RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 SRP68Q9UHB9 627 aaKnown RBP9.85□□□□□ -0.83
SFR1-201ENST00000369727 NARFQ9UHQ1 456 aa9.85□□□□□ -0.83
SFR1-201ENST00000369727 DNMT3AQ9Y6K1 912 aaPredicted RBP9.85□□□□□ -0.83
SFR1-201ENST00000369727 COL15A1P39059 1388 aa9.85□□□□□ -0.83
SFR1-201ENST00000369727 C10orf71Q711Q0 1435 aa9.85□□□□□ -0.83
SFR1-201ENST00000369727 A0A087WZG4 1122 aa9.84□□□□□ -0.83
SFR1-201ENST00000369727 DCDC2BA2VCK2 349 aa9.84□□□□□ -0.83
SFR1-201ENST00000369727 YBX3P16989 372 aaKnown RBP eCLIP9.84□□□□□ -0.83
SFR1-201ENST00000369727 EIF5P55010 431 aaKnown RBP9.84□□□□□ -0.83
SFR1-201ENST00000369727 TGFB2P61812 414 aa9.84□□□□□ -0.83
SFR1-201ENST00000369727 CLDN10P78369 228 aa9.84□□□□□ -0.83
SFR1-201ENST00000369727 NFE2L2Q16236 605 aa9.84□□□□□ -0.83
SFR1-201ENST00000369727 SLC9A9Q8IVB4 645 aa9.84□□□□□ -0.83
SFR1-201ENST00000369727 GOLGA6L1Q8N7Z2 621 aa9.84□□□□□ -0.83
SFR1-201ENST00000369727 EDARADDQ8WWZ3 215 aa9.84□□□□□ -0.83
SFR1-201ENST00000369727 MAPK8IP3Q9UPT6 1336 aa9.84□□□□□ -0.83
SFR1-201ENST00000369727 KIAA1551Q9HCM1 1747 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 KCNQ3O43525 872 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 CANXP27824 592 aaKnown RBP9.83□□□□□ -0.84
SFR1-201ENST00000369727 TM4SF1P30408 202 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 ATP1A2P50993 1020 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 DCTN1Q14203 1278 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 TAF7Q15545 349 aaPredicted RBP9.83□□□□□ -0.84
SFR1-201ENST00000369727 USPL1Q5W0Q7 1092 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 CCDC102BQ68D86 513 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 BICDL1Q6ZP65 573 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 MKRN1Q9UHC7 482 aaKnown RBP9.83□□□□□ -0.84
SFR1-201ENST00000369727 GGA1Q9UJY5 639 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 HCN2Q9UL51 889 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 GJA3Q9Y6H8 435 aa9.83□□□□□ -0.84
SFR1-201ENST00000369727 KHNYNO15037 678 aaKnown RBP9.82□□□□□ -0.84
SFR1-201ENST00000369727 SNRPA1P09661 255 aaKnown RBP9.82□□□□□ -0.84
SFR1-201ENST00000369727 MAPTP10636 758 aaKnown RBP9.82□□□□□ -0.84
SFR1-201ENST00000369727 IL6STP40189 918 aaPredicted RBP9.82□□□□□ -0.84
SFR1-201ENST00000369727 SNRPNP63162 240 aaKnown RBP9.82□□□□□ -0.84
SFR1-201ENST00000369727 TNP2Q05952 138 aa9.82□□□□□ -0.84
SFR1-201ENST00000369727 TEAD4Q15561 434 aa9.82□□□□□ -0.84
SFR1-201ENST00000369727 PNISRQ8TF01 805 aaKnown RBP9.82□□□□□ -0.84
SFR1-201ENST00000369727 PXDNLA1KZ92 1463 aa9.82□□□□□ -0.84
SFR1-201ENST00000369727 POLRMTO00411 1230 aaKnown RBP9.82□□□□□ -0.84
SFR1-201ENST00000369727 CD33P20138 364 aa9.82□□□□□ -0.84
SFR1-201ENST00000369727 NOS2P35228 1153 aa9.82□□□□□ -0.84
SFR1-201ENST00000369727 DDR1Q08345 913 aa9.82□□□□□ -0.84
SFR1-201ENST00000369727 GPAT2Q6NUI2 795 aa9.82□□□□□ -0.84
SFR1-201ENST00000369727 OGFOD1Q8N543 542 aa9.82□□□□□ -0.84
SFR1-201ENST00000369727 GLMNQ92990 594 aa9.82□□□□□ -0.84
SFR1-201ENST00000369727 PRKRIP1Q9H875 184 aaPredicted RBP9.82□□□□□ -0.84
SFR1-201ENST00000369727 ZNF232Q9UNY5 417 aa9.82□□□□□ -0.84
SFR1-201ENST00000369727 N4BP2Q86UW6 1770 aaPredicted RBP9.81□□□□□ -0.84
SFR1-201ENST00000369727 BRCA1P38398 1863 aaKnown RBP9.81□□□□□ -0.84
SFR1-201ENST00000369727 AFDNP55196 1824 aaKnown RBP9.81□□□□□ -0.84
SFR1-201ENST00000369727 KDM3BQ7LBC6 1761 aa9.81□□□□□ -0.84
SFR1-201ENST00000369727 NRXN2Q9P2S2 1712 aa9.81□□□□□ -0.84
SFR1-201ENST00000369727 NFIXQ14938 502 aa9.81□□□□□ -0.84
SFR1-201ENST00000369727 SLCO4C1Q6ZQN7 724 aa9.81□□□□□ -0.84
SFR1-201ENST00000369727 NPM2Q86SE8 214 aaKnown RBP9.81□□□□□ -0.84
SFR1-201ENST00000369727 RRAGCQ9HB90 399 aa9.81□□□□□ -0.84
SFR1-201ENST00000369727 USP16Q9Y5T5 823 aa9.81□□□□□ -0.84
SFR1-201ENST00000369727 SCN7AQ01118 1682 aa9.8□□□□□ -0.84
SFR1-201ENST00000369727 A1BGP04217 495 aa9.8□□□□□ -0.84
SFR1-201ENST00000369727 ARAFP10398 606 aa9.8□□□□□ -0.84
SFR1-201ENST00000369727 LMOD3Q0VAK6 560 aa9.8□□□□□ -0.84
SFR1-201ENST00000369727 WDR43Q15061 677 aaKnown RBP eCLIP9.8□□□□□ -0.84
SFR1-201ENST00000369727 LAMB4A4D0S4 1761 aa9.79□□□□□ -0.84
SFR1-201ENST00000369727 A0A0G2JLW4 131 aa9.79□□□□□ -0.84
SFR1-201ENST00000369727 NEURL1BA8MQ27 555 aa9.79□□□□□ -0.84
SFR1-201ENST00000369727 FAM157BP0CG42 384 aa9.79□□□□□ -0.84
SFR1-201ENST00000369727 DPEP1P16444 411 aa9.79□□□□□ -0.84
SFR1-201ENST00000369727 TMPOP42166 694 aaKnown RBP9.79□□□□□ -0.84
SFR1-201ENST00000369727 RIPK4P57078 832 aa9.79□□□□□ -0.84
SFR1-201ENST00000369727 SH3PXD2AQ5TCZ1 1133 aa9.79□□□□□ -0.84
SFR1-201ENST00000369727 LARGE2Q8N3Y3 721 aa9.79□□□□□ -0.84
SFR1-201ENST00000369727 ZNF594Q96JF6 807 aaPredicted RBP9.79□□□□□ -0.84
SFR1-201ENST00000369727 TFIP11Q9UBB9 837 aaKnown RBP9.79□□□□□ -0.84
SFR1-201ENST00000369727 ARFGEF1Q9Y6D6 1849 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 BCORQ6W2J9 1755 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 SERTM1A2A2V5 107 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 PRAMEF22A3QJZ6 481 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 PALM3A6NDB9 673 aaPredicted RBP9.78□□□□□ -0.84
SFR1-201ENST00000369727 EML1O00423 815 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 SERPINB2P05120 415 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 AMPD1P23109 780 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 SAMD5Q5TGI4 173 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 RUNDC1Q96C34 613 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 THUMPD2Q9BTF0 503 aaKnown RBP9.78□□□□□ -0.84
SFR1-201ENST00000369727 TSPAN10Q9H1Z9 355 aaPredicted RBP9.78□□□□□ -0.84
SFR1-201ENST00000369727 BABAM1Q9NWV8 329 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 MIS18AQ9NYP9 233 aa9.78□□□□□ -0.84
SFR1-201ENST00000369727 CAMTA2O94983 1202 aa9.77□□□□□ -0.85
SFR1-201ENST00000369727 EPXP11678 715 aa9.77□□□□□ -0.85
SFR1-201ENST00000369727 KCNA3P22001 575 aa9.77□□□□□ -0.85
SFR1-201ENST00000369727 EIF4A1P60842 406 aaKnown RBP9.77□□□□□ -0.85
SFR1-201ENST00000369727 LRRC69Q6ZNQ3 347 aa9.77□□□□□ -0.85
SFR1-201ENST00000369727 PIM2Q9P1W9 311 aa9.77□□□□□ -0.85
SFR1-201ENST00000369727 WWC3Q9ULE0 1092 aa9.77□□□□□ -0.85
SFR1-201ENST00000369727 MKL2Q9ULH7 1088 aa9.77□□□□□ -0.85
SFR1-201ENST00000369727 BCS1LQ9Y276 419 aa9.77□□□□□ -0.85
SFR1-201ENST00000369727 CARMIL3Q8ND23 1372 aa9.77□□□□□ -0.85
SFR1-201ENST00000369727 SFI1A8K8P3 1242 aa9.76□□□□□ -0.85
SFR1-201ENST00000369727 TBC1D9BQ66K14 1250 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms