RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 SH2D3CQ8N5H7 860 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 ARL8AQ96BM9 186 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 CALR3Q96L12 384 aaKnown RBP10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 DDX20Q9UHI6 824 aaKnown RBP10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 ODF2LQ9ULJ1 636 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 PDIA3P30101 505 aaKnown RBP10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 NEDD9Q14511 834 aa10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 E2F5Q15329 346 aa10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 EZH2Q15910 746 aaKnown RBP10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 SPRED3Q2MJR0 410 aa10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 CWF19L2Q2TBE0 894 aaKnown RBP10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 HSP90AB3PQ58FF7 597 aa10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 CEP57Q86XR8 500 aa10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 COG1Q8WTW3 980 aa10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 VEZTQ9HBM0 779 aa10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.71□□□□□ -0.69
HMGCLL1-204ENST00000370852 ZNF185O15231 689 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 RPSAP08865 295 aaKnown RBP10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 ARHGAP25P42331 645 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 USP14P54578 494 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 AMPD2Q01433 879 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 PREPLQ4J6C6 727 aaPredicted RBP10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 MYSM1Q5VVJ2 828 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 USPL1Q5W0Q7 1092 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 SELENOOQ9BVL4 669 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 SNRKQ9NRH2 765 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 CHPF2Q9P2E5 772 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 MYO6Q9UM54 1294 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 AKR1B15C9JRZ8 316 aaPredicted RBP10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 PPP1R12BO60237 982 aaPredicted RBP10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 MAP2K1Q02750 393 aaPredicted RBP10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 DDR1Q08345 913 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 KCTD16Q68DU8 428 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 WDR93Q6P2C0 686 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 IQCA1Q86XH1 822 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 OTUD6BQ8N6M0 293 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 ZNF526Q8TF50 670 aaPredicted RBP10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 NAPGQ99747 312 aaPredicted RBP10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 ACBD3Q9H3P7 528 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 ZNF609O15014 1411 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 MYO5BQ9ULV0 1848 aa10.7□□□□□ -0.7
HMGCLL1-204ENST00000370852 KCNQ3O43525 872 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 ZEB2O60315 1214 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 CMA1P23946 247 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 CDC25CP30307 473 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 CASP14P31944 242 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 NF2P35240 595 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 USP8P40818 1118 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 FXR1P51114 621 aaKnown RBP eCLIP10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 STX17P56962 302 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 ERVK-24P63145 666 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 APBA1Q02410 837 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 SEMA3FQ13275 785 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 NR1I3Q14994 352 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 RNF187Q5TA31 235 aaPredicted RBP10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 SLC9C2Q5TAH2 1124 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 ANO1Q5XXA6 986 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 OLFM4Q6UX06 510 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 ARHGEF25Q86VW2 580 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 IL17REQ8NFR9 667 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 HDAC7Q8WUI4 952 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 GPATCH3Q96I76 525 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 KLC4Q9NSK0 619 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 HMG20BQ9P0W2 317 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 LAMA4Q16363 1823 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 LMTK2Q8IWU2 1503 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 NDUFAB1O14561 156 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 GCFC2P16383 781 aaKnown RBP10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 ZNF18P17022 549 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 GRIN1Q05586 938 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 C11orf91Q3C1V1 193 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 TTMPQ5BVD1 217 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 POTEDQ86YR6 584 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 KCNG4Q8TDN1 519 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 SLF1Q9BQI6 1058 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 LLPHQ9BRT6 129 aaKnown RBP10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 FAM107BQ9H098 131 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 GBP3Q9H0R5 595 aa10.69□□□□□ -0.7
HMGCLL1-204ENST00000370852 SHTN1A0MZ66 631 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 UBE2Q2LH0YL09 131 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 PDE2AO00408 941 aaPredicted RBP10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 OPLAHO14841 1288 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 RTN2O75298 545 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 ATP1A1P05023 1023 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 RDXP35241 583 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 SEC24CP53992 1094 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 SETQ01105 290 aaPredicted RBP10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 PPFIA1Q13136 1202 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 STAG1Q8WVM7 1258 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 CRACR2AQ9BSW2 395 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 VIPAS39Q9H9C1 493 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 A1CFQ9NQ94 594 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 MAN1B1Q9UKM7 699 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 GUCA1BQ9UMX6 200 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 EDC4Q6P2E9 1401 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 JCADQ9P266 1359 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 CHUKO15111 745 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 FSBPO95073 299 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 CASP1P29466 404 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 TRDNQ13061 729 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms