.6
TMEM53-204ENST00000372243 PCP11498 1178 aaKnown RBP18.82■□□□□ 0.6
TMEM53-204ENST00000372243 TCP10Q12799 353 aa18.82■□□□□ 0.6
TMEM53-204ENST00000372243 ANGEL2Q5VTE6 544 aaKnown RBP18.82■□□□□ 0.6
TMEM53-204ENST00000372243 PGAP2Q9UHJ9 254 aa18.82■□□□□ 0.6
TMEM53-204ENST00000372243 SAP30BPQ9UHR5 308 aaKnown RBP18.82■□□□□ 0.6
TMEM53-204ENST00000372243 SLC3A2P08195 630 aaKnown RBP18.81■□□□□ 0.6
TMEM53-204ENST00000372243 VEGFAP15692 232 aaPredicted RBP18.81■□□□□ 0.6
TMEM53-204ENST00000372243 HAND2P61296 217 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 ZFPM1Q8IX07 1006 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 NBPF3Q9H094 633 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 EHD4Q9H223 541 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 GGA3Q9NZ52 723 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 ASTN2O75129 1339 aaPredicted RBP18.81■□□□□ 0.6
TMEM53-204ENST00000372243 HLA-DOAP06340 250 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 FGRP09769 529 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 PLCD1P51178 756 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 STAG1Q8WVM7 1258 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 RNF41Q9H4P4 317 aaPredicted RBP18.81■□□□□ 0.6
TMEM53-204ENST00000372243 PI4KBQ9UBF8 816 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 PPP2R3BQ9Y5P8 575 aa18.81■□□□□ 0.6
TMEM53-204ENST00000372243 CYP2D7A0A087X1C5 515 aa18.8■□□□□ 0.6
TMEM53-204ENST00000372243 DDTLA6NHG4 134 aaPredicted RBP18.8■□□□□ 0.6
TMEM53-204ENST00000372243 E7EWF7 191 aa18.8■□□□□ 0.6
TMEM53-204ENST00000372243 CYP2D6P10635 497 aa18.8■□□□□ 0.6
TMEM53-204ENST00000372243 NT5C2P49902 561 aa18.8■□□□□ 0.6
TMEM53-204ENST00000372243 RASA3Q14644 834 aa18.8■□□□□ 0.6
TMEM53-204ENST00000372243 AKNAD1Q5T1N1 836 aa18.8■□□□□ 0.6
TMEM53-204ENST00000372243 SH3BP5LQ7L8J4 393 aa18.8■□□□□ 0.6
TMEM53-204ENST00000372243 KIF2CQ99661 725 aa18.8■□□□□ 0.6
TMEM53-204ENST00000372243 TM6SF1Q9BZW5 370 aa18.8■□□□□ 0.6
TMEM53-204ENST00000372243 TAF6LQ9Y6J9 622 aa18.8■□□□□ 0.6
TMEM53-204ENST00000372243 CTDSPL2Q05D32 466 aa18.79■□□□□ 0.6
TMEM53-204ENST00000372243 METTL16Q86W50 562 aaKnown RBP18.79■□□□□ 0.6
TMEM53-204ENST00000372243 TBC1D10CQ8IV04 446 aa18.79■□□□□ 0.6
TMEM53-204ENST00000372243 FOXP4Q8IVH2 680 aaPredicted RBP18.79■□□□□ 0.6
TMEM53-204ENST00000372243 ZSCAN29Q8IWY8 852 aaPredicted RBP18.79■□□□□ 0.6
TMEM53-204ENST00000372243 IL27Q8NEV9 243 aa18.79■□□□□ 0.6
TMEM53-204ENST00000372243 DCPSQ96C86 337 aaKnown RBP18.79■□□□□ 0.6
TMEM53-204ENST00000372243 RRAGCQ9HB90 399 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms