RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TRIM6-TRIM34B2RNG4 842 aa17.91■□□□□ 0.46
COL9A1-204ENST00000370496 PDE4AP27815 886 aa17.91■□□□□ 0.46
COL9A1-204ENST00000370496 UBE3CQ15386 1083 aa17.91■□□□□ 0.46
COL9A1-204ENST00000370496 EVI5LQ96CN4 794 aa17.91■□□□□ 0.46
COL9A1-204ENST00000370496 ANGEL1Q9UNK9 670 aaKnown RBP17.91■□□□□ 0.46
COL9A1-204ENST00000370496 FLT1P17948 1338 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 RASSF10A6NK89 507 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 MBD4O95243 580 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 ZFYP08048 801 aaPredicted RBP17.9■□□□□ 0.46
COL9A1-204ENST00000370496 USP5P45974 858 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 GRM1Q13255 1194 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 MOB2Q70IA6 237 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 MAPKAPK5Q8IW41 473 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 TGFBRAP1Q8WUH2 860 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 CSRNP1Q96S65 589 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 CRNKL1Q9BZJ0 848 aaKnown RBP17.9■□□□□ 0.46
COL9A1-204ENST00000370496 OSBPL5Q9H0X9 879 aaPredicted RBP17.9■□□□□ 0.46
COL9A1-204ENST00000370496 OSBPL3Q9H4L5 887 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 FZD1Q9UP38 647 aa17.9■□□□□ 0.46
COL9A1-204ENST00000370496 RNF113AO15541 343 aaKnown RBP17.89■□□□□ 0.45
COL9A1-204ENST00000370496 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
COL9A1-204ENST00000370496 CHGBP05060 677 aa17.89■□□□□ 0.45
COL9A1-204ENST00000370496 IREB2P48200 963 aaKnown RBP17.89■□□□□ 0.45
COL9A1-204ENST00000370496 DEFB115Q30KQ5 88 aa17.89■□□□□ 0.45
COL9A1-204ENST00000370496 ERICH6BQ5W0A0 696 aa17.89■□□□□ 0.45
COL9A1-204ENST00000370496 DCAF15Q66K64 600 aa17.89■□□□□ 0.45
COL9A1-204ENST00000370496 LCORLQ8N3X6 602 aa17.89■□□□□ 0.45
COL9A1-204ENST00000370496 AIDAQ96BJ3 306 aa17.89■□□□□ 0.45
COL9A1-204ENST00000370496 RIOK1Q9BRS2 568 aaKnown RBP17.89■□□□□ 0.45
COL9A1-204ENST00000370496 ATRNL1Q5VV63 1379 aa17.88■□□□□ 0.45
COL9A1-204ENST00000370496 THSD7BQ9C0I4 1608 aa17.88■□□□□ 0.45
COL9A1-204ENST00000370496 ZFPM1Q8IX07 1006 aa17.88■□□□□ 0.45
COL9A1-204ENST00000370496 APPBP2Q92624 585 aa17.88■□□□□ 0.45
COL9A1-204ENST00000370496 RILPL2Q969X0 211 aa17.88■□□□□ 0.45
COL9A1-204ENST00000370496 ARMT1Q9H993 441 aa17.88■□□□□ 0.45
COL9A1-204ENST00000370496 SIPA1L1O43166 1804 aa17.87■□□□□ 0.45
COL9A1-204ENST00000370496 UBE2Q2LH0YL09 131 aa17.87■□□□□ 0.45
COL9A1-204ENST00000370496 KLRG1Q96E93 195 aa17.87■□□□□ 0.45
COL9A1-204ENST00000370496 HHIPL1Q96JK4 782 aa17.87■□□□□ 0.45
COL9A1-204ENST00000370496 CEP350Q5VT06 3117 aa17.87■□□□□ 0.45
COL9A1-204ENST00000370496 DDTLA6NHG4 134 aaPredicted RBP17.86■□□□□ 0.45
COL9A1-204ENST00000370496 ECE1P42892 770 aa17.86■□□□□ 0.45
COL9A1-204ENST00000370496 CYP4F22Q6NT55 531 aa17.86■□□□□ 0.45
COL9A1-204ENST00000370496 PPP4R2Q9NY27 417 aa17.86■□□□□ 0.45
COL9A1-204ENST00000370496 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.86■□□□□ 0.45
COL9A1-204ENST00000370496 SAP30BPQ9UHR5 308 aaKnown RBP17.86■□□□□ 0.45
COL9A1-204ENST00000370496 BAZ2AQ9UIF9 1905 aaKnown RBP17.85■□□□□ 0.45
COL9A1-204ENST00000370496 LAMB1P07942 1786 aa17.85■□□□□ 0.45
COL9A1-204ENST00000370496 ZNF157P51786 506 aaPredicted RBP17.85■□□□□ 0.45
COL9A1-204ENST00000370496 MAP3K11Q16584 847 aa17.85■□□□□ 0.45
COL9A1-204ENST00000370496 SLC4A8Q2Y0W8 1093 aa17.85■□□□□ 0.45
COL9A1-204ENST00000370496 TTC22Q5TAA0 569 aa17.85■□□□□ 0.45
COL9A1-204ENST00000370496 RGMBQ6NW40 437 aa17.85■□□□□ 0.45
COL9A1-204ENST00000370496 MIGA2Q7L4E1 593 aa17.85■□□□□ 0.45
COL9A1-204ENST00000370496 SH3BP5LQ7L8J4 393 aa17.85■□□□□ 0.45
COL9A1-204ENST00000370496 CAPNS2Q96L46 248 aa17.85■□□□□ 0.45
COL9A1-204ENST00000370496 WRNIP1Q96S55 665 aa17.85■□□□□ 0.45
COL9A1-204ENST00000370496 ZNF341Q9BYN7 854 aa17.85■□□□□ 0.45
COL9A1-204ENST00000370496 PUS7LQ9H0K6 701 aaKnown RBP17.85■□□□□ 0.45
COL9A1-204ENST00000370496 DOCK1Q14185 1865 aa17.84■□□□□ 0.45
COL9A1-204ENST00000370496 HLA-DOAP06340 250 aa17.84■□□□□ 0.45
COL9A1-204ENST00000370496 SDR42E1Q8WUS8 393 aa17.84■□□□□ 0.45
COL9A1-204ENST00000370496 DDRGK1Q96HY6 314 aa17.84■□□□□ 0.45
COL9A1-204ENST00000370496 TRIM34Q9BYJ4 488 aa17.84■□□□□ 0.45
COL9A1-204ENST00000370496 DHX36Q9H2U1 1008 aaKnown RBP17.84■□□□□ 0.45
COL9A1-204ENST00000370496 CSADQ9Y600 493 aa17.84■□□□□ 0.45
COL9A1-204ENST00000370496 ATAD5Q96QE3 1844 aa17.83■□□□□ 0.45
COL9A1-204ENST00000370496 M0R2C6 588 aa17.83■□□□□ 0.45
COL9A1-204ENST00000370496 GPAA1O43292 621 aa17.83■□□□□ 0.45
COL9A1-204ENST00000370496 USP2O75604 605 aaPredicted RBP17.83■□□□□ 0.45
COL9A1-204ENST00000370496 VEGFBP49765 207 aa17.83■□□□□ 0.45
COL9A1-204ENST00000370496 ANKRD13AQ8IZ07 590 aa17.83■□□□□ 0.45
COL9A1-204ENST00000370496 OSBP2Q969R2 916 aa17.83■□□□□ 0.45
COL9A1-204ENST00000370496 PALD1Q9ULE6 856 aa17.83■□□□□ 0.45
COL9A1-204ENST00000370496 SLC4A4Q9Y6R1 1079 aa17.83■□□□□ 0.45
COL9A1-204ENST00000370496 WDR33Q9C0J8 1336 aaKnown RBP17.83■□□□□ 0.44
COL9A1-204ENST00000370496 ZMYM1Q5SVZ6 1142 aa17.82■□□□□ 0.44
COL9A1-204ENST00000370496 RASAL3Q86YV0 1011 aa17.82■□□□□ 0.44
COL9A1-204ENST00000370496 CRACR2BQ8N4Y2 399 aaPredicted RBP17.82■□□□□ 0.44
COL9A1-204ENST00000370496 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
COL9A1-204ENST00000370496 CLMNQ96JQ2 1002 aa17.82■□□□□ 0.44
COL9A1-204ENST00000370496 MYH8P13535 1937 aa17.82■□□□□ 0.44
COL9A1-204ENST00000370496 PRKAB2O43741 272 aa17.81■□□□□ 0.44
COL9A1-204ENST00000370496 SLC10A3P09131 477 aa17.81■□□□□ 0.44
COL9A1-204ENST00000370496 GSPT1P15170 499 aaKnown RBP17.81■□□□□ 0.44
COL9A1-204ENST00000370496 VGLL4Q14135 290 aa17.81■□□□□ 0.44
COL9A1-204ENST00000370496 LDLRAD1Q5T700 205 aa17.81■□□□□ 0.44
COL9A1-204ENST00000370496 AMOTL1Q8IY63 956 aa17.81■□□□□ 0.44
COL9A1-204ENST00000370496 DNAJC5GQ8N7S2 189 aa17.81■□□□□ 0.44
COL9A1-204ENST00000370496 CCDC102AQ96A19 550 aa17.81■□□□□ 0.44
COL9A1-204ENST00000370496 DIAPH3Q9NSV4 1193 aa17.81■□□□□ 0.44
COL9A1-204ENST00000370496 MCM9Q9NXL9 1143 aa17.81■□□□□ 0.44
COL9A1-204ENST00000370496 PI4KBQ9UBF8 816 aa17.81■□□□□ 0.44
COL9A1-204ENST00000370496 UNCXA6NJT0 531 aa17.8■□□□□ 0.44
COL9A1-204ENST00000370496 FAM196BA6NMK8 535 aa17.8■□□□□ 0.44
COL9A1-204ENST00000370496 POLR3DP05423 398 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-204ENST00000370496 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
COL9A1-204ENST00000370496 TICAM2Q86XR7 235 aa17.8■□□□□ 0.44
COL9A1-204ENST00000370496 STRBPQ96SI9 672 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms