RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SLC4A4Q9Y6R1 1079 aa16.71■□□□□ 0.27
TPM3-211ENST00000368531 CNTNAP1P78357 1384 aa16.71■□□□□ 0.27
TPM3-211ENST00000368531 BAZ2AQ9UIF9 1905 aaKnown RBP16.7■□□□□ 0.26
TPM3-211ENST00000368531 RFX7Q2KHR2 1363 aa16.7■□□□□ 0.26
TPM3-211ENST00000368531 HIP1O00291 1037 aa16.7■□□□□ 0.26
TPM3-211ENST00000368531 ITGBL1O95965 494 aaPredicted RBP16.7■□□□□ 0.26
TPM3-211ENST00000368531 CHMLP26374 656 aa16.7■□□□□ 0.26
TPM3-211ENST00000368531 SLC4A8Q2Y0W8 1093 aa16.7■□□□□ 0.26
TPM3-211ENST00000368531 CERS3Q8IU89 383 aa16.7■□□□□ 0.26
TPM3-211ENST00000368531 STRBPQ96SI9 672 aaKnown RBP16.7■□□□□ 0.26
TPM3-211ENST00000368531 IDI2Q9BXS1 227 aa16.7■□□□□ 0.26
TPM3-211ENST00000368531 HELLSQ9NRZ9 838 aa16.7■□□□□ 0.26
TPM3-211ENST00000368531 SAP30BPQ9UHR5 308 aaKnown RBP16.7■□□□□ 0.26
TPM3-211ENST00000368531 NAV1Q8NEY1 1877 aa16.69■□□□□ 0.26
TPM3-211ENST00000368531 APPP05067 770 aa16.69■□□□□ 0.26
TPM3-211ENST00000368531 MCMDC2Q4G0Z9 681 aa16.69■□□□□ 0.26
TPM3-211ENST00000368531 FKBP1CQ5VVH2 108 aa16.69■□□□□ 0.26
TPM3-211ENST00000368531 CDAN1Q8IWY9 1227 aa16.69■□□□□ 0.26
TPM3-211ENST00000368531 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
TPM3-211ENST00000368531 CDCA5Q96FF9 252 aa16.69■□□□□ 0.26
TPM3-211ENST00000368531 TRPM7Q96QT4 1865 aa16.69■□□□□ 0.26
TPM3-211ENST00000368531 ENTPD3O75355 529 aa16.68■□□□□ 0.26
TPM3-211ENST00000368531 FSTL1Q12841 308 aa16.68■□□□□ 0.26
TPM3-211ENST00000368531 NBPF12Q5TAG4 269 aaPredicted RBP16.68■□□□□ 0.26
TPM3-211ENST00000368531 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
TPM3-211ENST00000368531 FLT1P17948 1338 aa16.68■□□□□ 0.26
TPM3-211ENST00000368531 PRKG1Q13976 671 aa16.67■□□□□ 0.26
TPM3-211ENST00000368531 ZNF589Q86UQ0 364 aaPredicted RBP16.67■□□□□ 0.26
TPM3-211ENST00000368531 TICAM2Q86XR7 235 aa16.67■□□□□ 0.26
TPM3-211ENST00000368531 RUFY2Q8WXA3 655 aa16.67■□□□□ 0.26
TPM3-211ENST00000368531 OSBPL5Q9H0X9 879 aaPredicted RBP16.67■□□□□ 0.26
TPM3-211ENST00000368531 PALD1Q9ULE6 856 aa16.67■□□□□ 0.26
TPM3-211ENST00000368531 PPP2R3BQ9Y5P8 575 aa16.67■□□□□ 0.26
TPM3-211ENST00000368531 DDTLA6NHG4 134 aaPredicted RBP16.66■□□□□ 0.26
TPM3-211ENST00000368531 CELF2O95319 508 aaKnown RBP16.66■□□□□ 0.26
TPM3-211ENST00000368531 SH3BP5LQ7L8J4 393 aa16.66■□□□□ 0.26
TPM3-211ENST00000368531 TEPSINQ96N21 525 aa16.66■□□□□ 0.26
TPM3-211ENST00000368531 DCP1AQ9NPI6 582 aaPredicted RBP16.66■□□□□ 0.26
TPM3-211ENST00000368531 MCM9Q9NXL9 1143 aa16.66■□□□□ 0.26
TPM3-211ENST00000368531 FZD1Q9UP38 647 aa16.66■□□□□ 0.26
TPM3-211ENST00000368531 CCDC171Q6TFL3 1326 aa16.66■□□□□ 0.26
TPM3-211ENST00000368531 GSG1L2A8MUP6 293 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 CDC45O75419 566 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
TPM3-211ENST00000368531 POLR3DP05423 398 aaPredicted RBP16.65■□□□□ 0.26
TPM3-211ENST00000368531 SLURP2P0DP57 97 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 GNAT2P19087 354 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 NF2P35240 595 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 TTLL12Q14166 644 aaPredicted RBP16.65■□□□□ 0.26
TPM3-211ENST00000368531 SUPT20HL1Q3ZLR7 823 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 VPS53Q5VIR6 699 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 MIGA2Q7L4E1 593 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 IL25Q9H293 177 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 ATP8A2Q9NTI2 1148 aa16.65■□□□□ 0.26
TPM3-211ENST00000368531 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
TPM3-211ENST00000368531 PATL2C9JE40 543 aaKnown RBP16.64■□□□□ 0.25
TPM3-211ENST00000368531 CYP2D6P10635 497 aa16.64■□□□□ 0.25
TPM3-211ENST00000368531 TDO2P48775 406 aa16.64■□□□□ 0.25
TPM3-211ENST00000368531 CASC1Q6TDU7 716 aa16.64■□□□□ 0.25
TPM3-211ENST00000368531 CSRNP1Q96S65 589 aa16.64■□□□□ 0.25
TPM3-211ENST00000368531 PASKQ96RG2 1323 aa16.64■□□□□ 0.25
TPM3-211ENST00000368531 CYP2D7A0A087X1C5 515 aa16.63■□□□□ 0.25
TPM3-211ENST00000368531 USP17L12C9JPN9 530 aa16.63■□□□□ 0.25
TPM3-211ENST00000368531 USP17L21D6R901 530 aa16.63■□□□□ 0.25
TPM3-211ENST00000368531 MFAP1P55081 439 aaKnown RBP16.63■□□□□ 0.25
TPM3-211ENST00000368531 EVX2Q03828 476 aa16.63■□□□□ 0.25
TPM3-211ENST00000368531 CST9Q5W186 159 aa16.63■□□□□ 0.25
TPM3-211ENST00000368531 MOB2Q70IA6 237 aa16.63■□□□□ 0.25
TPM3-211ENST00000368531 IFNL3Q8IZI9 196 aa16.63■□□□□ 0.25
TPM3-211ENST00000368531 STK11IPQ8N1F8 1099 aa16.63■□□□□ 0.25
TPM3-211ENST00000368531 EPB41L4AQ9HCS5 686 aaPredicted RBP16.63■□□□□ 0.25
TPM3-211ENST00000368531 MKRN1Q9UHC7 482 aaKnown RBP16.63■□□□□ 0.25
TPM3-211ENST00000368531 SIPA1L1O43166 1804 aa16.62■□□□□ 0.25
TPM3-211ENST00000368531 FAM196BA6NMK8 535 aa16.62■□□□□ 0.25
TPM3-211ENST00000368531 MINDY4BA8MYZ0 360 aa16.62■□□□□ 0.25
TPM3-211ENST00000368531 HLA-DOAP06340 250 aa16.62■□□□□ 0.25
TPM3-211ENST00000368531 HSPD1P10809 573 aaKnown RBP16.62■□□□□ 0.25
TPM3-211ENST00000368531 ESYT1Q9BSJ8 1104 aa16.62■□□□□ 0.25
TPM3-211ENST00000368531 NACAP1Q9BZK3 213 aa16.62■□□□□ 0.25
TPM3-211ENST00000368531 NAPBQ9H115 298 aa16.62■□□□□ 0.25
TPM3-211ENST00000368531 SSC5DA1L4H1 1573 aa16.62■□□□□ 0.25
TPM3-211ENST00000368531 RPAP1Q9BWH6 1393 aaPredicted RBP16.62■□□□□ 0.25
TPM3-211ENST00000368531 DDX60LQ5H9U9 1706 aaKnown RBP16.62■□□□□ 0.25
TPM3-211ENST00000368531 SMIM22K7EJ46 135 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 FOXP2O15409 715 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 SGSM2O43147 1006 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 PLCD1P51178 756 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 CTR9Q6PD62 1173 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 TTC6Q86TZ1 520 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 CRACR2BQ8N4Y2 399 aaPredicted RBP16.61■□□□□ 0.25
TPM3-211ENST00000368531 C2orf69Q8N8R5 385 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 DHX36Q9H2U1 1008 aaKnown RBP16.61■□□□□ 0.25
TPM3-211ENST00000368531 GBA2Q9HCG7 927 aaPredicted RBP16.61■□□□□ 0.25
TPM3-211ENST00000368531 PI4KBQ9UBF8 816 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 ANGEL1Q9UNK9 670 aaKnown RBP16.61■□□□□ 0.25
TPM3-211ENST00000368531 RAD50Q92878 1312 aa16.61■□□□□ 0.25
TPM3-211ENST00000368531 ATRNL1Q5VV63 1379 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms