RNA–Protein interactions for RNA: ENST00000368984.7

HTRA1-201, Transcript of HtrA serine peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA1, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1-201ENST00000368984 NID2Q14112 1375 aa28.68■■■□□ 2.18
HTRA1-201ENST00000368984 SART3Q15020 963 aaKnown RBP28.67■■■□□ 2.18
HTRA1-201ENST00000368984 PHKBQ93100 1093 aa28.67■■■□□ 2.18
HTRA1-201ENST00000368984 NR1I2O75469 434 aa28.67■■■□□ 2.18
HTRA1-201ENST00000368984 PROM2Q8N271 834 aa28.67■■■□□ 2.18
HTRA1-201ENST00000368984 AIFM3Q96NN9 605 aa28.67■■■□□ 2.18
HTRA1-201ENST00000368984 XDHP47989 1333 aa28.67■■■□□ 2.18
HTRA1-201ENST00000368984 RANBP6O60518 1105 aaKnown RBP28.66■■■□□ 2.18
HTRA1-201ENST00000368984 WTAPQ15007 396 aa28.66■■■□□ 2.18
HTRA1-201ENST00000368984 CAMK4Q16566 473 aa28.66■■■□□ 2.18
HTRA1-201ENST00000368984 RPGRQ92834 1020 aaKnown RBP28.66■■■□□ 2.18
HTRA1-201ENST00000368984 ALG1Q9BT22 464 aa28.66■■■□□ 2.18
HTRA1-201ENST00000368984 JAG2Q9Y219 1238 aa28.66■■■□□ 2.18
HTRA1-201ENST00000368984 BAZ2AQ9UIF9 1905 aaKnown RBP28.65■■■□□ 2.18
HTRA1-201ENST00000368984 ST5P78524 1137 aa28.65■■■□□ 2.18
HTRA1-201ENST00000368984 MAP3K11Q16584 847 aa28.65■■■□□ 2.18
HTRA1-201ENST00000368984 UVSSAQ2YD98 709 aa28.65■■■□□ 2.18
HTRA1-201ENST00000368984 CTR9Q6PD62 1173 aa28.65■■■□□ 2.18
HTRA1-201ENST00000368984 AATFQ9NY61 560 aaKnown RBP eCLIP28.65■■■□□ 2.18
HTRA1-201ENST00000368984 RTEL1Q9NZ71 1219 aa28.65■■■□□ 2.18
HTRA1-201ENST00000368984 CYP2D7A0A087X1C5 515 aa28.64■■■□□ 2.18
HTRA1-201ENST00000368984 KIF28PB7ZC32 967 aa28.64■■■□□ 2.18
HTRA1-201ENST00000368984 POLR3DP05423 398 aaPredicted RBP28.64■■■□□ 2.18
HTRA1-201ENST00000368984 IARSP41252 1262 aaKnown RBP28.64■■■□□ 2.18
HTRA1-201ENST00000368984 KIF23Q02241 960 aaPredicted RBP28.64■■■□□ 2.18
HTRA1-201ENST00000368984 TMED8Q6PL24 325 aaPredicted RBP28.64■■■□□ 2.18
HTRA1-201ENST00000368984 SYNE3Q6ZMZ3 975 aa28.64■■■□□ 2.18
HTRA1-201ENST00000368984 BRAPQ7Z569 592 aa28.64■■■□□ 2.18
HTRA1-201ENST00000368984 TMTC2Q8N394 836 aa28.64■■■□□ 2.18
HTRA1-201ENST00000368984 ESR2Q92731 530 aa28.64■■■□□ 2.18
HTRA1-201ENST00000368984 CLSTN2Q9H4D0 955 aa28.64■■■□□ 2.18
HTRA1-201ENST00000368984 ERICH2A1L162 156 aa28.64■■■□□ 2.18
HTRA1-201ENST00000368984 FGRP09769 529 aa28.64■■■□□ 2.18
HTRA1-201ENST00000368984 TDRD7Q8NHU6 1098 aaKnown RBP28.64■■■□□ 2.18
HTRA1-201ENST00000368984 TNMDQ9H2S6 317 aa28.64■■■□□ 2.18
HTRA1-201ENST00000368984 TXNRD1Q16881 649 aa28.63■■■□□ 2.17
HTRA1-201ENST00000368984 RBM43Q6ZSC3 357 aaKnown RBP28.63■■■□□ 2.17
HTRA1-201ENST00000368984 MAST2Q6P0Q8 1798 aa28.63■■■□□ 2.17
HTRA1-201ENST00000368984 DDR1Q08345 913 aa28.63■■■□□ 2.17
HTRA1-201ENST00000368984 SEC23AQ15436 765 aa28.63■■■□□ 2.17
HTRA1-201ENST00000368984 C15orf52Q6ZUT6 534 aaKnown RBP28.63■■■□□ 2.17
HTRA1-201ENST00000368984 USP17L12C9JPN9 530 aa28.62■■■□□ 2.17
HTRA1-201ENST00000368984 USP17L21D6R901 530 aa28.62■■■□□ 2.17
HTRA1-201ENST00000368984 CCDC192P0DO97 292 aa28.62■■■□□ 2.17
HTRA1-201ENST00000368984 GPSM2P81274 684 aa28.62■■■□□ 2.17
HTRA1-201ENST00000368984 MYSM1Q5VVJ2 828 aa28.62■■■□□ 2.17
HTRA1-201ENST00000368984 UBAC1Q9BSL1 405 aa28.62■■■□□ 2.17
HTRA1-201ENST00000368984 STK36Q9NRP7 1315 aa28.62■■■□□ 2.17
HTRA1-201ENST00000368984 ESPNB1AK53 854 aa28.61■■■□□ 2.17
HTRA1-201ENST00000368984 IFNAR1P17181 557 aa28.61■■■□□ 2.17
HTRA1-201ENST00000368984 SPTY2D1Q68D10 685 aaPredicted RBP28.61■■■□□ 2.17
HTRA1-201ENST00000368984 KRT40Q6A162 431 aa28.61■■■□□ 2.17
HTRA1-201ENST00000368984 CRNKL1Q9BZJ0 848 aaKnown RBP28.61■■■□□ 2.17
HTRA1-201ENST00000368984 DCP1AQ9NPI6 582 aaPredicted RBP28.61■■■□□ 2.17
HTRA1-201ENST00000368984 DUOX1Q9NRD9 1551 aa28.61■■■□□ 2.17
HTRA1-201ENST00000368984 CCDC88AQ3V6T2 1871 aa28.61■■■□□ 2.17
HTRA1-201ENST00000368984 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
HTRA1-201ENST00000368984 WDR66Q8TBY9 1149 aa28.61■■■□□ 2.17
HTRA1-201ENST00000368984 TNKSO95271 1327 aa28.6■■■□□ 2.17
HTRA1-201ENST00000368984 POLRMTO00411 1230 aaKnown RBP28.6■■■□□ 2.17
HTRA1-201ENST00000368984 RCAN1P53805 252 aa28.6■■■□□ 2.17
HTRA1-201ENST00000368984 CCAR1Q8IX12 1150 aaKnown RBP28.6■■■□□ 2.17
HTRA1-201ENST00000368984 LINC00301Q8NCQ3 95 aa28.6■■■□□ 2.17
HTRA1-201ENST00000368984 RBM17Q96I25 401 aaKnown RBP28.6■■■□□ 2.17
HTRA1-201ENST00000368984 GPR101Q96P66 508 aaPredicted RBP28.6■■■□□ 2.17
HTRA1-201ENST00000368984 POLR3EQ9NVU0 708 aa28.6■■■□□ 2.17
HTRA1-201ENST00000368984 CLIC4Q9Y696 253 aa28.6■■■□□ 2.17
HTRA1-201ENST00000368984 ECM29Q5VYK3 1845 aa28.6■■■□□ 2.17
HTRA1-201ENST00000368984 UBE2Q2LH0YL09 131 aa28.6■■■□□ 2.17
HTRA1-201ENST00000368984 FMNL1O95466 1100 aaPredicted RBP28.6■■■□□ 2.17
HTRA1-201ENST00000368984 PCP11498 1178 aaKnown RBP28.6■■■□□ 2.17
HTRA1-201ENST00000368984 SSRP1Q08945 709 aaKnown RBP28.6■■■□□ 2.17
HTRA1-201ENST00000368984 RTN1Q16799 776 aa28.6■■■□□ 2.17
HTRA1-201ENST00000368984 ATP8A2Q9NTI2 1148 aa28.6■■■□□ 2.17
HTRA1-201ENST00000368984 DZIP1Q86YF9 867 aaKnown RBP28.59■■■□□ 2.17
HTRA1-201ENST00000368984 CKAP2LQ8IYA6 745 aa28.59■■■□□ 2.17
HTRA1-201ENST00000368984 ZNF654Q8IZM8 581 aa28.59■■■□□ 2.17
HTRA1-201ENST00000368984 SLC26A6Q9BXS9 759 aa28.59■■■□□ 2.17
HTRA1-201ENST00000368984 GOLPH3LQ9H4A5 285 aa28.59■■■□□ 2.17
HTRA1-201ENST00000368984 IGSF3O75054 1194 aa28.58■■■□□ 2.17
HTRA1-201ENST00000368984 ME1P48163 572 aa28.58■■■□□ 2.17
HTRA1-201ENST00000368984 ZNF804AQ7Z570 1209 aa28.58■■■□□ 2.17
HTRA1-201ENST00000368984 PCDHA7Q9UN72 937 aa28.58■■■□□ 2.17
HTRA1-201ENST00000368984 HOXA10P31260 410 aaPredicted RBP28.58■■■□□ 2.17
HTRA1-201ENST00000368984 EVX2Q03828 476 aa28.58■■■□□ 2.17
HTRA1-201ENST00000368984 MYH2Q9UKX2 1941 aa28.58■■■□□ 2.17
HTRA1-201ENST00000368984 PRDM1O75626 825 aa28.57■■■□□ 2.16
HTRA1-201ENST00000368984 YEATS4O95619 227 aa28.57■■■□□ 2.16
HTRA1-201ENST00000368984 SNW1Q13573 536 aaKnown RBP28.57■■■□□ 2.16
HTRA1-201ENST00000368984 FANCBQ8NB91 859 aa28.57■■■□□ 2.16
HTRA1-201ENST00000368984 ZSCAN10Q96SZ4 725 aaPredicted RBP28.57■■■□□ 2.16
HTRA1-201ENST00000368984 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.57■■■□□ 2.16
HTRA1-201ENST00000368984 BBOX1O75936 387 aa28.57■■■□□ 2.16
HTRA1-201ENST00000368984 LDHBP07195 334 aaKnown RBP28.57■■■□□ 2.16
HTRA1-201ENST00000368984 TYRO3Q06418 890 aa28.57■■■□□ 2.16
HTRA1-201ENST00000368984 HS1BP3Q53T59 392 aa28.57■■■□□ 2.16
HTRA1-201ENST00000368984 NBPF11Q86T75 865 aa28.57■■■□□ 2.16
HTRA1-201ENST00000368984 ENAHQ8N8S7 591 aaPredicted RBP28.57■■■□□ 2.16
HTRA1-201ENST00000368984 KLRG2A4D1S0 409 aaPredicted RBP28.56■■■□□ 2.16
HTRA1-201ENST00000368984 ATP2B4P23634 1241 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms