RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 ANTXR1Q9H6X2 564 aa17.69■□□□□ 0.42
SSR4-203ENST00000370086 CSADQ9Y600 493 aa17.69■□□□□ 0.42
SSR4-203ENST00000370086 SNCAIPQ9Y6H5 919 aa17.69■□□□□ 0.42
SSR4-203ENST00000370086 ATRNL1Q5VV63 1379 aa17.68■□□□□ 0.42
SSR4-203ENST00000370086 DDTLA6NHG4 134 aaPredicted RBP17.68■□□□□ 0.42
SSR4-203ENST00000370086 TBC1D8O95759 1140 aa17.68■□□□□ 0.42
SSR4-203ENST00000370086 ZNF112Q9UJU3 913 aa17.68■□□□□ 0.42
SSR4-203ENST00000370086 IFIT2P09913 472 aaKnown RBP17.67■□□□□ 0.42
SSR4-203ENST00000370086 SLURP2P0DP57 97 aa17.67■□□□□ 0.42
SSR4-203ENST00000370086 INPP5BP32019 993 aa17.67■□□□□ 0.42
SSR4-203ENST00000370086 INHBEP58166 350 aa17.67■□□□□ 0.42
SSR4-203ENST00000370086 SH3RF3Q8TEJ3 882 aaPredicted RBP17.67■□□□□ 0.42
SSR4-203ENST00000370086 SIPA1L1O43166 1804 aa17.66■□□□□ 0.42
SSR4-203ENST00000370086 TESPA1A2RU30 521 aaPredicted RBP17.66■□□□□ 0.42
SSR4-203ENST00000370086 SPDYE5A6NIY4 337 aa17.66■□□□□ 0.42
SSR4-203ENST00000370086 IGF2BP3O00425 579 aaKnown RBP eCLIP17.66■□□□□ 0.42
SSR4-203ENST00000370086 SMARCA5O60264 1052 aaPredicted RBP17.66■□□□□ 0.42
SSR4-203ENST00000370086 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
SSR4-203ENST00000370086 MAP4K4O95819 1239 aaPredicted RBP17.66■□□□□ 0.42
SSR4-203ENST00000370086 IFNL1Q8IU54 200 aa17.66■□□□□ 0.42
SSR4-203ENST00000370086 ZSCAN29Q8IWY8 852 aaPredicted RBP17.66■□□□□ 0.42
SSR4-203ENST00000370086 OTUD5Q96G74 571 aa17.66■□□□□ 0.42
SSR4-203ENST00000370086 MS4A4AQ96JQ5 239 aa17.66■□□□□ 0.42
SSR4-203ENST00000370086 R3HDMLQ9H3Y0 253 aa17.66■□□□□ 0.42
SSR4-203ENST00000370086 AATFQ9NY61 560 aaKnown RBP eCLIP17.66■□□□□ 0.42
SSR4-203ENST00000370086 PCDHB15Q9Y5E8 787 aa17.66■□□□□ 0.42
SSR4-203ENST00000370086 IGSF3O75054 1194 aa17.65■□□□□ 0.42
SSR4-203ENST00000370086 IDH1O75874 414 aaKnown RBP17.65■□□□□ 0.42
SSR4-203ENST00000370086 PPP4CP60510 307 aa17.65■□□□□ 0.42
SSR4-203ENST00000370086 TEX11Q8IYF3 940 aa17.65■□□□□ 0.42
SSR4-203ENST00000370086 CRBNQ96SW2 442 aa17.65■□□□□ 0.42
SSR4-203ENST00000370086 PTPN18Q99952 460 aa17.65■□□□□ 0.42
SSR4-203ENST00000370086 LRRCC1Q9C099 1032 aa17.65■□□□□ 0.42
SSR4-203ENST00000370086 DOCK1Q14185 1865 aa17.65■□□□□ 0.42
SSR4-203ENST00000370086 PHIPQ8WWQ0 1821 aa17.64■□□□□ 0.41
SSR4-203ENST00000370086 ATAD5Q96QE3 1844 aa17.64■□□□□ 0.41
SSR4-203ENST00000370086 PHF20L1A8MW92 1017 aa17.64■□□□□ 0.41
SSR4-203ENST00000370086 BAG3O95817 575 aa17.64■□□□□ 0.41
SSR4-203ENST00000370086 CYP7A1P22680 504 aa17.64■□□□□ 0.41
SSR4-203ENST00000370086 MAP3K10Q02779 954 aa17.64■□□□□ 0.41
SSR4-203ENST00000370086 ERO1BQ86YB8 467 aa17.64■□□□□ 0.41
SSR4-203ENST00000370086 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.64■□□□□ 0.41
SSR4-203ENST00000370086 NOL10Q9BSC4 688 aaKnown RBP17.64■□□□□ 0.41
SSR4-203ENST00000370086 CFHR5Q9BXR6 569 aa17.64■□□□□ 0.41
SSR4-203ENST00000370086 OSBPL5Q9H0X9 879 aaPredicted RBP17.64■□□□□ 0.41
SSR4-203ENST00000370086 DCTPP1Q9H773 170 aa17.64■□□□□ 0.41
SSR4-203ENST00000370086 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
SSR4-203ENST00000370086 MYH1P12882 1939 aa17.63■□□□□ 0.41
SSR4-203ENST00000370086 MYH7P12883 1935 aa17.63■□□□□ 0.41
SSR4-203ENST00000370086 ALDH1A1P00352 501 aa17.63■□□□□ 0.41
SSR4-203ENST00000370086 DYNLL1P63167 89 aaKnown RBP17.63■□□□□ 0.41
SSR4-203ENST00000370086 MAGEB6Q8N7X4 407 aa17.63■□□□□ 0.41
SSR4-203ENST00000370086 BRI3BPQ8WY22 251 aa17.63■□□□□ 0.41
SSR4-203ENST00000370086 GPR25O00155 361 aa17.62■□□□□ 0.41
SSR4-203ENST00000370086 IRF6O14896 467 aa17.62■□□□□ 0.41
SSR4-203ENST00000370086 GTF2A2P52657 109 aa17.62■□□□□ 0.41
SSR4-203ENST00000370086 MAP3K12Q12852 859 aa17.62■□□□□ 0.41
SSR4-203ENST00000370086 NOL9Q5SY16 702 aaKnown RBP17.62■□□□□ 0.41
SSR4-203ENST00000370086 TGFBRAP1Q8WUH2 860 aa17.62■□□□□ 0.41
SSR4-203ENST00000370086 EDC3Q96F86 508 aaKnown RBP17.62■□□□□ 0.41
SSR4-203ENST00000370086 DNAJC2Q99543 621 aaKnown RBP17.62■□□□□ 0.41
SSR4-203ENST00000370086 CCL15-CCL14A0A0B4J2E2 113 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 FAM196BA6NMK8 535 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 GOLIM4O00461 696 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 CAPN15O75808 1086 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 PLCG2P16885 1265 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 ATP5JP18859 108 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 PPATQ06203 517 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 PPIL2Q13356 520 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 TTF1Q15361 905 aaPredicted RBP17.61■□□□□ 0.41
SSR4-203ENST00000370086 CCL15Q16663 113 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 MIGA1Q8NAN2 632 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 ZNF296Q8WUU4 475 aaPredicted RBP17.61■□□□□ 0.41
SSR4-203ENST00000370086 BOLA2Q9H3K6 86 aa17.61■□□□□ 0.41
SSR4-203ENST00000370086 PTPRFP10586 1907 aa17.6■□□□□ 0.41
SSR4-203ENST00000370086 TBC1D12O60347 775 aa17.6■□□□□ 0.41
SSR4-203ENST00000370086 DGKZQ13574 1117 aa17.6■□□□□ 0.41
SSR4-203ENST00000370086 NOM1Q5C9Z4 860 aaKnown RBP17.6■□□□□ 0.41
SSR4-203ENST00000370086 MAPKAPK5Q8IW41 473 aa17.6■□□□□ 0.41
SSR4-203ENST00000370086 MCOLN1Q9GZU1 580 aa17.6■□□□□ 0.41
SSR4-203ENST00000370086 FLT1P17948 1338 aa17.6■□□□□ 0.41
SSR4-203ENST00000370086 CRHR2Q13324 411 aa17.59■□□□□ 0.41
SSR4-203ENST00000370086 OTUD7BQ6GQQ9 843 aa17.59■□□□□ 0.41
SSR4-203ENST00000370086 SCYL3Q8IZE3 742 aa17.59■□□□□ 0.41
SSR4-203ENST00000370086 FAM43AQ8N2R8 423 aa17.59■□□□□ 0.41
SSR4-203ENST00000370086 ABHD8Q96I13 439 aa17.59■□□□□ 0.41
SSR4-203ENST00000370086 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.59■□□□□ 0.41
SSR4-203ENST00000370086 CETPP11597 493 aa17.58■□□□□ 0.4
SSR4-203ENST00000370086 PDE6AP16499 860 aa17.58■□□□□ 0.4
SSR4-203ENST00000370086 SNAPC2Q13487 334 aa17.58■□□□□ 0.4
SSR4-203ENST00000370086 SLC9C2Q5TAH2 1124 aa17.58■□□□□ 0.4
SSR4-203ENST00000370086 HAUS7Q99871 368 aa17.58■□□□□ 0.4
SSR4-203ENST00000370086 PAG1Q9NWQ8 432 aa17.58■□□□□ 0.4
SSR4-203ENST00000370086 NAV1Q8NEY1 1877 aa17.58■□□□□ 0.4
SSR4-203ENST00000370086 TCRBV5S4A2TA0A5A2 114 aa17.57■□□□□ 0.4
SSR4-203ENST00000370086 CTNND1O60716 968 aaKnown RBP17.57■□□□□ 0.4
SSR4-203ENST00000370086 PTPRAP18433 802 aa17.57■□□□□ 0.4
SSR4-203ENST00000370086 RRP1BQ14684 758 aaKnown RBP17.57■□□□□ 0.4
SSR4-203ENST00000370086 TMED8Q6PL24 325 aaPredicted RBP17.57■□□□□ 0.4
SSR4-203ENST00000370086 RIOK1Q9BRS2 568 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms