RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 ANKRD18BA2A2Z9 1011 aa12.52□□□□□ -0.4
LRIF1-201ENST00000369763 PRDM1O75626 825 aa12.52□□□□□ -0.4
LRIF1-201ENST00000369763 MTF1Q14872 753 aa12.52□□□□□ -0.4
LRIF1-201ENST00000369763 CABP5Q9NP86 173 aa12.52□□□□□ -0.4
LRIF1-201ENST00000369763 LZTFL1Q9NQ48 299 aa12.52□□□□□ -0.4
LRIF1-201ENST00000369763 SAMSN1Q9NSI8 373 aaKnown RBP12.52□□□□□ -0.4
LRIF1-201ENST00000369763 IMPACTQ9P2X3 320 aa12.52□□□□□ -0.4
LRIF1-201ENST00000369763 ABCF2Q9UG63 623 aa12.52□□□□□ -0.4
LRIF1-201ENST00000369763 PCDHB6Q9Y5E3 794 aa12.52□□□□□ -0.4
LRIF1-201ENST00000369763 A0A0U1RQJ8 604 aa12.52□□□□□ -0.41
LRIF1-201ENST00000369763 ETF1P62495 437 aaKnown RBP12.52□□□□□ -0.41
LRIF1-201ENST00000369763 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
LRIF1-201ENST00000369763 TOGARAM2Q6ZUX3 1019 aa12.52□□□□□ -0.41
LRIF1-201ENST00000369763 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
LRIF1-201ENST00000369763 JMYQ8N9B5 988 aa12.52□□□□□ -0.41
LRIF1-201ENST00000369763 ATRIPQ8WXE1 791 aa12.52□□□□□ -0.41
LRIF1-201ENST00000369763 WDR24Q96S15 920 aa12.52□□□□□ -0.41
LRIF1-201ENST00000369763 ISCA1Q9BUE6 129 aa12.52□□□□□ -0.41
LRIF1-201ENST00000369763 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.52□□□□□ -0.41
LRIF1-201ENST00000369763 ZCCHC17Q9NP64 241 aaKnown RBP12.52□□□□□ -0.41
LRIF1-201ENST00000369763 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.41
LRIF1-201ENST00000369763 SLFN14P0C7P3 912 aa12.52□□□□□ -0.41
LRIF1-201ENST00000369763 PTPAQ15257 358 aa12.52□□□□□ -0.41
LRIF1-201ENST00000369763 CHD2O14647 1828 aaKnown RBP12.51□□□□□ -0.41
LRIF1-201ENST00000369763 WTIPA6NIX2 430 aaPredicted RBP12.51□□□□□ -0.41
LRIF1-201ENST00000369763 TFRCP02786 760 aaKnown RBP12.51□□□□□ -0.41
LRIF1-201ENST00000369763 IL2RBP14784 551 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 KRBA2Q6ZNG9 492 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 PIGBQ92521 554 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 DHX58Q96C10 678 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 SEC31BQ9NQW1 1179 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 INTS13Q9NVM9 706 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 RIPOR2Q9Y4F9 1068 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 MORC2Q9Y6X9 1032 aaPredicted RBP12.51□□□□□ -0.41
LRIF1-201ENST00000369763 AFDNP55196 1824 aaKnown RBP12.51□□□□□ -0.41
LRIF1-201ENST00000369763 EVCP57679 992 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 ZBTB38Q8NAP3 1195 aaPredicted RBP12.51□□□□□ -0.41
LRIF1-201ENST00000369763 SDR42E1Q8WUS8 393 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 EPB41L4AQ9HCS5 686 aaPredicted RBP12.51□□□□□ -0.41
LRIF1-201ENST00000369763 FAM217BQ9NTX9 383 aaPredicted RBP12.51□□□□□ -0.41
LRIF1-201ENST00000369763 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
LRIF1-201ENST00000369763 CDKL5O76039 1030 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 BCAMP50895 628 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 IGDCC4Q8TDY8 1250 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 ZBTB1Q9Y2K1 713 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 GYS2P54840 703 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 SAFBQ15424 915 aaKnown RBP eCLIP12.5□□□□□ -0.412e-6■□□□□ 8.5
LRIF1-201ENST00000369763 TERF2Q15554 542 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 IFNL3Q8IZI9 196 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 KRI1Q8N9T8 703 aaKnown RBP12.5□□□□□ -0.41
LRIF1-201ENST00000369763 MAP3K14Q99558 947 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 SLIT3O75094 1523 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 CYP2D7A0A087X1C5 515 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 NLRP10Q86W26 655 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
LRIF1-201ENST00000369763 VPS54Q9P1Q0 977 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 PPP2R2CQ9Y2T4 447 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
LRIF1-201ENST00000369763 BAZ2BQ9UIF8 2168 aaKnown RBP12.5□□□□□ -0.41
LRIF1-201ENST00000369763 PCCAP05165 728 aaPredicted RBP12.49□□□□□ -0.41
LRIF1-201ENST00000369763 TOB1P50616 345 aaPredicted RBP12.49□□□□□ -0.41
LRIF1-201ENST00000369763 CTSWP56202 376 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 SYCP1Q15431 976 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 MFSD6Q6ZSS7 791 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 NOSTRINQ8IVI9 506 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 LCORLQ8N3X6 602 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
LRIF1-201ENST00000369763 BAG1Q99933 345 aaPredicted RBP12.49□□□□□ -0.41
LRIF1-201ENST00000369763 MAN1B1Q9UKM7 699 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 KIF20AO95235 890 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 PDE8BO95263 885 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 RASGRF1Q13972 1273 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 RESP18Q5W5W9 173 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 VSTM4Q8IW00 320 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 EPSTI1Q96J88 318 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 LRP2BPQ9P2M1 347 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 MAPK8IP1Q9UQF2 711 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 LAMA4Q16363 1823 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 POSTNQ15063 836 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 NTRK3Q16288 839 aa12.49□□□□□ -0.41
LRIF1-201ENST00000369763 NOM1Q5C9Z4 860 aaKnown RBP12.49□□□□□ -0.41
LRIF1-201ENST00000369763 PUF60Q9UHX1 559 aaKnown RBP12.49□□□□□ -0.41
LRIF1-201ENST00000369763 SOWAHDA6NJG2 315 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 TEX33O43247 280 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 STARD3NLO95772 234 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 RTN1Q16799 776 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 TRIM65Q6PJ69 517 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 TMCO3Q6UWJ1 677 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 SMARCE1Q969G3 411 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 EEF2KMTQ96G04 330 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 MPHOSPH8Q99549 860 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 JAG2Q9Y219 1238 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
LRIF1-201ENST00000369763 KIF2AO00139 706 aaPredicted RBP12.48□□□□□ -0.41
LRIF1-201ENST00000369763 REXO1L1PQ8IX06 675 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 TRIM22Q8IYM9 498 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 SPATA5Q8NB90 893 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 NOL10Q9BSC4 688 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms