RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 ZMYM1Q5SVZ6 1142 aa11.47□□□□□ -0.57
HIPK1-206ENST00000369559 RIC3Q7Z5B4 369 aa11.47□□□□□ -0.57
HIPK1-206ENST00000369559 NAA15Q9BXJ9 866 aaKnown RBP11.47□□□□□ -0.57
HIPK1-206ENST00000369559 RGPD8O14715 1765 aaPredicted RBP11.47□□□□□ -0.57
HIPK1-206ENST00000369559 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
HIPK1-206ENST00000369559 LRRIQ3A6PVS8 624 aaPredicted RBP11.47□□□□□ -0.57
HIPK1-206ENST00000369559 NEXNQ0ZGT2 675 aa11.47□□□□□ -0.57
HIPK1-206ENST00000369559 GCKRQ14397 625 aa11.47□□□□□ -0.57
HIPK1-206ENST00000369559 PTPAQ15257 358 aa11.47□□□□□ -0.57
HIPK1-206ENST00000369559 RAD9BQ6WBX8 426 aa11.47□□□□□ -0.57
HIPK1-206ENST00000369559 PROSER2Q86WR7 435 aaPredicted RBP11.47□□□□□ -0.57
HIPK1-206ENST00000369559 DDX21Q9NR30 783 aaKnown RBP eCLIP11.47□□□□□ -0.57
HIPK1-206ENST00000369559 HPS5Q9UPZ3 1129 aa11.47□□□□□ -0.57
HIPK1-206ENST00000369559 CTAGE15A4D2H0 777 aa11.46□□□□□ -0.57
HIPK1-206ENST00000369559 GOLIM4O00461 696 aa11.46□□□□□ -0.57
HIPK1-206ENST00000369559 CTAGE8P0CG41 777 aa11.46□□□□□ -0.57
HIPK1-206ENST00000369559 DNAJC21Q5F1R6 531 aaKnown RBP11.46□□□□□ -0.57
HIPK1-206ENST00000369559 ZNF530Q6P9A1 599 aaPredicted RBP11.46□□□□□ -0.57
HIPK1-206ENST00000369559 TADA2BQ86TJ2 420 aa11.46□□□□□ -0.57
HIPK1-206ENST00000369559 C14orf37Q86TY3 774 aa11.46□□□□□ -0.57
HIPK1-206ENST00000369559 CTAGE6Q86UF2 777 aa11.46□□□□□ -0.57
HIPK1-206ENST00000369559 CTAGE4Q8IX94 777 aa11.46□□□□□ -0.57
HIPK1-206ENST00000369559 ENOX1Q8TC92 643 aaKnown RBP11.46□□□□□ -0.57
HIPK1-206ENST00000369559 PAG1Q9NWQ8 432 aa11.46□□□□□ -0.57
HIPK1-206ENST00000369559 A0A0U1RQJ8 604 aa11.46□□□□□ -0.58
HIPK1-206ENST00000369559 PIP4K2BP78356 416 aa11.46□□□□□ -0.58
HIPK1-206ENST00000369559 FMR1Q06787 632 aaKnown RBP eCLIP11.46□□□□□ -0.587e-6■■□□□ 12.8
HIPK1-206ENST00000369559 NR1I3Q14994 352 aa11.46□□□□□ -0.58
HIPK1-206ENST00000369559 MMS22LQ6ZRQ5 1243 aa11.46□□□□□ -0.58
HIPK1-206ENST00000369559 NUTM2AQ8IVF1 878 aaPredicted RBP11.46□□□□□ -0.58
HIPK1-206ENST00000369559 ATRIPQ8WXE1 791 aa11.46□□□□□ -0.58
HIPK1-206ENST00000369559 CLIC6Q96NY7 704 aa11.46□□□□□ -0.58
HIPK1-206ENST00000369559 PLEKHA4Q9H4M7 779 aa11.46□□□□□ -0.58
HIPK1-206ENST00000369559 KCNH3Q9ULD8 1083 aa11.46□□□□□ -0.58
HIPK1-206ENST00000369559 A0A087WUV0 522 aaPredicted RBP11.45□□□□□ -0.58
HIPK1-206ENST00000369559 RNF40O75150 1001 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 WHAMMP3Q1A5X7 153 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 TTLL5Q6EMB2 1281 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 AFAP1L1Q8TED9 768 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 TEX13AQ9BXU3 409 aaPredicted RBP11.45□□□□□ -0.58
HIPK1-206ENST00000369559 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 HOOK1Q9UJC3 728 aaKnown RBP11.45□□□□□ -0.58
HIPK1-206ENST00000369559 MAST3O60307 1309 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 SART3Q15020 963 aaKnown RBP11.45□□□□□ -0.58
HIPK1-206ENST00000369559 SWT1Q5T5J6 900 aaKnown RBP11.45□□□□□ -0.58
HIPK1-206ENST00000369559 RASGRP2Q7LDG7 609 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 TICAM2Q86XR7 235 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 ELOA2Q8IYF1 753 aaPredicted RBP11.45□□□□□ -0.58
HIPK1-206ENST00000369559 MLKLQ8NB16 471 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 VIPAS39Q9H9C1 493 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 MAN1B1Q9UKM7 699 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 FOXN1O15353 648 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 AARSP49588 968 aaKnown RBP eCLIP11.45□□□□□ -0.588e-6■■■■■ 52.4
HIPK1-206ENST00000369559 EIF5P55010 431 aaKnown RBP11.45□□□□□ -0.58
HIPK1-206ENST00000369559 MDM2Q00987 491 aaPredicted RBP11.45□□□□□ -0.58
HIPK1-206ENST00000369559 MCTP2Q6DN12 878 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 WDR93Q6P2C0 686 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 TRMT44Q8IYL2 757 aaKnown RBP11.45□□□□□ -0.58
HIPK1-206ENST00000369559 SLC35F6Q8N357 371 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 MAP3K14Q99558 947 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 FAM107BQ9H098 131 aa11.45□□□□□ -0.58
HIPK1-206ENST00000369559 CCDC9Q9Y3X0 531 aaKnown RBP11.45□□□□□ -0.58
HIPK1-206ENST00000369559 A0A1B0GTH6 734 aa11.44□□□□□ -0.58
HIPK1-206ENST00000369559 RNMTO43148 476 aaKnown RBP11.44□□□□□ -0.58
HIPK1-206ENST00000369559 PRC1O43663 620 aa11.44□□□□□ -0.58
HIPK1-206ENST00000369559 TFRCP02786 760 aaKnown RBP11.44□□□□□ -0.58
HIPK1-206ENST00000369559 RAB11FIP4Q86YS3 637 aa11.44□□□□□ -0.58
HIPK1-206ENST00000369559 CTCFLQ8NI51 663 aaPredicted RBP11.44□□□□□ -0.58
HIPK1-206ENST00000369559 NAPGQ99747 312 aaPredicted RBP11.44□□□□□ -0.58
HIPK1-206ENST00000369559 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.44□□□□□ -0.58
HIPK1-206ENST00000369559 USP54Q70EL1 1684 aa11.44□□□□□ -0.58
HIPK1-206ENST00000369559 PDIA6Q15084 440 aa11.44□□□□□ -0.58
HIPK1-206ENST00000369559 PPFIBP1Q86W92 1011 aa11.44□□□□□ -0.58
HIPK1-206ENST00000369559 SAMSN1Q9NSI8 373 aaKnown RBP11.44□□□□□ -0.58
HIPK1-206ENST00000369559 PRPF6O94906 941 aaKnown RBP11.44□□□□□ -0.58
HIPK1-206ENST00000369559 SYF2O95926 243 aaKnown RBP11.44□□□□□ -0.58
HIPK1-206ENST00000369559 MMP14P50281 582 aa11.44□□□□□ -0.58
HIPK1-206ENST00000369559 MICALL1Q8N3F8 863 aa11.44□□□□□ -0.58
HIPK1-206ENST00000369559 TTF2Q9UNY4 1162 aaKnown RBP11.44□□□□□ -0.58
HIPK1-206ENST00000369559 C4AP0C0L4 1744 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 C4BP0C0L5 1744 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 RBL2Q08999 1139 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 POSTNQ15063 836 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 E2F4Q16254 413 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 NT5DC1Q5TFE4 455 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 CCDC91Q7Z6B0 441 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 ABTB2Q8N961 1025 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 NOA1Q8NC60 698 aaKnown RBP11.43□□□□□ -0.58
HIPK1-206ENST00000369559 CEP89Q96ST8 783 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 MYD88Q99836 296 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 LTN1O94822 1766 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 RNF113AO15541 343 aaKnown RBP11.43□□□□□ -0.58
HIPK1-206ENST00000369559 PLEKHO1Q53GL0 409 aaPredicted RBP11.43□□□□□ -0.58
HIPK1-206ENST00000369559 TTC39AQ5SRH9 613 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 MB21D2Q8IYB1 491 aaPredicted RBP11.43□□□□□ -0.58
HIPK1-206ENST00000369559 GPATCH11Q8N954 259 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 IGSF22Q8N9C0 903 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 AIFM3Q96NN9 605 aa11.43□□□□□ -0.58
HIPK1-206ENST00000369559 CDC5LQ99459 802 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms