RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 NFIAQ12857 509 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 AAMPQ13685 434 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 RASGRF1Q13972 1273 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 CCL15Q16663 113 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 IDI2Q9BXS1 227 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 ZNF341Q9BYN7 854 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.22■□□□□ 0.51
LMO4-201ENST00000370542 TNNQ9UQP3 1299 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 AKAP2Q9Y2D5 859 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.22■□□□□ 0.51
LMO4-201ENST00000370542 ATRNL1Q5VV63 1379 aa18.21■□□□□ 0.51
LMO4-201ENST00000370542 IRF6O14896 467 aa18.21■□□□□ 0.51
LMO4-201ENST00000370542 SP3Q02447 781 aa18.21■□□□□ 0.51
LMO4-201ENST00000370542 MAP3K10Q02779 954 aa18.21■□□□□ 0.51
LMO4-201ENST00000370542 PPATQ06203 517 aa18.21■□□□□ 0.51
LMO4-201ENST00000370542 TFCP2Q12800 502 aa18.21■□□□□ 0.51
LMO4-201ENST00000370542 PPIL2Q13356 520 aa18.21■□□□□ 0.51
LMO4-201ENST00000370542 BECN1Q14457 450 aa18.21■□□□□ 0.51
LMO4-201ENST00000370542 FRAT1Q92837 279 aaPredicted RBP18.21■□□□□ 0.51
LMO4-201ENST00000370542 ZKSCAN4Q969J2 545 aaPredicted RBP18.21■□□□□ 0.51
LMO4-201ENST00000370542 XAGE2Q96GT9 111 aa18.21■□□□□ 0.51
LMO4-201ENST00000370542 MYH2Q9UKX2 1941 aa18.2■□□□□ 0.5
LMO4-201ENST00000370542 GNAI2P04899 355 aa18.2■□□□□ 0.5
LMO4-201ENST00000370542 NOL9Q5SY16 702 aaKnown RBP18.2■□□□□ 0.5
LMO4-201ENST00000370542 USP40Q9NVE5 1235 aa18.2■□□□□ 0.5
LMO4-201ENST00000370542 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
LMO4-201ENST00000370542 ENTPD3O75355 529 aa18.19■□□□□ 0.5
LMO4-201ENST00000370542 CETPP11597 493 aa18.19■□□□□ 0.5
LMO4-201ENST00000370542 INPP5BP32019 993 aa18.19■□□□□ 0.5
LMO4-201ENST00000370542 MVPQ14764 893 aaKnown RBP18.19■□□□□ 0.5
LMO4-201ENST00000370542 MIGA2Q7L4E1 593 aa18.19■□□□□ 0.5
LMO4-201ENST00000370542 CD99L2Q8TCZ2 262 aa18.19■□□□□ 0.5
LMO4-201ENST00000370542 ZFYVE28Q9HCC9 887 aa18.19■□□□□ 0.5
LMO4-201ENST00000370542 KCNH4Q9UQ05 1017 aa18.19■□□□□ 0.5
LMO4-201ENST00000370542 LAMA3Q16787 3333 aa18.18■□□□□ 0.5
LMO4-201ENST00000370542 SNAPC2Q13487 334 aa18.18■□□□□ 0.5
LMO4-201ENST00000370542 POLA2Q14181 598 aa18.18■□□□□ 0.5
LMO4-201ENST00000370542 TAF1CQ15572 869 aaPredicted RBP18.18■□□□□ 0.5
LMO4-201ENST00000370542 ZFPM1Q8IX07 1006 aa18.18■□□□□ 0.5
LMO4-201ENST00000370542 ZNF384Q8TF68 577 aa18.18■□□□□ 0.5
LMO4-201ENST00000370542 EFCC1Q9HA90 598 aa18.18■□□□□ 0.5
LMO4-201ENST00000370542 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
LMO4-201ENST00000370542 PHF20L1A8MW92 1017 aa18.17■□□□□ 0.5
LMO4-201ENST00000370542 BTBD19C9JJ37 291 aa18.17■□□□□ 0.5
LMO4-201ENST00000370542 TLR2O60603 784 aa18.17■□□□□ 0.5
LMO4-201ENST00000370542 NPM3O75607 178 aaKnown RBP18.17■□□□□ 0.5
LMO4-201ENST00000370542 ARID4AP29374 1257 aaPredicted RBP18.17■□□□□ 0.5
LMO4-201ENST00000370542 TCP10Q12799 353 aa18.17■□□□□ 0.5
LMO4-201ENST00000370542 MOGSQ13724 837 aa18.17■□□□□ 0.5
LMO4-201ENST00000370542 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
LMO4-201ENST00000370542 SPTY2D1Q68D10 685 aaPredicted RBP18.17■□□□□ 0.5
LMO4-201ENST00000370542 SLF2Q8IX21 1173 aa18.17■□□□□ 0.5
LMO4-201ENST00000370542 TMEM57Q8N5G2 664 aa18.17■□□□□ 0.5
LMO4-201ENST00000370542 UNC80Q8N2C7 3258 aa18.17■□□□□ 0.5
LMO4-201ENST00000370542 GPR75-ASB3A0A0A6YYF3 556 aa18.16■□□□□ 0.5
LMO4-201ENST00000370542 WDHD1O75717 1129 aaPredicted RBP18.16■□□□□ 0.5
LMO4-201ENST00000370542 SH3BP5LQ7L8J4 393 aa18.16■□□□□ 0.5
LMO4-201ENST00000370542 GPR108Q9NPR9 543 aa18.16■□□□□ 0.5
LMO4-201ENST00000370542 HMG20BQ9P0W2 317 aa18.16■□□□□ 0.5
LMO4-201ENST00000370542 BRPF3Q9ULD4 1205 aa18.16■□□□□ 0.5
LMO4-201ENST00000370542 MAP4K4O95819 1239 aaPredicted RBP18.15■□□□□ 0.5
LMO4-201ENST00000370542 RGS3P49796 1198 aa18.15■□□□□ 0.5
LMO4-201ENST00000370542 RHBDL3P58872 404 aa18.15■□□□□ 0.5
LMO4-201ENST00000370542 C8orf34Q49A92 452 aa18.15■□□□□ 0.5
LMO4-201ENST00000370542 SSH3Q8TE77 659 aa18.15■□□□□ 0.5
LMO4-201ENST00000370542 CLUAP1Q96AJ1 413 aa18.15■□□□□ 0.5
LMO4-201ENST00000370542 MROH7-TTC4A0A0A0MT08 1334 aa18.15■□□□□ 0.5
LMO4-201ENST00000370542 AK9Q5TCS8 1911 aa18.14■□□□□ 0.49
LMO4-201ENST00000370542 ATP8B2P98198 1209 aa18.14■□□□□ 0.49
LMO4-201ENST00000370542 MECOMQ03112 1051 aa18.14■□□□□ 0.49
LMO4-201ENST00000370542 G3BP1Q13283 466 aaKnown RBP eCLIP18.14■□□□□ 0.49
LMO4-201ENST00000370542 ARHGEF6Q15052 776 aa18.14■□□□□ 0.49
LMO4-201ENST00000370542 ANKRD23Q86SG2 305 aa18.14■□□□□ 0.49
LMO4-201ENST00000370542 NBPF11Q86T75 865 aa18.14■□□□□ 0.49
LMO4-201ENST00000370542 DZIP1Q86YF9 867 aaKnown RBP18.14■□□□□ 0.49
LMO4-201ENST00000370542 DDX4Q9NQI0 724 aaKnown RBP18.14■□□□□ 0.49
LMO4-201ENST00000370542 ABCF2Q9UG63 623 aa18.14■□□□□ 0.49
LMO4-201ENST00000370542 SOX1O00570 391 aaPredicted RBP18.13■□□□□ 0.49
LMO4-201ENST00000370542 SLC4A8Q2Y0W8 1093 aa18.13■□□□□ 0.49
LMO4-201ENST00000370542 GLIPR1L2Q4G1C9 344 aa18.13■□□□□ 0.49
LMO4-201ENST00000370542 C17orf99Q6UX52 265 aa18.13■□□□□ 0.49
LMO4-201ENST00000370542 SPATA5Q8NB90 893 aa18.13■□□□□ 0.49
LMO4-201ENST00000370542 NSUN4Q96CB9 384 aaKnown RBP18.13■□□□□ 0.49
LMO4-201ENST00000370542 NEUROD6Q96NK8 337 aa18.13■□□□□ 0.49
LMO4-201ENST00000370542 ADGRA2Q96PE1 1338 aa18.13■□□□□ 0.49
LMO4-201ENST00000370542 DOCK2Q92608 1830 aa18.12■□□□□ 0.49
LMO4-201ENST00000370542 A0A1W2PPC1 479 aa18.12■□□□□ 0.49
LMO4-201ENST00000370542 DDTLA6NHG4 134 aaPredicted RBP18.12■□□□□ 0.49
LMO4-201ENST00000370542 CXCL11O14625 94 aa18.12■□□□□ 0.49
LMO4-201ENST00000370542 ZBTB7BO15156 539 aaPredicted RBP18.12■□□□□ 0.49
LMO4-201ENST00000370542 TBC1D12O60347 775 aa18.12■□□□□ 0.49
LMO4-201ENST00000370542 MCAMP43121 646 aa18.12■□□□□ 0.49
LMO4-201ENST00000370542 BTDP43251 543 aa18.12■□□□□ 0.49
LMO4-201ENST00000370542 COL25A1Q9BXS0 654 aaPredicted RBP18.12■□□□□ 0.49
LMO4-201ENST00000370542 IGSF3O75054 1194 aa18.11■□□□□ 0.49
LMO4-201ENST00000370542 GNRH1P01148 92 aa18.11■□□□□ 0.49
LMO4-201ENST00000370542 LACTBP83111 547 aaPredicted RBP18.11■□□□□ 0.49
LMO4-201ENST00000370542 SLC9C1Q4G0N8 1177 aa18.11■□□□□ 0.49
LMO4-201ENST00000370542 PI16Q6UXB8 463 aa18.11■□□□□ 0.49
LMO4-201ENST00000370542 SCYL3Q8IZE3 742 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms