RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 CIAPIN1Q6FI81 312 aa21.81■■□□□ 1.08
VEGFA-206ENST00000372077 ZDHHC15Q96MV8 337 aa21.81■■□□□ 1.08
VEGFA-206ENST00000372077 GBP4Q96PP9 640 aa21.81■■□□□ 1.08
VEGFA-206ENST00000372077 NBPF3Q9H094 633 aa21.81■■□□□ 1.08
VEGFA-206ENST00000372077 FZD9O00144 591 aa21.81■■□□□ 1.08
VEGFA-206ENST00000372077 AGBL3Q8NEM8 1001 aa21.81■■□□□ 1.08
VEGFA-206ENST00000372077 ST18O60284 1047 aa21.8■■□□□ 1.08
VEGFA-206ENST00000372077 APOBEC3HQ6NTF7 200 aaKnown RBP21.8■■□□□ 1.08
VEGFA-206ENST00000372077 RUFY3Q7L099 469 aa21.8■■□□□ 1.08
VEGFA-206ENST00000372077 TTC14Q96N46 770 aa21.8■■□□□ 1.08
VEGFA-206ENST00000372077 NEK1Q96PY6 1258 aa21.8■■□□□ 1.08
VEGFA-206ENST00000372077 RBM27Q9P2N5 1060 aaKnown RBP21.8■■□□□ 1.08
VEGFA-206ENST00000372077 YBX3P16989 372 aaKnown RBP eCLIP21.8■■□□□ 1.082e-6■■□□□ 13.8
VEGFA-206ENST00000372077 ADAMTSL1Q8N6G6 1762 aa21.8■■□□□ 1.08
VEGFA-206ENST00000372077 ANAPC4Q9UJX5 808 aa21.79■■□□□ 1.08
VEGFA-206ENST00000372077 CYP46A1Q9Y6A2 500 aa21.79■■□□□ 1.08
VEGFA-206ENST00000372077 COL9A3Q14050 684 aaPredicted RBP21.79■■□□□ 1.08
VEGFA-206ENST00000372077 TNIP1Q15025 636 aa21.79■■□□□ 1.08
VEGFA-206ENST00000372077 CDK5RAP2Q96SN8 1893 aa21.79■■□□□ 1.08
VEGFA-206ENST00000372077 SBK1Q52WX2 424 aa21.79■■□□□ 1.08
VEGFA-206ENST00000372077 CAVIN1Q6NZI2 390 aaKnown RBP21.79■■□□□ 1.08
VEGFA-206ENST00000372077 BLOC1S2Q6QNY1 142 aa21.79■■□□□ 1.08
VEGFA-206ENST00000372077 TEX11Q8IYF3 940 aa21.79■■□□□ 1.08
VEGFA-206ENST00000372077 CPA1P15085 419 aa21.78■■□□□ 1.08
VEGFA-206ENST00000372077 LMNB1P20700 586 aa21.78■■□□□ 1.08
VEGFA-206ENST00000372077 CTR9Q6PD62 1173 aa21.78■■□□□ 1.08
VEGFA-206ENST00000372077 ZBTB12Q9Y330 459 aaPredicted RBP21.78■■□□□ 1.08
VEGFA-206ENST00000372077 TIAM2Q8IVF5 1701 aa21.78■■□□□ 1.08
VEGFA-206ENST00000372077 RPS6KB1P23443 525 aa21.78■■□□□ 1.08
VEGFA-206ENST00000372077 USP5P45974 858 aa21.78■■□□□ 1.08
VEGFA-206ENST00000372077 TBC1D10CQ8IV04 446 aa21.78■■□□□ 1.08
VEGFA-206ENST00000372077 TGFBRAP1Q8WUH2 860 aa21.78■■□□□ 1.08
VEGFA-206ENST00000372077 DICER1Q9UPY3 1922 aaKnown RBP21.77■■□□□ 1.08
VEGFA-206ENST00000372077 BAG4O95429 457 aaKnown RBP21.77■■□□□ 1.08
VEGFA-206ENST00000372077 PPARAQ07869 468 aa21.77■■□□□ 1.08
VEGFA-206ENST00000372077 ZMYND15Q9H091 742 aa21.77■■□□□ 1.08
VEGFA-206ENST00000372077 BAZ2AQ9UIF9 1905 aaKnown RBP21.77■■□□□ 1.08
VEGFA-206ENST00000372077 SBF1O95248 1867 aa21.77■■□□□ 1.08
VEGFA-206ENST00000372077 HMGB1P09429 215 aaKnown RBP21.77■■□□□ 1.08
VEGFA-206ENST00000372077 ALDH8A1Q9H2A2 487 aaPredicted RBP21.77■■□□□ 1.08
VEGFA-206ENST00000372077 USP17L12C9JPN9 530 aa21.76■■□□□ 1.07
VEGFA-206ENST00000372077 USP17L21D6R901 530 aa21.76■■□□□ 1.07
VEGFA-206ENST00000372077 CDC42EP5Q6NZY7 148 aa21.76■■□□□ 1.07
VEGFA-206ENST00000372077 USP40Q9NVE5 1235 aa21.76■■□□□ 1.07
VEGFA-206ENST00000372077 ARPP21Q9UBL0 812 aaPredicted RBP21.76■■□□□ 1.07
VEGFA-206ENST00000372077 FOCADQ5VW36 1801 aa21.76■■□□□ 1.07
VEGFA-206ENST00000372077 PRPF40AO75400 957 aaKnown RBP21.76■■□□□ 1.07
VEGFA-206ENST00000372077 MCM2P49736 904 aa21.76■■□□□ 1.07
VEGFA-206ENST00000372077 EIF6P56537 245 aaKnown RBP21.76■■□□□ 1.07
VEGFA-206ENST00000372077 PDRG1Q9NUG6 133 aa21.76■■□□□ 1.07
VEGFA-206ENST00000372077 HDAC9Q9UKV0 1011 aa21.76■■□□□ 1.07
VEGFA-206ENST00000372077 PCDHAC2Q9Y5I4 1007 aa21.76■■□□□ 1.07
VEGFA-206ENST00000372077 GOLGB1Q14789 3259 aaKnown RBP21.76■■□□□ 1.07
VEGFA-206ENST00000372077 CTDSPL2Q05D32 466 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 GLIPR1L2Q4G1C9 344 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 STAG1Q8WVM7 1258 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 TACC3Q9Y6A5 838 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 CFAP100Q494V2 611 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 MINDY4BA8MYZ0 360 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 RPS12P25398 132 aaKnown RBP21.75■■□□□ 1.07
VEGFA-206ENST00000372077 MRE11P49959 708 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 MMP14P50281 582 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 EXOSC10Q01780 885 aaKnown RBP21.75■■□□□ 1.07
VEGFA-206ENST00000372077 AKNAD1Q5T1N1 836 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 DHX32Q7L7V1 743 aaKnown RBP21.75■■□□□ 1.07
VEGFA-206ENST00000372077 NCOA7Q8NI08 942 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 MCM9Q9NXL9 1143 aa21.75■■□□□ 1.07
VEGFA-206ENST00000372077 NAV1Q8NEY1 1877 aa21.74■■□□□ 1.07
VEGFA-206ENST00000372077 FLT1P17948 1338 aa21.74■■□□□ 1.07
VEGFA-206ENST00000372077 WDHD1O75717 1129 aaPredicted RBP21.74■■□□□ 1.07
VEGFA-206ENST00000372077 USP17L8P0C7I0 530 aa21.74■■□□□ 1.07
VEGFA-206ENST00000372077 MAPKAPK5Q8IW41 473 aa21.74■■□□□ 1.07
VEGFA-206ENST00000372077 DDX60LQ5H9U9 1706 aaKnown RBP21.74■■□□□ 1.07
VEGFA-206ENST00000372077 RBM5P52756 815 aaKnown RBP eCLIP21.74■■□□□ 1.071e-9■□□□□ 9.1
VEGFA-206ENST00000372077 MB21D2Q8IYB1 491 aaPredicted RBP21.74■■□□□ 1.07
VEGFA-206ENST00000372077 OGFOD1Q8N543 542 aa21.74■■□□□ 1.07
VEGFA-206ENST00000372077 LAMB1P07942 1786 aa21.73■■□□□ 1.07
VEGFA-206ENST00000372077 CYP2D7A0A087X1C5 515 aa21.73■■□□□ 1.07
VEGFA-206ENST00000372077 AK2P54819 239 aa21.73■■□□□ 1.07
VEGFA-206ENST00000372077 C12orf60Q5U649 245 aa21.73■■□□□ 1.07
VEGFA-206ENST00000372077 MTMR14Q8NCE2 650 aa21.73■■□□□ 1.07
VEGFA-206ENST00000372077 ECM29Q5VYK3 1845 aa21.73■■□□□ 1.07
VEGFA-206ENST00000372077 FGRP09769 529 aa21.73■■□□□ 1.07
VEGFA-206ENST00000372077 SMIM22K7EJ46 135 aa21.72■■□□□ 1.07
VEGFA-206ENST00000372077 PRMT6Q96LA8 375 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-206ENST00000372077 RNF41Q9H4P4 317 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-206ENST00000372077 GDPD2Q9HCC8 539 aa21.72■■□□□ 1.07
VEGFA-206ENST00000372077 MFSD6Q6ZSS7 791 aa21.72■■□□□ 1.07
VEGFA-206ENST00000372077 DPF2Q92785 391 aa21.72■■□□□ 1.07
VEGFA-206ENST00000372077 NEDD4P46934 1319 aa21.71■■□□□ 1.07
VEGFA-206ENST00000372077 ZNF541Q9H0D2 1346 aa21.71■■□□□ 1.07
VEGFA-206ENST00000372077 CYP2D6P10635 497 aa21.71■■□□□ 1.07
VEGFA-206ENST00000372077 TRDNQ13061 729 aa21.71■■□□□ 1.07
VEGFA-206ENST00000372077 IDI2Q9BXS1 227 aa21.71■■□□□ 1.07
VEGFA-206ENST00000372077 CNNM2Q9H8M5 875 aa21.71■■□□□ 1.07
VEGFA-206ENST00000372077 DDX4Q9NQI0 724 aaKnown RBP21.71■■□□□ 1.07
VEGFA-206ENST00000372077 INCENPQ9NQS7 918 aa21.71■■□□□ 1.07
VEGFA-206ENST00000372077 PCP11498 1178 aaKnown RBP21.71■■□□□ 1.07
VEGFA-206ENST00000372077 RALYLQ86SE5 291 aaKnown RBP21.71■■□□□ 1.07
VEGFA-206ENST00000372077 TRIM44Q96DX7 344 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms