RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 AMOTL1Q8IY63 956 aa16.56■□□□□ 0.24
SSR4-202ENST00000370085 TGFBRAP1Q8WUH2 860 aa16.56■□□□□ 0.24
SSR4-202ENST00000370085 CSRNP1Q96S65 589 aa16.56■□□□□ 0.24
SSR4-202ENST00000370085 TLL2Q9Y6L7 1015 aa16.56■□□□□ 0.24
SSR4-202ENST00000370085 COL2A1P02458 1487 aaPredicted RBP16.55■□□□□ 0.24
SSR4-202ENST00000370085 UNCXA6NJT0 531 aa16.55■□□□□ 0.24
SSR4-202ENST00000370085 MBD4O95243 580 aa16.55■□□□□ 0.24
SSR4-202ENST00000370085 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
SSR4-202ENST00000370085 GNAT2P19087 354 aa16.55■□□□□ 0.24
SSR4-202ENST00000370085 HUNKP57058 714 aa16.55■□□□□ 0.24
SSR4-202ENST00000370085 TTC22Q5TAA0 569 aa16.55■□□□□ 0.24
SSR4-202ENST00000370085 DLK2Q6UY11 383 aa16.55■□□□□ 0.24
SSR4-202ENST00000370085 HHIPL1Q96JK4 782 aa16.55■□□□□ 0.24
SSR4-202ENST00000370085 TEPSINQ96N21 525 aa16.55■□□□□ 0.24
SSR4-202ENST00000370085 RIOK1Q9BRS2 568 aaKnown RBP16.55■□□□□ 0.24
SSR4-202ENST00000370085 TRIM34Q9BYJ4 488 aa16.55■□□□□ 0.24
SSR4-202ENST00000370085 OSBPL5Q9H0X9 879 aaPredicted RBP16.55■□□□□ 0.24
SSR4-202ENST00000370085 FOCADQ5VW36 1801 aa16.54■□□□□ 0.24
SSR4-202ENST00000370085 FLT1P17948 1338 aa16.54■□□□□ 0.24
SSR4-202ENST00000370085 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
SSR4-202ENST00000370085 SAPCD2Q86UD0 394 aa16.54■□□□□ 0.24
SSR4-202ENST00000370085 MAPKAPK5Q8IW41 473 aa16.54■□□□□ 0.24
SSR4-202ENST00000370085 DDX4Q9NQI0 724 aaKnown RBP16.54■□□□□ 0.24
SSR4-202ENST00000370085 ATP8A2Q9NTI2 1148 aa16.54■□□□□ 0.24
SSR4-202ENST00000370085 ANGEL1Q9UNK9 670 aaKnown RBP16.54■□□□□ 0.24
SSR4-202ENST00000370085 ATRNL1Q5VV63 1379 aa16.53■□□□□ 0.24
SSR4-202ENST00000370085 CDK5RAP2Q96SN8 1893 aa16.53■□□□□ 0.24
SSR4-202ENST00000370085 ECE1P42892 770 aa16.53■□□□□ 0.24
SSR4-202ENST00000370085 MFAP1P55081 439 aaKnown RBP16.53■□□□□ 0.24
SSR4-202ENST00000370085 PRKG1Q13976 671 aa16.53■□□□□ 0.24
SSR4-202ENST00000370085 DEFB115Q30KQ5 88 aa16.53■□□□□ 0.24
SSR4-202ENST00000370085 ZNF341Q9BYN7 854 aa16.53■□□□□ 0.24
SSR4-202ENST00000370085 ARMT1Q9H993 441 aa16.53■□□□□ 0.24
SSR4-202ENST00000370085 DIAPH3Q9NSV4 1193 aa16.53■□□□□ 0.24
SSR4-202ENST00000370085 PI4KBQ9UBF8 816 aa16.53■□□□□ 0.24
SSR4-202ENST00000370085 RASSF10A6NK89 507 aa16.52■□□□□ 0.24
SSR4-202ENST00000370085 ZMYM1Q5SVZ6 1142 aa16.52■□□□□ 0.24
SSR4-202ENST00000370085 TTC6Q86TZ1 520 aa16.52■□□□□ 0.24
SSR4-202ENST00000370085 LCORLQ8N3X6 602 aa16.52■□□□□ 0.24
SSR4-202ENST00000370085 PUS7LQ9H0K6 701 aaKnown RBP16.52■□□□□ 0.24
SSR4-202ENST00000370085 HELLSQ9NRZ9 838 aa16.52■□□□□ 0.24
SSR4-202ENST00000370085 SLC4A4Q9Y6R1 1079 aa16.52■□□□□ 0.24
SSR4-202ENST00000370085 MYH1P12882 1939 aa16.52■□□□□ 0.23
SSR4-202ENST00000370085 GPAA1O43292 621 aa16.51■□□□□ 0.23
SSR4-202ENST00000370085 POLR3DP05423 398 aaPredicted RBP16.51■□□□□ 0.23
SSR4-202ENST00000370085 MAP3K11Q16584 847 aa16.51■□□□□ 0.23
SSR4-202ENST00000370085 ZFPM1Q8IX07 1006 aa16.51■□□□□ 0.23
SSR4-202ENST00000370085 ANKRD13AQ8IZ07 590 aa16.51■□□□□ 0.23
SSR4-202ENST00000370085 CRACR2BQ8N4Y2 399 aaPredicted RBP16.51■□□□□ 0.23
SSR4-202ENST00000370085 OSBP2Q969R2 916 aa16.51■□□□□ 0.23
SSR4-202ENST00000370085 CCDC102AQ96A19 550 aa16.51■□□□□ 0.23
SSR4-202ENST00000370085 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
SSR4-202ENST00000370085 HERC5Q9UII4 1024 aaKnown RBP16.51■□□□□ 0.23
SSR4-202ENST00000370085 CSADQ9Y600 493 aa16.51■□□□□ 0.23
SSR4-202ENST00000370085 UBE2Q2LH0YL09 131 aa16.5■□□□□ 0.23
SSR4-202ENST00000370085 APPP05067 770 aa16.5■□□□□ 0.23
SSR4-202ENST00000370085 SDSP20132 328 aa16.5■□□□□ 0.23
SSR4-202ENST00000370085 ZNF157P51786 506 aaPredicted RBP16.5■□□□□ 0.23
SSR4-202ENST00000370085 MCMDC2Q4G0Z9 681 aa16.5■□□□□ 0.23
SSR4-202ENST00000370085 RGMBQ6NW40 437 aa16.5■□□□□ 0.23
SSR4-202ENST00000370085 GIMAP6Q6P9H5 292 aa16.5■□□□□ 0.23
SSR4-202ENST00000370085 FOXP4Q8IVH2 680 aaPredicted RBP16.5■□□□□ 0.23
SSR4-202ENST00000370085 STRBPQ96SI9 672 aaKnown RBP16.5■□□□□ 0.23
SSR4-202ENST00000370085 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
SSR4-202ENST00000370085 TAOK2Q9UL54 1235 aa16.5■□□□□ 0.23
SSR4-202ENST00000370085 NAV1Q8NEY1 1877 aa16.5■□□□□ 0.23
SSR4-202ENST00000370085 SSC5DA1L4H1 1573 aa16.49■□□□□ 0.23
SSR4-202ENST00000370085 DDTLA6NHG4 134 aaPredicted RBP16.49■□□□□ 0.23
SSR4-202ENST00000370085 TBC1D12O60347 775 aa16.49■□□□□ 0.23
SSR4-202ENST00000370085 USP2O75604 605 aaPredicted RBP16.49■□□□□ 0.23
SSR4-202ENST00000370085 MAP3K9P80192 1104 aa16.49■□□□□ 0.23
SSR4-202ENST00000370085 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
SSR4-202ENST00000370085 MIGA2Q7L4E1 593 aa16.49■□□□□ 0.23
SSR4-202ENST00000370085 SDR42E1Q8WUS8 393 aa16.49■□□□□ 0.23
SSR4-202ENST00000370085 RUFY2Q8WXA3 655 aa16.49■□□□□ 0.23
SSR4-202ENST00000370085 SLC10A4Q96EP9 437 aa16.49■□□□□ 0.23
SSR4-202ENST00000370085 WRNIP1Q96S55 665 aa16.49■□□□□ 0.23
SSR4-202ENST00000370085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.49■□□□□ 0.23
SSR4-202ENST00000370085 DCP1AQ9NPI6 582 aaPredicted RBP16.49■□□□□ 0.23
SSR4-202ENST00000370085 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
SSR4-202ENST00000370085 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
SSR4-202ENST00000370085 PALD1Q9ULE6 856 aa16.49■□□□□ 0.23
SSR4-202ENST00000370085 M0R2C6 588 aa16.48■□□□□ 0.23
SSR4-202ENST00000370085 CHGBP05060 677 aa16.48■□□□□ 0.23
SSR4-202ENST00000370085 GSPT1P15170 499 aaKnown RBP16.48■□□□□ 0.23
SSR4-202ENST00000370085 HTRA3P83110 453 aa16.48■□□□□ 0.23
SSR4-202ENST00000370085 LDLRAD1Q5T700 205 aa16.48■□□□□ 0.23
SSR4-202ENST00000370085 SH3BP5LQ7L8J4 393 aa16.48■□□□□ 0.23
SSR4-202ENST00000370085 CDAN1Q8IWY9 1227 aa16.48■□□□□ 0.23
SSR4-202ENST00000370085 KLRG1Q96E93 195 aa16.48■□□□□ 0.23
SSR4-202ENST00000370085 PATL2C9JE40 543 aaKnown RBP16.47■□□□□ 0.23
SSR4-202ENST00000370085 TDO2P48775 406 aa16.47■□□□□ 0.23
SSR4-202ENST00000370085 GRM1Q13255 1194 aa16.47■□□□□ 0.23
SSR4-202ENST00000370085 NMIQ13287 307 aaPredicted RBP16.47■□□□□ 0.23
SSR4-202ENST00000370085 BMP2KLQ5H9B9 411 aa16.47■□□□□ 0.23
SSR4-202ENST00000370085 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
SSR4-202ENST00000370085 MOB2Q70IA6 237 aa16.47■□□□□ 0.23
SSR4-202ENST00000370085 EHD4Q9H223 541 aa16.47■□□□□ 0.23
SSR4-202ENST00000370085 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
SSR4-202ENST00000370085 SERPINB13Q9UIV8 391 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms