RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 AIMP1Q12904 312 aaKnown RBP10.77□□□□□ -0.69
TPM3-213ENST00000368545 MSS51Q4VC12 460 aa10.77□□□□□ -0.69
TPM3-213ENST00000368545 HABP4Q5JVS0 413 aaKnown RBP10.77□□□□□ -0.69
TPM3-213ENST00000368545 COPS6Q7L5N1 327 aa10.77□□□□□ -0.69
TPM3-213ENST00000368545 SKAP1Q86WV1 359 aa10.77□□□□□ -0.69
TPM3-213ENST00000368545 DCTPP1Q9H773 170 aa10.77□□□□□ -0.69
TPM3-213ENST00000368545 SNPHO15079 494 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 VARS2Q5ST30 1063 aaKnown RBP10.76□□□□□ -0.69
TPM3-213ENST00000368545 ANKRD13DQ6ZTN6 518 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 TMC7Q7Z402 723 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 CHD1LQ86WJ1 897 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 HACL1Q9UJ83 578 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 NRXN2Q9P2S2 1712 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 STARD3NLO95772 234 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 MMP16P51512 607 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 ERFEQ4G0M1 354 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 PLBD2Q8NHP8 589 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 GPR101Q96P66 508 aaPredicted RBP10.76□□□□□ -0.69
TPM3-213ENST00000368545 METTL22Q9BUU2 404 aaPredicted RBP10.76□□□□□ -0.69
TPM3-213ENST00000368545 BCL11AQ9H165 835 aa10.76□□□□□ -0.69
TPM3-213ENST00000368545 ABT1Q9ULW3 272 aaKnown RBP10.76□□□□□ -0.69
TPM3-213ENST00000368545 RASSF7Q02833 373 aa10.75□□□□□ -0.69
TPM3-213ENST00000368545 UNC93B1Q9H1C4 597 aa10.75□□□□□ -0.69
TPM3-213ENST00000368545 LRRFIP2Q9Y608 721 aaKnown RBP10.75□□□□□ -0.69
TPM3-213ENST00000368545 COL5A3P25940 1745 aaPredicted RBP10.75□□□□□ -0.69
TPM3-213ENST00000368545 SCAMP3O14828 347 aaKnown RBP10.75□□□□□ -0.69
TPM3-213ENST00000368545 ATP8B2P98198 1209 aa10.75□□□□□ -0.69
TPM3-213ENST00000368545 PTCRAQ6ISU1 281 aaPredicted RBP10.75□□□□□ -0.69
TPM3-213ENST00000368545 SH3RF1Q7Z6J0 888 aa10.75□□□□□ -0.69
TPM3-213ENST00000368545 HELQQ8TDG4 1101 aa10.75□□□□□ -0.69
TPM3-213ENST00000368545 C9orf78Q9NZ63 289 aaPredicted RBP10.75□□□□□ -0.69
TPM3-213ENST00000368545 UTYO14607 1347 aa10.74□□□□□ -0.69
TPM3-213ENST00000368545 H0YIN7 160 aa10.74□□□□□ -0.69
TPM3-213ENST00000368545 ANKRD45Q5TZF3 282 aa10.74□□□□□ -0.69
TPM3-213ENST00000368545 NBPF10Q6P3W6 841 aaKnown RBP10.74□□□□□ -0.69
TPM3-213ENST00000368545 TLL2Q9Y6L7 1015 aa10.74□□□□□ -0.69
TPM3-213ENST00000368545 PITPNM2Q9BZ72 1349 aa10.74□□□□□ -0.69
TPM3-213ENST00000368545 NEURL1BA8MQ27 555 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 GRM8O00222 908 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 USP42Q9H9J4 1324 aaKnown RBP10.73□□□□□ -0.69
TPM3-213ENST00000368545 ANKRD36CQ5JPF3 1778 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 A1BGP04217 495 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 NBPF7P0C2Y1 421 aaPredicted RBP10.73□□□□□ -0.69
TPM3-213ENST00000368545 TM4SF1P30408 202 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 PPP4CP60510 307 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 USP4Q13107 963 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 CWF19L2Q2TBE0 894 aaKnown RBP10.73□□□□□ -0.69
TPM3-213ENST00000368545 DNAJC10Q8IXB1 793 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 FAM161BQ96MY7 647 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 SPSB2Q99619 263 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 MYD88Q99836 296 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 RBCK1Q9BYM8 510 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 LNPKQ9C0E8 428 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 TAOK3Q9H2K8 898 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 COL15A1P39059 1388 aa10.73□□□□□ -0.69
TPM3-213ENST00000368545 FER1L6Q2WGJ9 1857 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 IGKV5-2P06315 115 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 PIP4K2AP48426 406 aaPredicted RBP10.72□□□□□ -0.69
TPM3-213ENST00000368545 RAD51AP2Q09MP3 1159 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 MTX1Q13505 466 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 CNTROBQ8N137 903 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 SSH3Q8TE77 659 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 PIK3R5Q8WYR1 880 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 NFKBIEO00221 500 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 PDE6BP35913 854 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 GCKRQ14397 625 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 C8orf34Q49A92 452 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
TPM3-213ENST00000368545 PCDHB11Q9Y5F2 797 aa10.72□□□□□ -0.69
TPM3-213ENST00000368545 PNMA6EA0A0J9YXQ4 647 aa10.71□□□□□ -0.69
TPM3-213ENST00000368545 POLRMTO00411 1230 aaKnown RBP10.71□□□□□ -0.69
TPM3-213ENST00000368545 CYP19A1P11511 503 aaPredicted RBP10.71□□□□□ -0.69
TPM3-213ENST00000368545 ITPK1Q13572 414 aa10.71□□□□□ -0.69
TPM3-213ENST00000368545 CCDC88AQ3V6T2 1871 aa10.71□□□□□ -0.69
TPM3-213ENST00000368545 CEP350Q5VT06 3117 aa10.71□□□□□ -0.69
TPM3-213ENST00000368545 RNF20Q5VTR2 975 aa10.71□□□□□ -0.69
TPM3-213ENST00000368545 KIF6Q6ZMV9 814 aa10.71□□□□□ -0.69
TPM3-213ENST00000368545 AMIGO3Q86WK7 504 aa10.71□□□□□ -0.69
TPM3-213ENST00000368545 CNKSR1Q969H4 720 aa10.71□□□□□ -0.69
TPM3-213ENST00000368545 TRPM7Q96QT4 1865 aa10.71□□□□□ -0.69
TPM3-213ENST00000368545 DLL1O00548 723 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 NPR3P17342 541 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 NOGQ13253 232 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 CTU1Q7Z7A3 348 aaKnown RBP10.7□□□□□ -0.7
TPM3-213ENST00000368545 SLC4A9Q96Q91 983 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 M0R2N6 131 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 TREHO43280 583 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 EPHX2P34913 555 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 PBX2P40425 430 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 HSP90AB4PQ58FF6 505 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 PPP1R42Q7Z4L9 355 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 COL26A1Q96A83 441 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 HPS5Q9UPZ3 1129 aa10.7□□□□□ -0.7
TPM3-213ENST00000368545 NUP98P52948 1817 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 SRGAP3O43295 1099 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 RAB11FIP3O75154 756 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 FAM13AO94988 1023 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 IL6STP40189 918 aaPredicted RBP10.69□□□□□ -0.7
TPM3-213ENST00000368545 FMR1Q06787 632 aaKnown RBP eCLIP10.69□□□□□ -0.7
TPM3-213ENST00000368545 TTLL7Q6ZT98 887 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms