RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 ATP8A2Q9NTI2 1148 aa21.52■■□□□ 1.04
CCDC17-201ENST00000372044 SUGT1Q9Y2Z0 365 aa21.52■■□□□ 1.04
CCDC17-201ENST00000372044 TCHHQ07283 1943 aa21.52■■□□□ 1.04
CCDC17-201ENST00000372044 BAG3O95817 575 aa21.52■■□□□ 1.03
CCDC17-201ENST00000372044 USP17L8P0C7I0 530 aa21.52■■□□□ 1.03
CCDC17-201ENST00000372044 MCM5P33992 734 aa21.52■■□□□ 1.03
CCDC17-201ENST00000372044 TGFBRAP1Q8WUH2 860 aa21.52■■□□□ 1.03
CCDC17-201ENST00000372044 ANAPC4Q9UJX5 808 aa21.52■■□□□ 1.03
CCDC17-201ENST00000372044 USP17L3A6NCW0 530 aa21.51■■□□□ 1.03
CCDC17-201ENST00000372044 USP17L4A6NCW7 530 aa21.51■■□□□ 1.03
CCDC17-201ENST00000372044 FGD1P98174 961 aa21.51■■□□□ 1.03
CCDC17-201ENST00000372044 TRDNQ13061 729 aa21.51■■□□□ 1.03
CCDC17-201ENST00000372044 GRIPAP1Q4V328 841 aa21.51■■□□□ 1.03
CCDC17-201ENST00000372044 USP17L1Q7RTZ2 530 aa21.51■■□□□ 1.03
CCDC17-201ENST00000372044 KIAA0825Q8IV33 1275 aa21.51■■□□□ 1.03
CCDC17-201ENST00000372044 CIZ1Q9ULV3 898 aaPredicted RBP21.51■■□□□ 1.03
CCDC17-201ENST00000372044 PCDHAC2Q9Y5I4 1007 aa21.51■■□□□ 1.03
CCDC17-201ENST00000372044 SOCS7O14512 581 aa21.5■■□□□ 1.03
CCDC17-201ENST00000372044 KDM4AO75164 1064 aa21.5■■□□□ 1.03
CCDC17-201ENST00000372044 RRP12Q5JTH9 1297 aaKnown RBP21.5■■□□□ 1.03
CCDC17-201ENST00000372044 MFSD6Q6ZSS7 791 aa21.5■■□□□ 1.03
CCDC17-201ENST00000372044 NOL10Q9BSC4 688 aaKnown RBP21.5■■□□□ 1.03
CCDC17-201ENST00000372044 USP5P45974 858 aa21.49■■□□□ 1.03
CCDC17-201ENST00000372044 MAPKAPK5Q8IW41 473 aa21.49■■□□□ 1.03
CCDC17-201ENST00000372044 SENP2Q9HC62 589 aa21.49■■□□□ 1.03
CCDC17-201ENST00000372044 MCM9Q9NXL9 1143 aa21.49■■□□□ 1.03
CCDC17-201ENST00000372044 ZSWIM5Q9P217 1185 aa21.49■■□□□ 1.03
CCDC17-201ENST00000372044 BCS1LQ9Y276 419 aa21.49■■□□□ 1.03
CCDC17-201ENST00000372044 LARGE2Q8N3Y3 721 aa21.49■■□□□ 1.03
CCDC17-201ENST00000372044 FBXL16Q8N461 479 aa21.49■■□□□ 1.03
CCDC17-201ENST00000372044 CWC22Q9HCG8 908 aaKnown RBP21.49■■□□□ 1.03
CCDC17-201ENST00000372044 NFKBIEO00221 500 aa21.48■■□□□ 1.03
CCDC17-201ENST00000372044 SLF2Q8IX21 1173 aa21.48■■□□□ 1.03
CCDC17-201ENST00000372044 TEX11Q8IYF3 940 aa21.48■■□□□ 1.03
CCDC17-201ENST00000372044 TOMM22Q9NS69 142 aa21.48■■□□□ 1.03
CCDC17-201ENST00000372044 BRPF3Q9ULD4 1205 aa21.48■■□□□ 1.03
CCDC17-201ENST00000372044 WDR19Q8NEZ3 1342 aa21.48■■□□□ 1.03
CCDC17-201ENST00000372044 PRDM1O75626 825 aa21.47■■□□□ 1.03
CCDC17-201ENST00000372044 FKBP1AP62942 108 aaKnown RBP21.47■■□□□ 1.03
CCDC17-201ENST00000372044 RAB3GAP1Q15042 981 aa21.47■■□□□ 1.03
CCDC17-201ENST00000372044 SOGA3Q5TF21 947 aa21.47■■□□□ 1.03
CCDC17-201ENST00000372044 GTF3C6Q969F1 213 aa21.47■■□□□ 1.03
CCDC17-201ENST00000372044 ARPP21Q9UBL0 812 aaPredicted RBP21.47■■□□□ 1.03
CCDC17-201ENST00000372044 ZDHHC9Q9Y397 364 aa21.47■■□□□ 1.03
CCDC17-201ENST00000372044 SCRN1Q12765 414 aa21.47■■□□□ 1.03
CCDC17-201ENST00000372044 SBK1Q52WX2 424 aa21.47■■□□□ 1.03
CCDC17-201ENST00000372044 ZKSCAN3Q9BRR0 538 aa21.47■■□□□ 1.03
CCDC17-201ENST00000372044 SAP30BPQ9UHR5 308 aaKnown RBP21.47■■□□□ 1.03
CCDC17-201ENST00000372044 SIPA1L1O43166 1804 aa21.46■■□□□ 1.03
CCDC17-201ENST00000372044 FLT1P17948 1338 aa21.46■■□□□ 1.03
CCDC17-201ENST00000372044 RAD17O75943 681 aa21.46■■□□□ 1.03
CCDC17-201ENST00000372044 IARSP41252 1262 aaKnown RBP21.46■■□□□ 1.03
CCDC17-201ENST00000372044 CRKP46108 304 aa21.46■■□□□ 1.03
CCDC17-201ENST00000372044 NBR1Q14596 966 aa21.46■■□□□ 1.03
CCDC17-201ENST00000372044 NFKBIBQ15653 356 aa21.46■■□□□ 1.03
CCDC17-201ENST00000372044 RAB11FIP4Q86YS3 637 aa21.46■■□□□ 1.03
CCDC17-201ENST00000372044 IGDCC4Q8TDY8 1250 aa21.46■■□□□ 1.03
CCDC17-201ENST00000372044 KRT23Q9C075 422 aa21.46■■□□□ 1.03
CCDC17-201ENST00000372044 CNNM2Q9H8M5 875 aa21.46■■□□□ 1.03
CCDC17-201ENST00000372044 SH2B2O14492 632 aaPredicted RBP21.45■■□□□ 1.02
CCDC17-201ENST00000372044 FGRP09769 529 aa21.45■■□□□ 1.02
CCDC17-201ENST00000372044 PDIA3P30101 505 aaKnown RBP21.45■■□□□ 1.02
CCDC17-201ENST00000372044 EVCP57679 992 aa21.45■■□□□ 1.02
CCDC17-201ENST00000372044 APOBEC3HQ6NTF7 200 aaKnown RBP21.45■■□□□ 1.02
CCDC17-201ENST00000372044 HHIPL2Q6UWX4 724 aa21.45■■□□□ 1.02
CCDC17-201ENST00000372044 TNPO1Q92973 898 aaKnown RBP21.45■■□□□ 1.02
CCDC17-201ENST00000372044 TEKT1Q969V4 418 aa21.45■■□□□ 1.02
CCDC17-201ENST00000372044 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.45■■□□□ 1.02
CCDC17-201ENST00000372044 SBF1O95248 1867 aa21.45■■□□□ 1.02
CCDC17-201ENST00000372044 PFKFB2O60825 505 aa21.45■■□□□ 1.02
CCDC17-201ENST00000372044 PLCD1P51178 756 aa21.45■■□□□ 1.02
CCDC17-201ENST00000372044 CCT2P78371 535 aaKnown RBP21.45■■□□□ 1.02
CCDC17-201ENST00000372044 C12orf60Q5U649 245 aa21.45■■□□□ 1.02
CCDC17-201ENST00000372044 TAOK3Q9H2K8 898 aa21.45■■□□□ 1.02
CCDC17-201ENST00000372044 RNF41Q9H4P4 317 aaPredicted RBP21.45■■□□□ 1.02
CCDC17-201ENST00000372044 SPON1Q9HCB6 807 aa21.45■■□□□ 1.02
CCDC17-201ENST00000372044 NCOA5Q9HCD5 579 aaKnown RBP21.45■■□□□ 1.02
CCDC17-201ENST00000372044 NAP1L2Q9ULW6 460 aaPredicted RBP21.45■■□□□ 1.02
CCDC17-201ENST00000372044 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.45■■□□□ 1.02
CCDC17-201ENST00000372044 PSMD14O00487 310 aa21.44■■□□□ 1.02
CCDC17-201ENST00000372044 PLCG2P16885 1265 aa21.44■■□□□ 1.02
CCDC17-201ENST00000372044 GJB2P29033 226 aa21.44■■□□□ 1.02
CCDC17-201ENST00000372044 DYNLL2Q96FJ2 89 aa21.44■■□□□ 1.02
CCDC17-201ENST00000372044 LY9Q9HBG7 655 aa21.44■■□□□ 1.02
CCDC17-201ENST00000372044 DDX4Q9NQI0 724 aaKnown RBP21.44■■□□□ 1.02
CCDC17-201ENST00000372044 ANGEL1Q9UNK9 670 aaKnown RBP21.44■■□□□ 1.02
CCDC17-201ENST00000372044 SMC3Q9UQE7 1217 aa21.44■■□□□ 1.02
CCDC17-201ENST00000372044 MYH6P13533 1939 aa21.44■■□□□ 1.02
CCDC17-201ENST00000372044 DICER1Q9UPY3 1922 aaKnown RBP21.44■■□□□ 1.02
CCDC17-201ENST00000372044 KLF18A0A0U1RQI7 1052 aa21.43■■□□□ 1.02
CCDC17-201ENST00000372044 WDHD1O75717 1129 aaPredicted RBP21.43■■□□□ 1.02
CCDC17-201ENST00000372044 PRELPP51888 382 aa21.43■■□□□ 1.02
CCDC17-201ENST00000372044 CDC42EP5Q6NZY7 148 aa21.43■■□□□ 1.02
CCDC17-201ENST00000372044 HPS5Q9UPZ3 1129 aa21.43■■□□□ 1.02
CCDC17-201ENST00000372044 JAK2O60674 1132 aa21.43■■□□□ 1.02
CCDC17-201ENST00000372044 RASSF7Q02833 373 aa21.43■■□□□ 1.02
CCDC17-201ENST00000372044 CERS3Q8IU89 383 aa21.43■■□□□ 1.02
CCDC17-201ENST00000372044 ZNF274Q96GC6 653 aaPredicted RBP21.43■■□□□ 1.02
CCDC17-201ENST00000372044 CTDNEP1O95476 244 aa21.42■■□□□ 1.02
CCDC17-201ENST00000372044 PICALMQ13492 652 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms