RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 GCKRQ14397 625 aa12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 RABL6Q3YEC7 729 aaPredicted RBP12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 PLEKHO1Q53GL0 409 aaPredicted RBP12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 KLHDC4Q8TBB5 520 aa12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 PPM1EQ8WY54 764 aa12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 DBNDD2Q9BQY9 259 aa12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 MED4Q9NPJ6 270 aa12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 RGPD5Q99666 1765 aa12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 KIF28PB7ZC32 967 aa12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 HSPD1P10809 573 aaKnown RBP12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 DDX46Q7L014 1031 aaKnown RBP12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 DACH1Q9UI36 760 aa12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 USP21Q9UK80 565 aa12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 COL5A2P05997 1499 aaPredicted RBP12.03□□□□□ -0.48
LYSMD1-201ENST00000368908 PARP4Q9UKK3 1724 aaKnown RBP12.02□□□□□ -0.48
LYSMD1-201ENST00000368908 GUCY2CP25092 1073 aa12.02□□□□□ -0.48
LYSMD1-201ENST00000368908 PNOCQ13519 176 aa12.02□□□□□ -0.48
LYSMD1-201ENST00000368908 EPHA10Q5JZY3 1008 aa12.02□□□□□ -0.48
LYSMD1-201ENST00000368908 OTUD7BQ6GQQ9 843 aa12.02□□□□□ -0.48
LYSMD1-201ENST00000368908 METTL16Q86W50 562 aaKnown RBP12.02□□□□□ -0.48
LYSMD1-201ENST00000368908 EIF3CLB5ME19 914 aaKnown RBP12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 PTPAQ15257 358 aa12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 SHC4Q6S5L8 630 aa12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 ENOX1Q8TC92 643 aaKnown RBP12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 EIF3CQ99613 913 aaKnown RBP12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 MRPL44Q9H9J2 332 aaKnown RBP12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 GPR108Q9NPR9 543 aa12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 PAG1Q9NWQ8 432 aa12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 RAI14Q9P0K7 980 aa12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 HOOK1Q9UJC3 728 aaKnown RBP12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 FAN1Q9Y2M0 1017 aa12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 ARFGEF2Q9Y6D5 1785 aa12.02□□□□□ -0.49
LYSMD1-201ENST00000368908 CHGBP05060 677 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 PDIA6Q15084 440 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 VPS72Q15906 364 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 CCDC102BQ68D86 513 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 ISM2Q6H9L7 571 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 RIC3Q7Z5B4 369 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 PDILTQ8N807 584 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 METTL22Q9BUU2 404 aaPredicted RBP12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 TRPC5Q9UL62 973 aaPredicted RBP12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 HPS5Q9UPZ3 1129 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 MAST3O60307 1309 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 KIF5CO60282 957 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 MCM6Q14566 821 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 KARSQ15046 597 aaKnown RBP12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 WHAMMP3Q1A5X7 153 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 HSP90B2PQ58FF3 399 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 SUGP1Q8IWZ8 645 aaKnown RBP12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 MLKLQ8NB16 471 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 PNKPQ96T60 521 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 VIPAS39Q9H9C1 493 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 ABCB6Q9NP58 842 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 RGS17Q9UGC6 210 aaPredicted RBP12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 JRKLQ9Y4A0 524 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 ADGRG1Q9Y653 693 aa12.01□□□□□ -0.49
LYSMD1-201ENST00000368908 AKR1B15C9JRZ8 316 aaPredicted RBP12□□□□□ -0.49
LYSMD1-201ENST00000368908 CHRNA2Q15822 529 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 NT5DC1Q5TFE4 455 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 PACS2Q86VP3 889 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 EFCAB13Q8IY85 973 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 TRIML1Q8N9V2 468 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 FAM107BQ9H098 131 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 BTG4Q9NY30 223 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 AKAP2Q9Y2D5 859 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 NDUFB9Q9Y6M9 179 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 EP400Q96L91 3159 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 GOLGA8BA8MQT2 603 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 PPFIA4O75335 1185 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 FECHP22830 423 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 MARCKSP29966 332 aaPredicted RBP12□□□□□ -0.49
LYSMD1-201ENST00000368908 AARSP49588 968 aaKnown RBP eCLIP12□□□□□ -0.49
LYSMD1-201ENST00000368908 PDE4BQ07343 736 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 CASP8Q14790 479 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 CT47A1Q5JQC4 288 aaPredicted RBP12□□□□□ -0.49
LYSMD1-201ENST00000368908 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 LRRC31Q6UY01 552 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 MPRIPQ6WCQ1 1025 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 MB21D2Q8IYB1 491 aaPredicted RBP12□□□□□ -0.49
LYSMD1-201ENST00000368908 MAP3K14Q99558 947 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 PCDHA5Q9Y5H7 936 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 WNK3Q9BYP7 1800 aa12□□□□□ -0.49
LYSMD1-201ENST00000368908 KLF18A0A0U1RQI7 1052 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 A0A1B0GTH6 734 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 CPLX1O14810 134 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 RNF113AO15541 343 aaKnown RBP11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 ADKP55263 362 aaKnown RBP11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 MDM2Q00987 491 aaPredicted RBP11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 NR1I3Q14994 352 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 WDR93Q6P2C0 686 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 CNNM3Q8NE01 707 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 CTCFLQ8NI51 663 aaPredicted RBP11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 DESI2Q9BSY9 194 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 MYO1AQ9UBC5 1043 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 MYH7P12883 1935 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms